RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Apol11aE9PZG0 334 aa27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Sec24cG3X972 1096 aaKnown RBP27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Vmn2r1O70410 912 aa27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Rpl7aP12970 266 aaKnown RBP27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Ndufaf2Q59J78 168 aa27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Zbtb17Q60821 794 aa27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Ntrk3Q6VNS1 825 aa27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Dmtf1Q8CE22 761 aa27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 UvragQ8K245 698 aa27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Rabl3Q9D4V7 236 aa27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Asah2Q9JHE3 756 aa27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Lztfl1Q9JHQ5 299 aa27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Bpifb9bA2AJD1 591 aa27.26■■□□□ 1.95
Tpm1-216ENSMUST00000113707 DgkiD3YWQ0 1071 aa27.26■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Usp4P35123 962 aa27.26■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Ccdc57Q6PHN1 1016 aa27.26■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Fnbp1Q80TY0 616 aa27.26■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Bpifb9aQ80XI7 591 aa27.26■■□□□ 1.95
Tpm1-216ENSMUST00000113707 SowahaQ8BLS7 548 aa27.26■■□□□ 1.95
Tpm1-216ENSMUST00000113707 H2-Q4Q8HWB2 354 aa27.26■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Btbd6Q8K2J9 488 aa27.26■■□□□ 1.95
Tpm1-216ENSMUST00000113707 DpysQ9EQF5 519 aa27.26■■□□□ 1.95
Tpm1-216ENSMUST00000113707 CtsfQ9R013 462 aa27.26■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Arih2Q9Z1K6 492 aa27.26■■□□□ 1.95
Tpm1-216ENSMUST00000113707 0610012G03RikA0A0J9YTR2 95 aa27.25■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Ano7Q14AT5 859 aa27.25■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Znf865Q3U3I9 1058 aa27.25■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Nlrc4Q3UP24 1024 aa27.25■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Aste1Q8BIR2 672 aa27.25■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Mageb18Q8BQR7 327 aa27.25■■□□□ 1.95
Tpm1-216ENSMUST00000113707 ParvaQ9EPC1 372 aa27.25■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Extl1Q9JKV7 669 aa27.25■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Gm4302E9PX25 294 aa27.25■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Pcsk1P63239 753 aa27.25■■□□□ 1.95
Tpm1-216ENSMUST00000113707 ZufspQ3T9Z9 577 aa27.25■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Cyp2j11Q3UNV2 504 aa27.25■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Retreg2Q6NS82 541 aa27.25■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Ttc22Q8C159 568 aa27.25■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Olfr1494Q8VGP8 315 aa27.25■■□□□ 1.95
Tpm1-216ENSMUST00000113707 FcrlaQ920A9 352 aa27.25■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Cyp39a1Q9JKJ9 470 aa27.25■■□□□ 1.95
Tpm1-216ENSMUST00000113707 ThadaA8C756 1938 aa27.24■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Olfr391-psA0A0U1RNJ4 312 aa27.24■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Itgb3O54890 787 aa27.24■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Gnrh1P13562 90 aa27.24■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Frg1P97376 258 aaKnown RBP27.24■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Six1Q62231 284 aa27.24■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Gm5622Q810Q0 167 aa27.24■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Wdr35Q8BND3 1181 aa27.24■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Kctd15Q8K0E1 283 aa27.24■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Mcoln2Q8K595 566 aa27.24■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Smg8Q8VE18 991 aa27.24■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Dpp3Q99KK7 738 aa27.24■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Nxnl2Q9D531 156 aa27.24■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Zfp882E9Q4R4 555 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Prdx5P99029 210 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 GscQ02591 256 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Ccdc114Q3UX62 658 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Elf1Q60775 612 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Zbed4Q80WQ9 1168 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Trim6Q8BGE7 488 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Pak4Q8BTW9 593 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Slc9a4Q8BUE1 797 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Q8CD60 292 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Gpc3Q8CFZ4 579 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Q9CQC3 228 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Fam212aQ9CX62 282 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 DmtnQ9WV69 405 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Rasal2E9PW37 1286 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 2010300C02RikE9Q3M9 1175 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Akr1b10G5E895 316 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Psmc1P62192 440 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Ccdc85aQ5SP85 500 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 FntaQ61239 377 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 MogsQ80UM7 834 aaKnown RBP27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Q8CCC3 530 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Dact1Q8R4A3 778 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 PawrQ925B0 333 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 B4galt4Q9JJ04 344 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Sfmbt1Q9JMD1 863 aa27.23■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Mxi1P50540 228 aa27.22■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Fermt1P59113 677 aa27.22■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Has1Q61647 583 aa27.22■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Tcaf3Q6QR59 914 aa27.22■■□□□ 1.95
Tpm1-216ENSMUST00000113707 PhkbQ7TSH2 1085 aa27.22■■□□□ 1.95
Tpm1-216ENSMUST00000113707 March4Q80TE3 409 aa27.22■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Micall1Q8BGT6 870 aa27.22■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Kdm1bQ8CIG3 826 aa27.22■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Adgrg2Q8CJ12 1009 aa27.22■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Gga1Q8R0H9 635 aa27.22■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Mms19Q9D071 1031 aa27.22■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Calr3Q9D9Q6 380 aa27.22■■□□□ 1.95
Tpm1-216ENSMUST00000113707 PlekQ9JHK5 350 aaKnown RBP27.22■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Krt17Q9QWL7 433 aa27.22■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Mindy4b-psA0A1W2P7H6 457 aa27.21■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Lmod3E9QA62 571 aa27.21■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Top6blJ3QMY9 579 aa27.21■■□□□ 1.95
Tpm1-216ENSMUST00000113707 TnfP06804 235 aa27.21■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Foxp2P58463 714 aa27.21■■□□□ 1.95
Tpm1-216ENSMUST00000113707 Gabrb2P63137 512 aa27.21■■□□□ 1.95
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms