RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W GGA1Q06336 557 aa0.02□□□□□ -2.41
SGF11YPL047W PST2Q12335 198 aaKnown RBP0.02□□□□□ -2.41
SGF11YPL047W YAR023CD6VPM8 179 aa0.01□□□□□ -2.41
SGF11YPL047W YCR023CP25351 611 aa0.01□□□□□ -2.41
SGF11YPL047W YCR016WP25617 290 aaKnown RBP0.01□□□□□ -2.41
SGF11YPL047W YBL010CP32788 280 aa0.01□□□□□ -2.41
SGF11YPL047W GSP2P32836 220 aaKnown RBP0.01□□□□□ -2.41
SGF11YPL047W YUH1P35127 236 aa0.01□□□□□ -2.41
SGF11YPL047W ETR1P38071 380 aa0.01□□□□□ -2.41
SGF11YPL047W MGA1P53050 456 aa0.01□□□□□ -2.41
SGF11YPL047W ALG13P53178 202 aa0.01□□□□□ -2.41
SGF11YPL047W SHH3Q04487 196 aa0.01□□□□□ -2.41
SGF11YPL047W ELP6Q04868 273 aa0.01□□□□□ -2.41
SGF11YPL047W YHR214C-EQ8TGK0 99 aa0.01□□□□□ -2.41
SGF11YPL047W MATALPHA1P0CY06 175 aa0□□□□□ -2.41
SGF11YPL047W HMLALPHA1P0CY07 175 aa0□□□□□ -2.41
SGF11YPL047W YMR31P19955 123 aa0□□□□□ -2.41
SGF11YPL047W RPL24BP24000 155 aaKnown RBP0□□□□□ -2.41
SGF11YPL047W BMH2P34730 273 aaKnown RBP0□□□□□ -2.41
SGF11YPL047W TRM5P38793 499 aa0□□□□□ -2.41
SGF11YPL047W HHY1P39982 102 aa0□□□□□ -2.41
SGF11YPL047W PDS1P40316 373 aaPredicted RBP0□□□□□ -2.41
SGF11YPL047W MPM1P40364 252 aa0□□□□□ -2.41
SGF11YPL047W YRB1P41920 201 aaKnown RBP0□□□□□ -2.41
SGF11YPL047W SER2P42941 309 aa0□□□□□ -2.41
SGF11YPL047W YNL033WP53964 284 aa0□□□□□ -2.41
SGF11YPL047W PET117Q02771 107 aa0□□□□□ -2.41
SGF11YPL047W YDC1Q02896 317 aa0□□□□□ -2.41
SGF11YPL047W YMR315WQ04869 349 aaKnown RBP0□□□□□ -2.41
SGF11YPL047W UPS1Q05776 175 aa0□□□□□ -2.41
SGF11YPL047W KEI1Q06346 221 aa0□□□□□ -2.41
SGF11YPL047W YOR015WQ12169 119 aa0□□□□□ -2.41
SGF11YPL047W JLP1Q12358 412 aa0□□□□□ -2.41
SGF11YPL047W YHR213W-BQ8TGK1 99 aa0□□□□□ -2.41
SGF11YPL047W NCB2Q92317 146 aa0□□□□□ -2.41
SGF11YPL047W THP2O13539 261 aaKnown RBP-0.01□□□□□ -2.41
SGF11YPL047W RPL28P02406 149 aaKnown RBP-0.01□□□□□ -2.41
SGF11YPL047W TIR1P10863 254 aa-0.01□□□□□ -2.41
SGF11YPL047W SNF4P12904 322 aa-0.01□□□□□ -2.41
SGF11YPL047W MAK31P23059 88 aa-0.01□□□□□ -2.41
SGF11YPL047W MGT1P26188 188 aa-0.01□□□□□ -2.41
SGF11YPL047W TAF14P35189 244 aa-0.01□□□□□ -2.41
SGF11YPL047W YKR070WP36151 352 aaKnown RBP-0.01□□□□□ -2.41
SGF11YPL047W ARP3P47117 449 aaKnown RBP-0.01□□□□□ -2.41
SGF11YPL047W RRP17Q04031 235 aaPredicted RBP-0.01□□□□□ -2.41
SGF11YPL047W RHO1P06780 209 aaKnown RBP-0.02□□□□□ -2.41
SGF11YPL047W YOL013W-AP0C272 63 aaPredicted RBP-0.02□□□□□ -2.41
SGF11YPL047W YBR121C-AP0C5L4 52 aa-0.02□□□□□ -2.41
SGF11YPL047W MER1P16523 270 aa-0.02□□□□□ -2.41
SGF11YPL047W IDP1P21954 428 aaKnown RBP-0.02□□□□□ -2.41
SGF11YPL047W YCR001WP25347 104 aa-0.02□□□□□ -2.41
SGF11YPL047W MSN4P33749 630 aa-0.02□□□□□ -2.41
SGF11YPL047W PTC1P35182 281 aa-0.02□□□□□ -2.41
SGF11YPL047W PAM17P36147 197 aa-0.02□□□□□ -2.41
SGF11YPL047W RTC3P38804 111 aaPredicted RBP-0.02□□□□□ -2.41
SGF11YPL047W AIM2P39721 246 aa-0.02□□□□□ -2.41
SGF11YPL047W MTW1P39731 289 aa-0.02□□□□□ -2.41
SGF11YPL047W YER085CP40058 173 aa-0.02□□□□□ -2.41
SGF11YPL047W CUP9P41817 306 aa-0.02□□□□□ -2.41
SGF11YPL047W SBH2P52871 88 aa-0.02□□□□□ -2.41
SGF11YPL047W YGL235WP53071 178 aa-0.02□□□□□ -2.41
SGF11YPL047W YGL230CP53074 147 aa-0.02□□□□□ -2.41
SGF11YPL047W YMR099CQ03161 297 aaKnown RBP-0.02□□□□□ -2.41
SGF11YPL047W NAT3Q06504 195 aa-0.02□□□□□ -2.41
SGF11YPL047W MDM32Q12171 622 aa-0.02□□□□□ -2.41
SGF11YPL047W YMR030W-AQ3E760 96 aa-0.02□□□□□ -2.41
SGF11YPL047W YKL183C-AQ3E765 70 aa-0.02□□□□□ -2.41
SGF11YPL047W YIL177CP40434 1758 aa-0.03□□□□□ -2.41
SGF11YPL047W YJL225CP40889 1758 aa-0.03□□□□□ -2.41
SGF11YPL047W STF2P16965 84 aa-0.03□□□□□ -2.41
SGF11YPL047W ASF2P32448 525 aaPredicted RBP-0.03□□□□□ -2.41
SGF11YPL047W SHB17P36136 271 aaKnown RBP-0.03□□□□□ -2.41
SGF11YPL047W MIC12P38341 106 aa-0.03□□□□□ -2.41
SGF11YPL047W ADO1P47143 340 aaKnown RBP-0.03□□□□□ -2.41
SGF11YPL047W TDA4P47153 279 aa-0.03□□□□□ -2.41
SGF11YPL047W YHP1Q04116 353 aa-0.03□□□□□ -2.41
SGF11YPL047W ADF1Q2V2Q1 113 aa-0.03□□□□□ -2.41
SGF11YPL047W MBF1O14467 151 aaKnown RBP-0.04□□□□□ -2.42
SGF11YPL047W YCR087C-AP37263 153 aa-0.04□□□□□ -2.42
SGF11YPL047W FMP23P38231 175 aa-0.04□□□□□ -2.42
SGF11YPL047W SPC25P40014 221 aa-0.04□□□□□ -2.42
SGF11YPL047W NSE4P43124 402 aa-0.04□□□□□ -2.42
SGF11YPL047W YMR253CQ04835 414 aa-0.04□□□□□ -2.42
SGF11YPL047W FUS2Q05670 677 aa-0.04□□□□□ -2.42
SGF11YPL047W YLR031WQ07978 186 aa-0.04□□□□□ -2.42
SGF11YPL047W DGK1Q12382 290 aa-0.04□□□□□ -2.42
SGF11YPL047W YRA2P36036 203 aaKnown RBP RIP-Chip data-0.05□□□□□ -2.42not detected
SGF11YPL047W ERG28P40030 148 aa-0.05□□□□□ -2.42
SGF11YPL047W CCS1P40202 249 aaKnown RBP-0.05□□□□□ -2.42
SGF11YPL047W YLR036CQ07986 203 aa-0.05□□□□□ -2.42
SGF11YPL047W DAS2Q12084 232 aa-0.05□□□□□ -2.42
SGF11YPL047W YOR342CQ12182 319 aa-0.05□□□□□ -2.42
SGF11YPL047W YDR157WA0A023PZE8 133 aa-0.06□□□□□ -2.42
SGF11YPL047W RPS24AP0CX31 135 aaKnown RBP-0.06□□□□□ -2.42
SGF11YPL047W RPS24BP0CX32 135 aaKnown RBP-0.06□□□□□ -2.42
SGF11YPL047W PPA2P28239 310 aa-0.06□□□□□ -2.42
SGF11YPL047W OTU1P43558 301 aa-0.06□□□□□ -2.42
SGF11YPL047W DML1Q03652 475 aa-0.06□□□□□ -2.42
SGF11YPL047W YOL014WQ08110 124 aa-0.06□□□□□ -2.42
SGF11YPL047W YLR412C-AQ3E742 68 aa-0.06□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms