RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Tas2r109Q7M707 316 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ell3Q80VR2 395 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ppp1r3eQ8BRJ4 279 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 PreplQ8C167 725 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 HyiQ8R1F5 277 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ddx39aQ8VDW0 427 aaKnown RBP9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Fam192aQ91WE2 254 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Tspan1Q99J59 240 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Dhrs4Q99LB2 279 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Bicc1Q99MQ1 977 aaKnown RBP9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Fam213aQ9CYH2 218 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Nup50Q9JIH2 466 aaKnown RBP9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Prss30Q9QYZ9 310 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Med20Q9R0X0 212 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Tubd1Q9R1K7 455 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Gm11983V9GXS8 105 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 CtcflA2APF3 636 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Gm14525B1AZA0 212 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Gm2030D3Z7C4 212 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Adgrf2E9Q4J9 644 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Pira2F8VQ94 680 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Trim55G3X8Y1 545 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 2610008E11RikG3X964 669 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Gm6351K9J7D1 481 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Gm13128L7MU96 475 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Slc1a6O35544 561 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Eef1bO70251 225 aaKnown RBP9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Magea6O89010 325 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Prim1P20664 417 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 CrklP47941 303 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Nat8lQ3UGX3 299 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Drc1Q3USS3 753 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Grm5Q3UVX5 1203 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Gnat3Q3V3I2 354 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Cacna2d4Q5RJF7 1116 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Mapk10Q61831 464 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ddx3xQ62167 662 aaKnown RBP9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Q6DIA7 600 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Usp50Q6P8X6 390 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 SyncripQ7TMK9 623 aaKnown RBP9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ubxn10Q8BG34 277 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Q8BGA7 448 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Clic6Q8BHB9 596 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Tbc1d10bQ8BHL3 798 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Golim4Q8BXA1 655 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Myef2Q8C854 591 aaKnown RBP9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Bag5Q8CI32 447 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 RhoqQ8R527 205 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Smyd2Q8R5A0 433 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Stk38Q91VJ4 465 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Cabp7Q91ZM8 215 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Tex13bQ99MW5 186 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ebag9Q9D0V7 213 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Mrps25Q9D125 171 aaKnown RBP9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Taf7lQ9D3R9 471 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Alg13Q9D8C3 1166 aaKnown RBP9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Tm9sf3Q9ET30 587 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Sh2b2Q9JID9 621 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Rabgef1Q9JM13 491 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ly75Q60767 1723 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Akap11E9Q777 1895 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Map3k15A2AQW0 1331 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Prdm12A2AJ77 365 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Gm3636E9Q5P1 227 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Sptbn5F6UCX4 1208 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Wnt5aP22725 380 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Il15P48346 162 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 ZufspQ3T9Z9 577 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Q3UK37 420 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Kctd21Q3URF8 260 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Pdp2Q504M2 532 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 HiraQ61666 1015 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Adam26bQ6IMH6 699 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Senp6Q6P7W0 1132 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ccdc85bQ6PDY0 202 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Olfr813Q7TRH5 310 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 SgczQ8BX51 311 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Plcg2Q8CIH5 1265 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Coq6Q8R1S0 476 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Angel1Q8VCU0 667 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Dennd2dQ91VV4 469 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Pcdhb3Q91XZ7 784 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Eaf2Q91ZD6 262 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Cyp4f13Q99N19 523 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Q9CRW3 126 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Creld2Q9CYA0 350 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ribc1Q9D0B8 379 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 PgcQ9D7R7 392 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 FancaQ9JL70 1439 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Clec4eQ9R0Q8 214 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Xlr4aA2BI40 215 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Birc5O70201 140 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Nfkbil1O88995 381 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Fgfr1P16092 822 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Dnm2P39054 870 aaKnown RBP9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Cetn1P41209 172 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Lrig1P70193 1091 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 HelqQ2VPA6 1069 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Pls1Q3V0K9 630 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Samhd1Q60710 627 aa9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms