RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 SEPT5Q99719 369 aaPredicted RBP23.91■■□□□ 1.42
VTI1B-201ENST00000216456 MKNK1Q9BUB5 465 aa23.91■■□□□ 1.42
VTI1B-201ENST00000216456 ZCWPW1Q9H0M4 648 aa23.91■■□□□ 1.42
VTI1B-201ENST00000216456 BRD9Q9H8M2 597 aa23.91■■□□□ 1.42
VTI1B-201ENST00000216456 OLFML3Q9NRN5 406 aa23.91■■□□□ 1.42
VTI1B-201ENST00000216456 TMLHEQ9NVH6 421 aa23.91■■□□□ 1.42
VTI1B-201ENST00000216456 MORC2Q9Y6X9 1032 aaPredicted RBP23.91■■□□□ 1.42
VTI1B-201ENST00000216456 RIF1Q5UIP0 2472 aaKnown RBP23.91■■□□□ 1.42
VTI1B-201ENST00000216456 SPTLC2O15270 562 aa23.9■■□□□ 1.42
VTI1B-201ENST00000216456 ATF6P18850 670 aa23.9■■□□□ 1.42
VTI1B-201ENST00000216456 CASP1P29466 404 aa23.9■■□□□ 1.42
VTI1B-201ENST00000216456 POLR2BP30876 1174 aaKnown RBP23.9■■□□□ 1.42
VTI1B-201ENST00000216456 ALDH1A3P47895 512 aa23.9■■□□□ 1.42
VTI1B-201ENST00000216456 EPHB3P54753 998 aa23.9■■□□□ 1.42
VTI1B-201ENST00000216456 FZD5Q13467 585 aa23.9■■□□□ 1.42
VTI1B-201ENST00000216456 CCDC142Q17RM4 750 aa23.9■■□□□ 1.42
VTI1B-201ENST00000216456 SHC4Q6S5L8 630 aa23.9■■□□□ 1.42
VTI1B-201ENST00000216456 BRSK2Q8IWQ3 736 aa23.9■■□□□ 1.42
VTI1B-201ENST00000216456 C1orf127Q8N9H9 656 aa23.9■■□□□ 1.42
VTI1B-201ENST00000216456 GIPC2Q8TF65 315 aa23.9■■□□□ 1.42
VTI1B-201ENST00000216456 LRRC3BQ96PB8 259 aa23.9■■□□□ 1.42
VTI1B-201ENST00000216456 TRMT61BQ9BVS5 477 aaKnown RBP23.9■■□□□ 1.42
VTI1B-201ENST00000216456 OXCT2Q9BYC2 517 aaPredicted RBP23.9■■□□□ 1.42
VTI1B-201ENST00000216456 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.9■■□□□ 1.42
VTI1B-201ENST00000216456 HEPACAM2A8MVW5 462 aa23.89■■□□□ 1.41
VTI1B-201ENST00000216456 HCRTO43612 131 aa23.89■■□□□ 1.41
VTI1B-201ENST00000216456 ITGB3P05106 788 aa23.89■■□□□ 1.41
VTI1B-201ENST00000216456 HOXD13P35453 343 aa23.89■■□□□ 1.41
VTI1B-201ENST00000216456 PKP1Q13835 747 aa23.89■■□□□ 1.41
VTI1B-201ENST00000216456 POSTNQ15063 836 aa23.89■■□□□ 1.41
VTI1B-201ENST00000216456 MGAT5BQ3V5L5 792 aa23.89■■□□□ 1.41
VTI1B-201ENST00000216456 ADSSL1Q8N142 457 aa23.89■■□□□ 1.41
VTI1B-201ENST00000216456 SPRYD3Q8NCJ5 442 aa23.89■■□□□ 1.41
VTI1B-201ENST00000216456 CXorf38Q8TB03 319 aa23.89■■□□□ 1.41
VTI1B-201ENST00000216456 DHX58Q96C10 678 aa23.89■■□□□ 1.41
VTI1B-201ENST00000216456 PDE11AQ9HCR9 933 aa23.89■■□□□ 1.41
VTI1B-201ENST00000216456 SPATA6Q9NWH7 488 aaPredicted RBP23.89■■□□□ 1.41
VTI1B-201ENST00000216456 RBAKQ9NYW8 714 aaPredicted RBP23.89■■□□□ 1.41
VTI1B-201ENST00000216456 NDRG2Q9UN36 371 aaKnown RBP23.89■■□□□ 1.41
VTI1B-201ENST00000216456 AGAP1Q9UPQ3 857 aa23.89■■□□□ 1.41
VTI1B-201ENST00000216456 EXOC7Q9UPT5 735 aa23.89■■□□□ 1.41
VTI1B-201ENST00000216456 PCDHB13Q9Y5F0 798 aa23.89■■□□□ 1.41
VTI1B-201ENST00000216456 MIA3Q5JRA6 1907 aa23.88■■□□□ 1.41
VTI1B-201ENST00000216456 PTPRJQ12913 1337 aa23.88■■□□□ 1.41
VTI1B-201ENST00000216456 FRYLO94915 3013 aa23.88■■□□□ 1.41
VTI1B-201ENST00000216456 KPNA7A9QM74 516 aa23.88■■□□□ 1.41
VTI1B-201ENST00000216456 IL18RAPO95256 599 aa23.88■■□□□ 1.41
VTI1B-201ENST00000216456 GPR15P49685 360 aa23.88■■□□□ 1.41
VTI1B-201ENST00000216456 CYP4F8P98187 520 aa23.88■■□□□ 1.41
VTI1B-201ENST00000216456 PSMG2Q969U7 264 aa23.88■■□□□ 1.41
VTI1B-201ENST00000216456 COL4A2P08572 1712 aa23.87■■□□□ 1.41
VTI1B-201ENST00000216456 PSMC3P17980 439 aa23.87■■□□□ 1.41
VTI1B-201ENST00000216456 GABRR2P28476 465 aa23.87■■□□□ 1.41
VTI1B-201ENST00000216456 PLD1Q13393 1074 aa23.87■■□□□ 1.41
VTI1B-201ENST00000216456 SDHAF4Q5VUM1 108 aa23.87■■□□□ 1.41
VTI1B-201ENST00000216456 TSSK4Q6SA08 328 aa23.87■■□□□ 1.41
VTI1B-201ENST00000216456 ZNF687Q8N1G0 1237 aa23.87■■□□□ 1.41
VTI1B-201ENST00000216456 LEMD2Q8NC56 503 aa23.87■■□□□ 1.41
VTI1B-201ENST00000216456 TTC8Q8TAM2 541 aa23.87■■□□□ 1.41
VTI1B-201ENST00000216456 FAM200AQ8TCP9 573 aa23.87■■□□□ 1.41
VTI1B-201ENST00000216456 BCO2Q9BYV7 579 aa23.87■■□□□ 1.41
VTI1B-201ENST00000216456 SMG9Q9H0W8 520 aaKnown RBP23.87■■□□□ 1.41
VTI1B-201ENST00000216456 ATXN3LQ9H3M9 355 aa23.87■■□□□ 1.41
VTI1B-201ENST00000216456 ABI2Q9NYB9 513 aaPredicted RBP23.87■■□□□ 1.41
VTI1B-201ENST00000216456 SIX4Q9UIU6 781 aa23.87■■□□□ 1.41
VTI1B-201ENST00000216456 L1RE1Q9UN81 338 aa23.87■■□□□ 1.41
VTI1B-201ENST00000216456 FAM186AA6NE01 2351 aa23.86■■□□□ 1.41
VTI1B-201ENST00000216456 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.86■■□□□ 1.41
VTI1B-201ENST00000216456 GARTP22102 1010 aa23.86■■□□□ 1.41
VTI1B-201ENST00000216456 ACAT1P24752 427 aaKnown RBP23.86■■□□□ 1.41
VTI1B-201ENST00000216456 SOX9P48436 509 aa23.86■■□□□ 1.41
VTI1B-201ENST00000216456 OSTM1Q86WC4 334 aa23.86■■□□□ 1.41
VTI1B-201ENST00000216456 METTL23Q86XA0 190 aa23.86■■□□□ 1.41
VTI1B-201ENST00000216456 ARID3BQ8IVW6 561 aaPredicted RBP23.86■■□□□ 1.41
VTI1B-201ENST00000216456 PDCL2Q8N4E4 241 aa23.86■■□□□ 1.41
VTI1B-201ENST00000216456 KCNG4Q8TDN1 519 aa23.86■■□□□ 1.41
VTI1B-201ENST00000216456 SNX21Q969T3 373 aa23.86■■□□□ 1.41
VTI1B-201ENST00000216456 ZFYVE19Q96K21 471 aa23.86■■□□□ 1.41
VTI1B-201ENST00000216456 TRIM9Q9C026 710 aa23.86■■□□□ 1.41
VTI1B-201ENST00000216456 MTMR12Q9C0I1 747 aa23.86■■□□□ 1.41
VTI1B-201ENST00000216456 TRPV4Q9HBA0 871 aa23.86■■□□□ 1.41
VTI1B-201ENST00000216456 IL21Q9HBE4 155 aa23.86■■□□□ 1.41
VTI1B-201ENST00000216456 KBTBD4Q9NVX7 518 aa23.86■■□□□ 1.41
VTI1B-201ENST00000216456 DSEQ9UL01 958 aa23.86■■□□□ 1.41
VTI1B-201ENST00000216456 TICRRQ7Z2Z1 1910 aa23.85■■□□□ 1.41
VTI1B-201ENST00000216456 ARNTLO00327 626 aa23.85■■□□□ 1.41
VTI1B-201ENST00000216456 EXTL3O43909 919 aa23.85■■□□□ 1.41
VTI1B-201ENST00000216456 PPP6R2O75170 966 aa23.85■■□□□ 1.41
VTI1B-201ENST00000216456 PRAMEF12O95522 483 aa23.85■■□□□ 1.41
VTI1B-201ENST00000216456 POU5F1Q01860 360 aaKnown RBP23.85■■□□□ 1.41
VTI1B-201ENST00000216456 BFSP1Q12934 665 aa23.85■■□□□ 1.41
VTI1B-201ENST00000216456 SV2CQ496J9 727 aa23.85■■□□□ 1.41
VTI1B-201ENST00000216456 GPR158Q5T848 1215 aa23.85■■□□□ 1.41
VTI1B-201ENST00000216456 ZNF852Q6ZMS4 543 aa23.85■■□□□ 1.41
VTI1B-201ENST00000216456 CBWD2Q8IUF1 395 aa23.85■■□□□ 1.41
VTI1B-201ENST00000216456 MFSD6LQ8IWD5 586 aa23.85■■□□□ 1.41
VTI1B-201ENST00000216456 CCDC65Q8IXS2 484 aa23.85■■□□□ 1.41
VTI1B-201ENST00000216456 CSGALNACT2Q8N6G5 542 aa23.85■■□□□ 1.41
VTI1B-201ENST00000216456 OR5B17Q8NGF7 314 aa23.85■■□□□ 1.41
VTI1B-201ENST00000216456 DNASE1L2Q92874 299 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms