RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Foxp2P58463 714 aa16.34■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Cyp2e1Q05421 493 aa16.34■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Rbm20Q3UQS8 1199 aaKnown RBP16.34■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Luzp2Q8BGY3 345 aa16.34■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Ldlrap1Q8C142 308 aa16.34■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Prr33Q8C494 260 aa16.34■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Mb21d2Q8C525 428 aa16.34■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Spata32Q8C5V0 334 aa16.34■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Smtnl2Q8CI12 456 aa16.34■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Cd248Q91V98 765 aa16.34■□□□□ 0.21
Ubr3-201ENSMUST00000055758 CbsQ91WT9 561 aa16.34■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Mettl13Q91YR5 698 aa16.34■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Atp5oQ9DB20 213 aaKnown RBP16.34■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Scp2P32020 547 aaKnown RBP16.34■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Cyp4x1Q6A152 507 aa16.34■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Wnk4Q80UE6 1222 aa16.34■□□□□ 0.21
Ubr3-201ENSMUST00000055758 ChfrQ810L3 664 aa16.34■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Q8C6G1 249 aa16.34■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Hspbp1Q99P31 357 aaKnown RBP16.34■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Mrpl11Q9CQF0 192 aaKnown RBP16.34■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Abcc2Q8VI47 1543 aa16.34■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Mark2Q05512 776 aa16.33■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Shcbp1lQ3TTP0 639 aa16.33■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Cspg5Q71M36 566 aa16.33■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Gtf2h3Q8VD76 309 aa16.33■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Mrpl4Q9DCU6 294 aaKnown RBP16.33■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Phtf1Q9QZ09 761 aa16.33■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Tbkbp1A2A9T0 611 aa16.33■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Gm5592Q3V0A6 857 aa16.33■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Olfr301Q7TS04 311 aa16.33■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Dapk2Q8VDF3 370 aa16.33■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Neu2Q9JMH3 379 aa16.33■□□□□ 0.21
Ubr3-201ENSMUST00000055758 Olfr1354E9Q5G9 310 aa16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Enoph1Q8BGB7 257 aa16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Gucy1b2Q8BXH3 824 aa16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Serpini2Q9JK88 405 aa16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Entpd5Q9WUZ9 427 aa16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Lamc3Q9R0B6 1581 aa16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 2210016F16RikG3X8U3 338 aa16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Tpst1O70281 370 aa16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 LvrnQ2KHK3 559 aa16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Nr2c1Q505F1 590 aa16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Ddr2Q62371 854 aa16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Vps11Q91W86 941 aaKnown RBP16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Fam192aQ91WE2 254 aa16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Nkd1Q99MH6 471 aa16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Eif2ak4Q9QZ05 1648 aa16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Cct8P42932 548 aa16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Ccna2P51943 422 aaKnown RBP16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Ccdc51Q3URS9 406 aa16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Trpc7Q9WVC5 862 aa16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Col17a1Q07563 1470 aa16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 A0A1Y7VIU7 259 aa16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 SftpdP50404 374 aa16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Brd9Q3UQU0 596 aaKnown RBP16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Dcaf15Q6PFH3 600 aa16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Kiaa0391Q8JZY4 584 aaKnown RBP16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Rnf123Q5XPI3 1314 aa16.33■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Mfn2Q80U63 757 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Slitrk2Q810C0 846 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Usp1Q8BJQ2 784 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 EngaseQ8BX80 734 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Spice1Q8C804 860 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 CtsfQ9R013 462 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Eif2s3xQ9Z0N1 472 aaKnown RBP16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Eif2s3yQ9Z0N2 472 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Rfx8D3YU81 596 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Eps8Q08509 821 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 TbcelQ8C5W3 424 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Vmn1r191Q8K4D0 298 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Erich3F6QRE9 1637 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Atf5O70191 283 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Eif3dO70194 548 aaKnown RBP16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Atp9aO70228 1047 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Krt6aP50446 553 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Ugp2Q91ZJ5 508 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Ncam1P13595 1115 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Scn3bQ8BHK2 215 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Appl1Q8K3H0 707 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Cyp2s1Q9DBX6 501 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Ggps1Q9WTN0 300 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Gm10406A6NAS4 205 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Gm3373A6NAS7 205 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Gm3298E9PW80 205 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Gm3667K7N757 205 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Lrrc4bP0C192 709 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Hspa9P38647 679 aaKnown RBP16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Pdap1Q3UHX2 181 aaKnown RBP16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Garnl3Q3V0G7 1038 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Gm3558Q5FWC9 205 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 SnrpaQ62189 287 aaKnown RBP16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Ints2Q80UK8 1198 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 PodxlQ9R0M4 503 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Gm29554A0A087WNW4 188 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Ankfn1A0A140LIW7 1083 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 F830016B08RikG3UWE2 416 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 StilQ60988 1262 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Rexo4Q6PAQ4 432 aaKnown RBP16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Frmd4aQ8BIE6 1020 aa16.32■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Q8C1R3 189 aa16.32■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms