RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 CIN5P40917 295 aa-0.92□□□□□ -2.56
snR49snR49 YFR035CP43608 114 aa-0.92□□□□□ -2.56
snR49snR49 FIP1P45976 327 aa-0.92□□□□□ -2.56
snR49snR49 AIM25P47140 327 aa-0.92□□□□□ -2.56
snR49snR49 PRM8P53174 237 aa-0.92□□□□□ -2.56
snR49snR49 NOP19P53317 196 aaPredicted RBP-0.92□□□□□ -2.56
snR49snR49 YMR295CQ03559 197 aa-0.92□□□□□ -2.56
snR49snR49 YLR173WQ06247 608 aa-0.92□□□□□ -2.56
snR49snR49 VAM10Q08474 114 aa-0.92□□□□□ -2.56
snR49snR49 SNU23Q12368 194 aaPredicted RBP-0.92□□□□□ -2.56
snR49snR49 DGK1Q12382 290 aa-0.92□□□□□ -2.56
snR49snR49 RIF1P29539 1916 aa-0.93□□□□□ -2.56
snR49snR49 DRS2P39524 1355 aa-0.93□□□□□ -2.56
snR49snR49 COX2P00410 251 aa-0.93□□□□□ -2.56
snR49snR49 URA5P13298 226 aaKnown RBP-0.93□□□□□ -2.56
snR49snR49 DBP3P20447 523 aaKnown RBP-0.93□□□□□ -2.56
snR49snR49 BUB2P26448 306 aaPredicted RBP-0.93□□□□□ -2.56
snR49snR49 IDH1P28834 360 aaKnown RBP RIP-Chip data-0.93□□□□□ -2.56not detected
snR49snR49 APS1P35181 156 aa-0.93□□□□□ -2.56
snR49snR49 YKL075CP36083 450 aa-0.93□□□□□ -2.56
snR49snR49 YBR027CP38220 110 aa-0.93□□□□□ -2.56
snR49snR49 RTR1P40084 226 aaPredicted RBP-0.93□□□□□ -2.56
snR49snR49 SGF11Q03067 99 aa-0.93□□□□□ -2.56
snR49snR49 RRP17Q04031 235 aaPredicted RBP-0.93□□□□□ -2.56
snR49snR49 MDY2Q12285 212 aa-0.93□□□□□ -2.56
snR49snR49 TDA8Q6B2U8 126 aa-0.93□□□□□ -2.56
snR49snR49 YIL177CP40434 1758 aa-0.93□□□□□ -2.56
snR49snR49 YJL225CP40889 1758 aa-0.93□□□□□ -2.56
snR49snR49 YLR422WQ06409 1932 aa-0.93□□□□□ -2.56
snR49snR49 SEC16P48415 2195 aaKnown RBP-0.94□□□□□ -2.56
snR49snR49 YCR023CP25351 611 aa-0.94□□□□□ -2.56
snR49snR49 RME1P32338 300 aaKnown RBP-0.94□□□□□ -2.56
snR49snR49 TCA17P32613 152 aa-0.94□□□□□ -2.56
snR49snR49 NSE4P43124 402 aa-0.94□□□□□ -2.56
snR49snR49 GPI14P47088 403 aaKnown RBP-0.94□□□□□ -2.56
snR49snR49 YJR149WP47177 404 aa-0.94□□□□□ -2.56
snR49snR49 SBH2P52871 88 aa-0.94□□□□□ -2.56
snR49snR49 PDR17P53844 350 aa-0.94□□□□□ -2.56
snR49snR49 YNL134CP53912 376 aaKnown RBP-0.94□□□□□ -2.56
snR49snR49 YNL033WP53964 284 aa-0.94□□□□□ -2.56
snR49snR49 YDR249CQ03787 373 aa-0.94□□□□□ -2.56
snR49snR49 YLR194CQ05777 254 aa-0.94□□□□□ -2.56
snR49snR49 GGA1Q06336 557 aa-0.94□□□□□ -2.56
snR49snR49 RRP36Q12481 300 aaPredicted RBP-0.94□□□□□ -2.56
snR49snR49 SRB4P32569 687 aa-0.95□□□□□ -2.56
snR49snR49 GSP2P32836 220 aaKnown RBP-0.95□□□□□ -2.56
snR49snR49 PTM1P32857 523 aa-0.95□□□□□ -2.56
snR49snR49 NSG1P38837 291 aa-0.95□□□□□ -2.56
snR49snR49 CCS1P40202 249 aaKnown RBP-0.95□□□□□ -2.56
snR49snR49 RFC2P40348 353 aa-0.95□□□□□ -2.56
snR49snR49 POR2P40478 281 aa-0.95□□□□□ -2.56
snR49snR49 BXI1P48558 297 aa-0.95□□□□□ -2.56
snR49snR49 GPI17Q04080 534 aa-0.95□□□□□ -2.56
snR49snR49 YHP1Q04116 353 aa-0.95□□□□□ -2.56
snR49snR49 COX20Q04935 205 aa-0.95□□□□□ -2.56
snR49snR49 BTS1Q12051 335 aa-0.95□□□□□ -2.56
snR49snR49 REX3Q12090 404 aa-0.95□□□□□ -2.56
snR49snR49 YOR015WQ12169 119 aa-0.95□□□□□ -2.56
snR49snR49 UTP20P35194 2493 aaKnown RBP-0.95□□□□□ -2.56
snR49snR49 CDC39P25655 2108 aaKnown RBP-0.95□□□□□ -2.56
snR49snR49 RPL24AP04449 155 aaKnown RBP-0.96□□□□□ -2.56
snR49snR49 RPB3P16370 318 aaKnown RBP-0.96□□□□□ -2.56
snR49snR49 PRE1P22141 198 aaKnown RBP-0.96□□□□□ -2.56
snR49snR49 MAK31P23059 88 aa-0.96□□□□□ -2.56
snR49snR49 RPL24BP24000 155 aaKnown RBP-0.96□□□□□ -2.56
snR49snR49 PDS1P40316 373 aaPredicted RBP-0.96□□□□□ -2.56
snR49snR49 GLC8P41818 229 aa-0.96□□□□□ -2.56
snR49snR49 YJL009WP47078 108 aa-0.96□□□□□ -2.56
snR49snR49 DIE2P50076 525 aa-0.96□□□□□ -2.56
snR49snR49 YPR127WQ06494 345 aa-0.96□□□□□ -2.56
snR49snR49 YNG1Q08465 219 aa-0.96□□□□□ -2.56
snR49snR49 YDR010CQ12426 110 aa-0.96□□□□□ -2.56
snR49snR49 YMR030W-AQ3E760 96 aa-0.96□□□□□ -2.56
snR49snR49 LSO2Q3E772 92 aaKnown RBP-0.96□□□□□ -2.56
snR49snR49 CMC4Q3E7A9 73 aa-0.96□□□□□ -2.56
snR49snR49 UBR1P19812 1950 aa-0.97□□□□□ -2.56
snR49snR49 TIR1P10863 254 aa-0.97□□□□□ -2.56
snR49snR49 BET1P22804 142 aa-0.97□□□□□ -2.56
snR49snR49 YGR269WP40326 108 aa-0.97□□□□□ -2.56
snR49snR49 YGR050CP53231 118 aa-0.97□□□□□ -2.56
snR49snR49 MRPL50P53724 139 aa-0.97□□□□□ -2.56
snR49snR49 YML108WQ03759 105 aa-0.97□□□□□ -2.56
snR49snR49 YOL014WQ08110 124 aa-0.97□□□□□ -2.56
snR49snR49 FIT3Q08907 204 aa-0.97□□□□□ -2.56
snR49snR49 YOL107WQ12239 342 aa-0.97□□□□□ -2.56
snR49snR49 RHO1P06780 209 aaKnown RBP-0.98□□□□□ -2.57
snR49snR49 SNF4P12904 322 aa-0.98□□□□□ -2.57
snR49snR49 YEA6P39953 335 aa-0.98□□□□□ -2.57
snR49snR49 RFC4P40339 323 aaKnown RBP-0.98□□□□□ -2.57
snR49snR49 ERG10P41338 398 aaKnown RBP-0.98□□□□□ -2.57
snR49snR49 YAR1P46683 200 aa-0.98□□□□□ -2.57
snR49snR49 GET1P53192 235 aa-0.98□□□□□ -2.57
snR49snR49 YMR099CQ03161 297 aaKnown RBP-0.98□□□□□ -2.57
snR49snR49 DML1Q03652 475 aa-0.98□□□□□ -2.57
snR49snR49 MED4Q12343 284 aa-0.98□□□□□ -2.57
snR49snR49 GIS3Q12418 502 aa-0.98□□□□□ -2.57
snR49snR49 RDI1Q12434 202 aa-0.98□□□□□ -2.57
snR49snR49 HSL1P34244 1518 aa-0.99□□□□□ -2.57
snR49snR49 CDC33P07260 213 aaKnown RBP-0.99□□□□□ -2.57
snR49snR49 SEC4P07560 215 aaKnown RBP-0.99□□□□□ -2.57
Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms