RNA–Protein interactions for RNA: YOL139C

CDC33, Transcript of mRNA cap binding protein and translation initiation factor eIF4E, yeast

Gene CDC33, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC33	YOL139C	ADO1	P47143	340 aa	Known RBP	0.35	□□□□□ -2.35
CDC33	YOL139C	RAD17	P48581	401 aa		0.35	□□□□□ -2.35
CDC33	YOL139C	THG1	P53215	237 aa	Known RBP	0.35	□□□□□ -2.35
CDC33	YOL139C	HNT1	Q04344	158 aa	Known RBP	0.35	□□□□□ -2.35
CDC33	YOL139C	DYN3	Q04949	312 aa		0.35	□□□□□ -2.35
CDC33	YOL139C	JLP1	Q12358	412 aa		0.35	□□□□□ -2.35
CDC33	YOL139C	YAR023C	D6VPM8	179 aa		0.34	□□□□□ -2.36
CDC33	YOL139C	CKS1	P20486	150 aa	Known RBP	0.34	□□□□□ -2.36
CDC33	YOL139C	PAN3	P36102	679 aa	Predicted RBP	0.34	□□□□□ -2.36
CDC33	YOL139C	YBR242W	P38331	238 aa		0.34	□□□□□ -2.36
CDC33	YOL139C	IKI1	P38874	309 aa		0.34	□□□□□ -2.36
CDC33	YOL139C	YIL102C	P40488	101 aa		0.34	□□□□□ -2.36
CDC33	YOL139C	SER2	P42941	309 aa		0.34	□□□□□ -2.36
CDC33	YOL139C	ARP3	P47117	449 aa	Known RBP	0.34	□□□□□ -2.36
CDC33	YOL139C	UPS3	Q04006	179 aa		0.34	□□□□□ -2.36
CDC33	YOL139C	PRP11	Q07350	266 aa	Predicted RBP	0.34	□□□□□ -2.36
CDC33	YOL139C	FIT2	Q08906	153 aa		0.34	□□□□□ -2.36
CDC33	YOL139C	PST2	Q12335	198 aa	Known RBP	0.34	□□□□□ -2.36
CDC33	YOL139C	TAR1	Q8TGM6	124 aa		0.34	□□□□□ -2.36
CDC33	YOL139C	RPL28	P02406	149 aa	Known RBP	0.33	□□□□□ -2.36
CDC33	YOL139C	COX8	P04039	78 aa		0.33	□□□□□ -2.36
CDC33	YOL139C	TIR1	P10863	254 aa		0.33	□□□□□ -2.36
CDC33	YOL139C	NHP6B	P11633	99 aa	Known RBP	0.33	□□□□□ -2.36
CDC33	YOL139C	COQ1	P18900	473 aa		0.33	□□□□□ -2.36
CDC33	YOL139C	PPA2	P28239	310 aa		0.33	□□□□□ -2.36
CDC33	YOL139C	PRP18	P33411	251 aa	Predicted RBP	0.33	□□□□□ -2.36
CDC33	YOL139C	BMH2	P34730	273 aa	Known RBP	0.33	□□□□□ -2.36
CDC33	YOL139C	CBT1	P36038	271 aa	Predicted RBP	0.33	□□□□□ -2.36
CDC33	YOL139C	PDS1	P40316	373 aa	Predicted RBP	0.33	□□□□□ -2.36
CDC33	YOL139C	MPM1	P40364	252 aa		0.33	□□□□□ -2.36
CDC33	YOL139C	TDA4	P47153	279 aa		0.33	□□□□□ -2.36
CDC33	YOL139C	ARO80	Q04052	950 aa		0.33	□□□□□ -2.36
CDC33	YOL139C	YMR226C	Q05016	267 aa	Known RBP	0.33	□□□□□ -2.36
CDC33	YOL139C	IRC23	Q08416	157 aa		0.33	□□□□□ -2.36
CDC33	YOL139C	MRS1	P07266	363 aa		0.32	□□□□□ -2.36
CDC33	YOL139C	STE18	P18852	110 aa		0.32	□□□□□ -2.36
CDC33	YOL139C	YCR090C	P25654	182 aa	Known RBP	0.32	□□□□□ -2.36
CDC33	YOL139C	SPS18	P32572	300 aa		0.32	□□□□□ -2.36
CDC33	YOL139C	TRM5	P38793	499 aa		0.32	□□□□□ -2.36
CDC33	YOL139C	YER134C	P40081	178 aa		0.32	□□□□□ -2.36
CDC33	YOL139C	YJR111C	P47148	283 aa	Known RBP	0.32	□□□□□ -2.36
CDC33	YOL139C	YNL033W	P53964	284 aa		0.32	□□□□□ -2.36
CDC33	YOL139C	TIM11	P81449	96 aa	Predicted RBP	0.32	□□□□□ -2.36
CDC33	YOL139C	MBF1	O14467	151 aa	Known RBP	0.31	□□□□□ -2.36
CDC33	YOL139C	QCR7	P00128	127 aa		0.31	□□□□□ -2.36
CDC33	YOL139C	YPK2	P18961	677 aa		0.31	□□□□□ -2.36
CDC33	YOL139C	IDP1	P21954	428 aa	Known RBP	0.31	□□□□□ -2.36
CDC33	YOL139C	MGT1	P26188	188 aa		0.31	□□□□□ -2.36
CDC33	YOL139C	ETR1	P38071	380 aa		0.31	□□□□□ -2.36
CDC33	YOL139C	MAK5	P38112	773 aa	Predicted RBP	0.31	□□□□□ -2.36
CDC33	YOL139C	YNL200C	P40165	246 aa	Known RBP	0.31	□□□□□ -2.36
CDC33	YOL139C	CUP9	P41817	306 aa		0.31	□□□□□ -2.36
CDC33	YOL139C	YFL019C	P43576	117 aa		0.31	□□□□□ -2.36
CDC33	YOL139C	ALB1	P47019	175 aa	Predicted RBP	0.31	□□□□□ -2.36
CDC33	YOL139C	GET1	P53192	235 aa		0.31	□□□□□ -2.36
CDC33	YOL139C	YNL184C	P53876	108 aa		0.31	□□□□□ -2.36
CDC33	YOL139C	PGA2	P53903	129 aa		0.31	□□□□□ -2.36
CDC33	YOL139C	RNH1	Q04740	348 aa		0.31	□□□□□ -2.36
CDC33	YOL139C	ABP140	Q08641	628 aa	Known RBP	0.31	□□□□□ -2.36
CDC33	YOL139C	CCW12	Q12127	133 aa		0.31	□□□□□ -2.36
CDC33	YOL139C	YPR013C	Q12145	317 aa		0.31	□□□□□ -2.36
CDC33	YOL139C	YOR342C	Q12182	319 aa		0.31	□□□□□ -2.36
CDC33	YOL139C	RUD3	Q12234	484 aa	Known RBP	0.31	□□□□□ -2.36
CDC33	YOL139C	SNF4	P12904	322 aa		0.3	□□□□□ -2.36
CDC33	YOL139C	MAK31	P23059	88 aa		0.3	□□□□□ -2.36
CDC33	YOL139C	SFK1	P35735	353 aa		0.3	□□□□□ -2.36
CDC33	YOL139C	YHL037C	P38733	133 aa		0.3	□□□□□ -2.36
CDC33	YOL139C	TVP23	P38962	199 aa		0.3	□□□□□ -2.36
CDC33	YOL139C	MTW1	P39731	289 aa		0.3	□□□□□ -2.36
CDC33	YOL139C	SPC25	P40014	221 aa		0.3	□□□□□ -2.36
CDC33	YOL139C	GPI14	P47088	403 aa	Known RBP	0.3	□□□□□ -2.36
CDC33	YOL139C	PGA1	P53896	198 aa		0.3	□□□□□ -2.36
CDC33	YOL139C	YMR099C	Q03161	297 aa	Known RBP	0.3	□□□□□ -2.36
CDC33	YOL139C	YHP1	Q04116	353 aa		0.3	□□□□□ -2.36
CDC33	YOL139C	SHH3	Q04487	196 aa		0.3	□□□□□ -2.36
CDC33	YOL139C	DAS2	Q12084	232 aa		0.3	□□□□□ -2.36
CDC33	YOL139C	YOR015W	Q12169	119 aa		0.3	□□□□□ -2.36
CDC33	YOL139C	MDM32	Q12171	622 aa		0.3	□□□□□ -2.36
CDC33	YOL139C	ATP20	Q12233	115 aa		0.3	□□□□□ -2.36
CDC33	YOL139C	YOR381W-A	Q3E804	55 aa		0.3	□□□□□ -2.36
CDC33	YOL139C	YCR023C	P25351	611 aa		0.29	□□□□□ -2.36
CDC33	YOL139C	ARO7	P32178	256 aa		0.29	□□□□□ -2.36
CDC33	YOL139C	YBL010C	P32788	280 aa		0.29	□□□□□ -2.36
CDC33	YOL139C	PAM17	P36147	197 aa		0.29	□□□□□ -2.36
CDC33	YOL139C	RFC4	P40339	323 aa	Known RBP	0.29	□□□□□ -2.36
CDC33	YOL139C	NSE4	P43124	402 aa		0.29	□□□□□ -2.36
CDC33	YOL139C	VPS71	Q03433	280 aa		0.29	□□□□□ -2.36
CDC33	YOL139C	YMR253C	Q04835	414 aa		0.29	□□□□□ -2.36
CDC33	YOL139C	YLR031W	Q07978	186 aa		0.29	□□□□□ -2.36
CDC33	YOL139C	GET4	Q12125	312 aa		0.29	□□□□□ -2.36
CDC33	YOL139C	GIS3	Q12418	502 aa		0.29	□□□□□ -2.36
CDC33	YOL139C	YLR412C-A	Q3E742	68 aa		0.29	□□□□□ -2.36
CDC33	YOL139C	HTB1	P02293	131 aa	Known RBP	0.28	□□□□□ -2.36
CDC33	YOL139C	HTB2	P02294	131 aa		0.28	□□□□□ -2.36
CDC33	YOL139C	ADE1	P27616	306 aa		0.28	□□□□□ -2.36
CDC33	YOL139C	FYV4	P38783	130 aa	Predicted RBP	0.28	□□□□□ -2.36
CDC33	YOL139C	YGL235W	P53071	178 aa		0.28	□□□□□ -2.36
CDC33	YOL139C	YGL230C	P53074	147 aa		0.28	□□□□□ -2.36
CDC33	YOL139C	NRK1	P53915	240 aa		0.28	□□□□□ -2.36
CDC33	YOL139C	MET31	Q03081	177 aa		0.28	□□□□□ -2.36

Retrieved 100 of 5,963 RNA–protein pairs in 62.2 ms