RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeastyeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHL1YPL008W MRPL4P36517 319 aa3.44□□□□□ -1.86
CHL1YPL008W PRS3P38689 320 aaKnown RBP3.44□□□□□ -1.86
CHL1YPL008W IMD2P38697 523 aaKnown RBP3.44□□□□□ -1.86
CHL1YPL008W GTT1P40582 234 aa3.44□□□□□ -1.86
CHL1YPL008W SMD3P43321 101 aaKnown RBP3.44□□□□□ -1.86
CHL1YPL008W RRS1Q08746 203 aaKnown RBP3.44□□□□□ -1.86
CHL1YPL008W USV1Q12132 391 aa3.44□□□□□ -1.86
CHL1YPL008W SNU23Q12368 194 aaPredicted RBP3.44□□□□□ -1.86
CHL1YPL008W VPS13Q07878 3144 aa3.43□□□□□ -1.86
CHL1YPL008W RPB7P34087 171 aa3.43□□□□□ -1.86
CHL1YPL008W WSS1P38838 269 aa3.43□□□□□ -1.86
CHL1YPL008W EGT2P42835 1041 aa3.43□□□□□ -1.86
CHL1YPL008W YJR012CP47087 207 aa3.43□□□□□ -1.86
CHL1YPL008W ERG27Q12452 347 aaKnown RBP3.43□□□□□ -1.86
CHL1YPL008W YBR144CP34215 104 aa3.43□□□□□ -1.86
CHL1YPL008W SWD2P36104 329 aaPredicted RBP3.43□□□□□ -1.86
CHL1YPL008W RIB5P38145 238 aa3.43□□□□□ -1.86
CHL1YPL008W SSU72P53538 206 aaPredicted RBP3.43□□□□□ -1.86
CHL1YPL008W MSO1P53604 210 aaKnown RBP3.43□□□□□ -1.86
CHL1YPL008W ATG4P53867 494 aa3.43□□□□□ -1.86
CHL1YPL008W ATC1Q04005 294 aa3.43□□□□□ -1.86
CHL1YPL008W YMR082CQ04276 118 aa3.43□□□□□ -1.86
CHL1YPL008W RKI1Q12189 258 aa3.43□□□□□ -1.86
CHL1YPL008W CYR1P08678 2026 aaKnown RBP3.43□□□□□ -1.86
CHL1YPL008W GDH1P07262 454 aaKnown RBP3.42□□□□□ -1.86
CHL1YPL008W ERG2P32352 222 aa3.42□□□□□ -1.86
CHL1YPL008W TRS20P38334 175 aa3.42□□□□□ -1.86
CHL1YPL008W PAC2P39937 518 aa3.42□□□□□ -1.86
CHL1YPL008W YIP5P53108 310 aa3.42□□□□□ -1.86
CHL1YPL008W DIA1P54005 336 aa3.42□□□□□ -1.86
CHL1YPL008W LIP2Q06005 328 aa3.42□□□□□ -1.86
CHL1YPL008W YOR292CQ08743 309 aa3.42□□□□□ -1.86
CHL1YPL008W FRE8Q12209 686 aa3.42□□□□□ -1.86
CHL1YPL008W ADH3P07246 375 aaKnown RBP3.42□□□□□ -1.86
CHL1YPL008W RIP1P08067 215 aa3.42□□□□□ -1.86
CHL1YPL008W SIP1P32578 815 aa3.42□□□□□ -1.86
CHL1YPL008W YIL169CP40442 995 aa3.42□□□□□ -1.86
CHL1YPL008W YGR151CP53287 111 aa3.42□□□□□ -1.86
CHL1YPL008W RAF1Q06891 181 aa3.42□□□□□ -1.86
CHL1YPL008W YPL264CQ08980 353 aa3.42□□□□□ -1.86
CHL1YPL008W GLT1Q12680 2145 aaKnown RBP3.42□□□□□ -1.86
CHL1YPL008W LSB5P25369 354 aa3.41□□□□□ -1.86
CHL1YPL008W MNS1P32906 549 aa3.41□□□□□ -1.86
CHL1YPL008W YER079WP40052 210 aaKnown RBP3.41□□□□□ -1.86
CHL1YPL008W PDR17P53844 350 aa3.41□□□□□ -1.86
CHL1YPL008W MRP51Q02950 344 aa3.41□□□□□ -1.86
CHL1YPL008W FCY22Q12119 530 aa3.41□□□□□ -1.86
CHL1YPL008W YLL053CP0CD98 152 aa3.41□□□□□ -1.86
CHL1YPL008W TCA17P32613 152 aa3.41□□□□□ -1.86
CHL1YPL008W CLB6P32943 380 aa3.41□□□□□ -1.86
CHL1YPL008W SHB17P36136 271 aaKnown RBP3.41□□□□□ -1.86
CHL1YPL008W SWD3P38123 315 aa3.41□□□□□ -1.86
CHL1YPL008W FIG1P38224 298 aa3.41□□□□□ -1.86
CHL1YPL008W YPT31P38555 223 aaKnown RBP3.41□□□□□ -1.86
CHL1YPL008W YHR138CP38841 114 aaPredicted RBP3.41□□□□□ -1.86
CHL1YPL008W SIP18P50263 79 aa3.41□□□□□ -1.86
CHL1YPL008W YGL262WP53054 175 aa3.41□□□□□ -1.86
CHL1YPL008W RPB3P16370 318 aaKnown RBP3.4□□□□□ -1.86
CHL1YPL008W YMR31P19955 123 aa3.4□□□□□ -1.86
CHL1YPL008W QCR9P22289 66 aa3.4□□□□□ -1.86
CHL1YPL008W GAR1P28007 205 aaKnown RBP3.4□□□□□ -1.86
CHL1YPL008W IMP1P28627 190 aa3.4□□□□□ -1.86
CHL1YPL008W AGA2P32781 87 aa3.4□□□□□ -1.86
CHL1YPL008W MRPS9P38120 278 aa3.4□□□□□ -1.86
CHL1YPL008W MOH1P38191 138 aa3.4□□□□□ -1.86
CHL1YPL008W RMD6P39975 231 aa3.4□□□□□ -1.86
CHL1YPL008W VHS2P40463 436 aa3.4□□□□□ -1.86
CHL1YPL008W PAU15P40585 124 aa3.4□□□□□ -1.86
CHL1YPL008W OST1P41543 476 aaKnown RBP3.4□□□□□ -1.86
CHL1YPL008W MGA1P53050 456 aa3.4□□□□□ -1.86
CHL1YPL008W OCA2P53949 197 aa3.4□□□□□ -1.86
CHL1YPL008W YMR279CQ03263 540 aa3.4□□□□□ -1.86
CHL1YPL008W MPD1Q12404 318 aaKnown RBP3.4□□□□□ -1.86
CHL1YPL008W HUG1Q6Q5K6 68 aa3.4□□□□□ -1.86
CHL1YPL008W YER145C-AA0A023PYF4 145 aa3.4□□□□□ -1.87
CHL1YPL008W MSI1P13712 422 aa3.4□□□□□ -1.87
CHL1YPL008W MTR2P34232 184 aaKnown RBP3.4□□□□□ -1.87
CHL1YPL008W YKL070WP36087 169 aa3.4□□□□□ -1.87
CHL1YPL008W HSP10P38910 106 aa3.4□□□□□ -1.87
CHL1YPL008W YER084WP40057 128 aa3.4□□□□□ -1.87
CHL1YPL008W COX15P40086 486 aa3.4□□□□□ -1.87
CHL1YPL008W XPT1P47165 209 aa3.4□□□□□ -1.87
CHL1YPL008W TTI2P47168 421 aa3.4□□□□□ -1.87
CHL1YPL008W YGR149WP48236 432 aa3.4□□□□□ -1.87
CHL1YPL008W RIB4P50861 169 aaPredicted RBP3.4□□□□□ -1.87
CHL1YPL008W PAU4P53427 120 aa3.4□□□□□ -1.87
CHL1YPL008W GMC1Q04399 608 aa3.4□□□□□ -1.87
CHL1YPL008W RXT3Q07458 294 aa3.4□□□□□ -1.87
CHL1YPL008W FIT3Q08907 204 aa3.4□□□□□ -1.87
CHL1YPL008W YLR118CQ12354 227 aa3.4□□□□□ -1.87
CHL1YPL008W FAS1P07149 2051 aaKnown RBP3.4□□□□□ -1.87
CHL1YPL008W PCL1P24867 279 aa3.39□□□□□ -1.87
CHL1YPL008W LAC1P28496 418 aa3.39□□□□□ -1.87
CHL1YPL008W MRPS5P33759 307 aa3.39□□□□□ -1.87
CHL1YPL008W UPS2P35200 230 aa3.39□□□□□ -1.87
CHL1YPL008W ATG8P38182 117 aaRIP-Chip data3.39□□□□□ -1.87not detected
CHL1YPL008W UIP3P39547 235 aa3.39□□□□□ -1.87
CHL1YPL008W PHS1P40857 217 aa3.39□□□□□ -1.87
CHL1YPL008W STD1Q02794 444 aa3.39□□□□□ -1.87
CHL1YPL008W ADD37Q03233 198 aa3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 53.7 ms