RNA–Protein interactions for RNA: YPR189W

SKI3, Transcript of Ski complex component and TPR protein, yeast

Gene SKI3, Length 4,299 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI3	YPR189W	ERG24	P32462	438 aa	Known RBP	1.27	□□□□□ -2.21
SKI3	YPR189W	AVT6	P40074	448 aa		1.27	□□□□□ -2.21
SKI3	YPR189W	YGR050C	P53231	118 aa		1.27	□□□□□ -2.21
SKI3	YPR189W	AIM34	Q03673	198 aa		1.27	□□□□□ -2.21
SKI3	YPR189W	YMD8	Q03697	442 aa		1.27	□□□□□ -2.21
SKI3	YPR189W	YPL264C	Q08980	353 aa		1.27	□□□□□ -2.21
SKI3	YPR189W	YOR342C	Q12182	319 aa		1.27	□□□□□ -2.21
SKI3	YPR189W	CMD1	P06787	147 aa	Known RBP	1.27	□□□□□ -2.21
SKI3	YPR189W	GPI18	P38211	433 aa		1.27	□□□□□ -2.21
SKI3	YPR189W	OM14	P38325	134 aa		1.27	□□□□□ -2.21
SKI3	YPR189W	YIL054W	P40524	105 aa		1.27	□□□□□ -2.21
SKI3	YPR189W	YJR111C	P47148	283 aa	Known RBP	1.27	□□□□□ -2.21
SKI3	YPR189W	VMA10	P48836	114 aa	Known RBP	1.27	□□□□□ -2.21
SKI3	YPR189W	YGL262W	P53054	175 aa		1.27	□□□□□ -2.21
SKI3	YPR189W	CAB4	P53332	305 aa		1.27	□□□□□ -2.21
SKI3	YPR189W	SWP1	Q02795	286 aa		1.27	□□□□□ -2.21
SKI3	YPR189W	EMI1	Q04406	187 aa		1.27	□□□□□ -2.21
SKI3	YPR189W	RFU1	Q08003	200 aa		1.27	□□□□□ -2.21
SKI3	YPR189W	YPR202W	Q08993	238 aa		1.27	□□□□□ -2.21
SKI3	YPR189W	TIM22	Q12328	207 aa		1.27	□□□□□ -2.21
SKI3	YPR189W	MHT1	Q12525	324 aa		1.27	□□□□□ -2.21
SKI3	YPR189W	CDC7	P06243	507 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	DSF1	P0CX08	502 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	YNR073C	P0CX09	502 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	SCL1	P21243	252 aa	Known RBP	1.26	□□□□□ -2.21
SKI3	YPR189W	PTM1	P32857	523 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	DOG2	P38773	246 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	RCF2	P53721	224 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	YPS3	Q12303	508 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	ATG5	Q12380	294 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	RPL25	P04456	142 aa	Known RBP	1.26	□□□□□ -2.21
SKI3	YPR189W	SIR2	P06700	562 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	IDP1	P21954	428 aa	Known RBP	1.26	□□□□□ -2.21
SKI3	YPR189W	SCO1	P23833	295 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	CNB1	P25296	175 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	SMP1	P38128	452 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	AST2	P39945	430 aa	Known RBP	1.26	□□□□□ -2.21
SKI3	YPR189W	CUP9	P41817	306 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	YGR201C	P42936	225 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	MNN5	P46982	586 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	YNL010W	P53981	241 aa	Known RBP	1.26	□□□□□ -2.21
SKI3	YPR189W	YPL039W	Q03080	316 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	SHH4	Q06236	168 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	YLR046C	Q12253	270 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	ZRT3	P34240	503 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	TRM7	P38238	310 aa	Known RBP	1.26	□□□□□ -2.21
SKI3	YPR189W	VMA22	P38784	181 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	IPI1	P38803	334 aa	Predicted RBP	1.26	□□□□□ -2.21
SKI3	YPR189W	TRR2	P38816	342 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	TIF34	P40217	347 aa	Known RBP	1.26	□□□□□ -2.21
SKI3	YPR189W	REE1	P40893	198 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	BOR1	P53838	576 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	DID2	P69771	204 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	YLR031W	Q07978	186 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	YOL019W	Q08157	551 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	YBL112C	Q3E7Y4	105 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	YBR056W-A	I2HB52	66 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	YFR010W-A	P0C5N0	62 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	BUB2	P26448	306 aa	Predicted RBP	1.26	□□□□□ -2.21
SKI3	YPR189W	YBL081W	P38180	368 aa	Known RBP	1.26	□□□□□ -2.21
SKI3	YPR189W	ECM34	P38728	170 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	IRC22	P40006	225 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	RRT13	P40042	185 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	APS3	P47064	194 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	YDR476C	Q03362	224 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	GPI17	Q04080	534 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	ECM19	Q06011	112 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	YLR361C-A	Q3E795	98 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	RIB3	Q99258	208 aa		1.26	□□□□□ -2.21
SKI3	YPR189W	CCH1	P50077	2039 aa		1.25	□□□□□ -2.21
SKI3	YPR189W	SNF4	P12904	322 aa		1.25	□□□□□ -2.21
SKI3	YPR189W	YAR068W	P39564	161 aa		1.25	□□□□□ -2.21
SKI3	YPR189W	GLE2	P40066	365 aa		1.25	□□□□□ -2.21
SKI3	YPR189W	YER189W	P40104	122 aa		1.25	□□□□□ -2.21
SKI3	YPR189W	RPA43	P46669	326 aa		1.25	□□□□□ -2.21
SKI3	YPR189W	YJL028W	P47062	111 aa		1.25	□□□□□ -2.21
SKI3	YPR189W	ARP3	P47117	449 aa	Known RBP	1.25	□□□□□ -2.21
SKI3	YPR189W	MAK3	Q03503	176 aa		1.25	□□□□□ -2.21
SKI3	YPR189W	PKR1	Q03880	122 aa	Known RBP	1.25	□□□□□ -2.21
SKI3	YPR189W	HPT1	Q04178	221 aa	Known RBP	1.25	□□□□□ -2.21
SKI3	YPR189W	SUE1	Q06524	206 aa		1.25	□□□□□ -2.21
SKI3	YPR189W	BBP1	Q12365	385 aa		1.25	□□□□□ -2.21
SKI3	YPR189W	MBF1	O14467	151 aa	Known RBP	1.25	□□□□□ -2.21
SKI3	YPR189W	UBI4	P0CG63	381 aa	Known RBP	1.25	□□□□□ -2.21
SKI3	YPR189W	SFK1	P35735	353 aa		1.25	□□□□□ -2.21
SKI3	YPR189W	MSA2	P36157	363 aa		1.25	□□□□□ -2.21
SKI3	YPR189W	SYS1	P41544	203 aa		1.25	□□□□□ -2.21
SKI3	YPR189W	TRM12	Q04235	462 aa		1.25	□□□□□ -2.21
SKI3	YPR189W	NIP7	Q08962	181 aa	Known RBP	1.25	□□□□□ -2.21
SKI3	YPR189W	YPL257W	Q08974	193 aa		1.25	□□□□□ -2.21
SKI3	YPR189W	KTI11	Q3E840	82 aa		1.25	□□□□□ -2.21
SKI3	YPR189W	FCY2	P17064	533 aa		1.25	□□□□□ -2.21
SKI3	YPR189W	RPB9	P27999	122 aa		1.25	□□□□□ -2.21
SKI3	YPR189W	TKL2	P33315	681 aa		1.25	□□□□□ -2.21
SKI3	YPR189W	CIN5	P40917	295 aa		1.25	□□□□□ -2.21
SKI3	YPR189W	PGU1	P47180	361 aa		1.25	□□□□□ -2.21
SKI3	YPR189W	ARO8	P53090	500 aa	Known RBP	1.25	□□□□□ -2.21
SKI3	YPR189W	CSN9	Q03981	162 aa		1.25	□□□□□ -2.21
SKI3	YPR189W	PLP1	Q04004	230 aa		1.25	□□□□□ -2.21
SKI3	YPR189W	YMR320W	Q04897	101 aa		1.25	□□□□□ -2.21

Retrieved 100 of 5,963 RNA–protein pairs in 34.3 ms