RNA–Protein interactions for RNA: ENSMUST00000020827.6

Rnft1-201, Transcript of E3 ubiquitin-protein ligase RNFT1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnft1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1-201ENSMUST00000020827 Sec23ipQ6NZC7 998 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Xlr3bQ6P205 226 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 C6.1alQ7M757 291 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 SnphQ80U23 495 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Zscan4cQ80VJ6 506 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Crybg3Q80W49 1005 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Rsad2Q8CBB9 362 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Acvr1cQ8K348 493 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Calml4Q91WQ9 153 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Ubxn2aQ99KJ0 258 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Ttc33Q9D6K7 262 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Hs6st3Q9QYK4 470 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Tnfsf13bQ9WU72 309 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Zfc3h1B2RT41 1992 aaKnown RBP10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Ank3G5E8K5 1961 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Ighv11-2A0A075B5R8 117 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Sh3pxd2bA2AAY5 908 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Eftud2O08810 971 aaKnown RBP10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Hnrnph1O35737 449 aaKnown RBP10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 IapP03975 557 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Lmo2P25801 158 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Slc1a2P43006 572 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Mybl1P51960 751 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Tmem120bQ3TA38 339 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 HnrnpdQ60668 355 aaKnown RBP10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Rassf2Q8BMS9 326 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 DnerQ8JZM4 737 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Ints9Q8K114 658 aaKnown RBP10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Fam151aQ8QZW3 608 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Taf7lQ9D3R9 471 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Cpsf3Q9QXK7 684 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Dnajb7Q9QYI8 312 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Celsr3Q91ZI0 3301 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 2210011C24RikA0A087WQ89 206 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Zfp715G3X9T1 886 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Serpina1bP22599 413 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Ercc5P35689 1170 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Serpina1cQ00896 412 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Serpina1dQ00897 413 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Clul1Q3ZRW6 464 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Pkn3Q8K045 878 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Nup58Q8R332 587 aa10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Slc25a11Q9CR62 314 aaKnown RBP10.52□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Mmrn1B2RPV6 1210 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Ism2D3Z6A3 493 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 PtproE9Q612 1226 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Gm17535J3KMR8 224 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Irf8P23611 424 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Arf4P61750 180 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Sox13Q04891 613 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Nlrp14Q6B966 993 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 NostrinQ6WKZ7 506 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Ece2Q80Z60 881 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Caskin2Q8VHK1 1201 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Rpn1Q91YQ5 608 aaKnown RBP10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Pkp2Q9CQ73 795 aaKnown RBP10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Six6os1Q9CTN5 574 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Tubgcp4Q9D4F8 667 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Tbx20Q9ES03 445 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Arid2E9Q7E2 1828 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Myo7aP97479 2215 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Lrrc63A6H694 637 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Gm5795E9PZN8 263 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 PtpreP49446 699 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Sesn2P58043 480 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Zscan2Q07230 614 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Plppr4Q7TME0 766 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Trpm4Q7TN37 1213 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Slitrk1Q810C1 696 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Mill1Q8HWE7 395 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Llcfc1Q9D9P8 108 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 PigoQ9JJI6 1093 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Cul1Q9WTX6 776 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Hsd17b14E9Q3D4 273 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Dusp8O09112 663 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 NsfP46460 744 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 SftpbP50405 377 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Adcy8P97490 1249 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 GsapQ3TCV3 858 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Znf746Q3U133 652 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Tdrd5Q5VCS6 1040 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Zdhhc18Q5Y5T2 380 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Ppm1kQ8BXN7 372 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 BlmhQ8R016 455 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Ier5lQ99J55 406 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Ino80bQ99PT3 375 aaKnown RBP10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Gtf2h1Q9DBA9 547 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Rbp7Q9EPC5 134 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Stat2Q9WVL2 923 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Arih1Q9Z1K5 555 aa10.51□□□□□ -0.73
Rnft1-201ENSMUST00000020827 AmhP27106 555 aa10.5□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Fbln2P37889 1221 aa10.5□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Oas1fQ14AZ4 364 aa10.5□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Mbtd1Q6P5G3 631 aa10.5□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Wasf2Q8BH43 497 aa10.5□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Efl1Q8C0D5 1127 aa10.5□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Xpo5Q924C1 1204 aaKnown RBP10.5□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Xpo6Q924Z6 1125 aa10.5□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Dok4Q99KE3 325 aa10.5□□□□□ -0.73
Rnft1-201ENSMUST00000020827 Usp26Q99MX1 835 aa10.5□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms