RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 CFAP61Q8NHU2 1237 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 ARHGEF26Q96DR7 871 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 CYFIP2Q96F07 1278 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 ZNF518BQ9C0D4 1074 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 NFAT5O94916 1531 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 KNDC1Q76NI1 1749 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 PIK3CDO00329 1044 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 ESRRBO95718 433 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 CXCL8P10145 99 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 PMS2P54278 862 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 AMPD2Q01433 879 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 ACAD10Q6JQN1 1059 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 TRIM65Q6PJ69 517 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 CRLF3Q8IUI8 442 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 LMNTD2Q8IXW0 634 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 TMEM199Q8N511 208 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 CHP1Q99653 195 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 SUN2Q9UH99 717 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 SLC30A1Q9Y6M5 507 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 WDR91A4D1P6 747 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 RASA4BC9J798 803 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 F5H5T6 163 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 RASA4O43374 803 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 POMCP01189 267 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 ZBTB48P10074 688 aaPredicted RBP10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 OCRLQ01968 901 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 SPARCL1Q14515 664 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 TATDN1Q6P1N9 297 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 USP33Q8TEY7 942 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 CDK5RAP1Q96SZ6 601 aaKnown RBP10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 ZNF212Q9UDV6 495 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 INTUQ9ULD6 942 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 TMEM247A6NEH6 219 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 M0QYT0 321 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 ZNF197O14709 1029 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 CTIFO43310 598 aaKnown RBP10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 AVPR1AP37288 418 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 POU5F1BQ06416 359 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 SNX19Q92543 992 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 HTATIP2Q9BUP3 242 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 FAM96AQ9H5X1 160 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 EPS15L1Q9UBC2 864 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 PLAAQ9Y263 795 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 GSTA4O15217 222 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 PLA2G6O60733 806 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 HIF1AQ16665 826 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 OVOS1Q6IE37 1185 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 NKX2-3Q8TAU0 364 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 HASPINQ8TF76 798 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 CLMNQ96JQ2 1002 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 TUBB6Q9BUF5 446 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 KRT82Q9NSB4 513 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 SLC13A4Q9UKG4 626 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 DOLKQ9UPQ8 538 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 IPPQ9Y573 584 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 MROH7Q68CQ1 1323 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 CASQ2O14958 399 aaPredicted RBP10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 FXR1P51114 621 aaKnown RBP eCLIP10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 KPNA1P52294 538 aaPredicted RBP10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 TMPRSS15P98073 1019 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 CDR2Q01850 454 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 TWF1Q12792 350 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 IMPG1Q17R60 797 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 FAM110CQ1W6H9 321 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 SYTL3Q4VX76 610 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 THEMIS2Q5TEJ8 643 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 CXCL17Q6UXB2 119 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 KDELC2Q7Z4H8 507 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 WDR75Q8IWA0 830 aaKnown RBP10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 TRAPPC12Q8WVT3 735 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 SUDS3Q9H7L9 328 aaPredicted RBP10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 ABCB6Q9NP58 842 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 GTF3C4Q9UKN8 822 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 HPSEQ9Y251 543 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 CSDE1O75534 798 aaKnown RBP10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 RALBP11234 206 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 PRKAR2AP13861 404 aaKnown RBP10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 PON1P27169 355 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 SOX10P56693 466 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 PSMC6P62333 389 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 MRPS25P82663 173 aaKnown RBP10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 EPC2Q52LR7 807 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 MTHFD1LQ6UB35 978 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 C4orf22Q6V702 233 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 SCFD1Q8WVM8 642 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 USP13Q92995 863 aaPredicted RBP10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 TTC17Q96AE7 1141 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 RPRD1AQ96P16 312 aaPredicted RBP10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 AGAP3Q96P47 875 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 ZFATQ9P243 1243 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 PCDHB5Q9Y5E4 795 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 NFASCO94856 1347 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 TXNDC9O14530 226 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 CYTH3O43739 400 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 DNAJB2P25686 324 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 EPHB2P29323 1055 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 AKT1P31749 480 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 SESN2P58004 480 aaPredicted RBP10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 CASP8Q14790 479 aa10.85□□□□□ -0.67
NIPAL3-201ENST00000003912 TBC1D19Q8N5T2 526 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms