RNA–Protein interactions for RNA: YNR051C

BRE5, Transcript of Ubiquitin protease cofactor, yeastyeast

Gene BRE5, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE5YNR051C YLR361C-AQ3E795 98 aa1.78□□□□□ -2.12
BRE5YNR051C YDL085C-AQ3E7B7 68 aaKnown RBP1.78□□□□□ -2.12
BRE5YNR051C SIR2P06700 562 aa1.77□□□□□ -2.13
BRE5YNR051C SCL1P21243 252 aaKnown RBP1.77□□□□□ -2.13
BRE5YNR051C MRPS28P21771 286 aa1.77□□□□□ -2.13
BRE5YNR051C YCR090CP25654 182 aaKnown RBP1.77□□□□□ -2.13
BRE5YNR051C ARO7P32178 256 aa1.77□□□□□ -2.13
BRE5YNR051C PGD1P40356 397 aa1.77□□□□□ -2.13
BRE5YNR051C VMA10P48836 114 aaKnown RBP1.77□□□□□ -2.13
BRE5YNR051C SWP1Q02795 286 aa1.77□□□□□ -2.13
BRE5YNR051C SHH4Q06236 168 aa1.77□□□□□ -2.13
BRE5YNR051C MDS3P53094 1487 aa1.77□□□□□ -2.13
BRE5YNR051C RAD50P12753 1312 aa1.77□□□□□ -2.13
BRE5YNR051C RPO41P13433 1351 aaKnown RBP1.77□□□□□ -2.13
BRE5YNR051C KOG1P38873 1557 aa1.77□□□□□ -2.13
BRE5YNR051C CDC7P06243 507 aa1.76□□□□□ -2.13
BRE5YNR051C SNF4P12904 322 aa1.76□□□□□ -2.13
BRE5YNR051C PEX34P25584 144 aa1.76□□□□□ -2.13
BRE5YNR051C FCY21P40039 528 aa1.76□□□□□ -2.13
BRE5YNR051C RPL33BP41056 107 aaKnown RBP1.76□□□□□ -2.13
BRE5YNR051C YJR015WP47090 510 aa1.76□□□□□ -2.13
BRE5YNR051C UBC12P52491 188 aa1.76□□□□□ -2.13
BRE5YNR051C RCF2P53721 224 aa1.76□□□□□ -2.13
BRE5YNR051C TMA20P89886 181 aaPredicted RBP1.76□□□□□ -2.13
BRE5YNR051C PKR1Q03880 122 aaKnown RBP1.76□□□□□ -2.13
BRE5YNR051C SPG3Q04398 127 aaPredicted RBP1.76□□□□□ -2.13
BRE5YNR051C YPR202WQ08993 238 aa1.76□□□□□ -2.13
BRE5YNR051C YPL162CQ12042 273 aa1.76□□□□□ -2.13
BRE5YNR051C EFG1Q3E705 233 aaKnown RBP1.76□□□□□ -2.13
BRE5YNR051C BEM2P39960 2167 aaKnown RBP1.76□□□□□ -2.13
BRE5YNR051C SEC4P07560 215 aaKnown RBP1.76□□□□□ -2.13
BRE5YNR051C PBI2P0CT04 75 aaKnown RBP1.76□□□□□ -2.13
BRE5YNR051C PET9P18239 318 aaKnown RBP1.76□□□□□ -2.13
BRE5YNR051C AHC2P25649 128 aa1.76□□□□□ -2.13
BRE5YNR051C OCH1P31755 480 aa1.76□□□□□ -2.13
BRE5YNR051C HMF1P40037 129 aaKnown RBP1.76□□□□□ -2.13
BRE5YNR051C CCC1P47818 322 aa1.76□□□□□ -2.13
BRE5YNR051C HSK3P69852 69 aa1.76□□□□□ -2.13
BRE5YNR051C DYN2Q02647 92 aa1.76□□□□□ -2.13
BRE5YNR051C RAV2Q03956 351 aa1.76□□□□□ -2.13
BRE5YNR051C TSC3Q3E790 80 aa1.76□□□□□ -2.13
BRE5YNR051C BOL1Q3E793 110 aa1.76□□□□□ -2.13
BRE5YNR051C RIB3Q99258 208 aa1.76□□□□□ -2.13
BRE5YNR051C MBF1O14467 151 aaKnown RBP1.75□□□□□ -2.13
BRE5YNR051C RAS2P01120 322 aaKnown RBP1.75□□□□□ -2.13
BRE5YNR051C SFK1P35735 353 aa1.75□□□□□ -2.13
BRE5YNR051C UTP30P36144 274 aaKnown RBP1.75□□□□□ -2.13
BRE5YNR051C YHR022CP38763 256 aa1.75□□□□□ -2.13
BRE5YNR051C IPI1P38803 334 aaPredicted RBP1.75□□□□□ -2.13
BRE5YNR051C YGR050CP53231 118 aa1.75□□□□□ -2.13
BRE5YNR051C YNR062CP53748 327 aa1.75□□□□□ -2.13
BRE5YNR051C CYT2Q00873 224 aa1.75□□□□□ -2.13
BRE5YNR051C YDR249CQ03787 373 aa1.75□□□□□ -2.13
BRE5YNR051C HPT1Q04178 221 aaKnown RBP1.75□□□□□ -2.13
BRE5YNR051C DGA1Q08650 418 aa1.75□□□□□ -2.13
BRE5YNR051C SWR1Q05471 1514 aa1.74□□□□□ -2.13
BRE5YNR051C TIM9O74700 87 aa1.74□□□□□ -2.13
BRE5YNR051C RPL2AP0CX45 254 aaKnown RBP1.74□□□□□ -2.13
BRE5YNR051C RPL2BP0CX46 254 aaKnown RBP1.74□□□□□ -2.13
BRE5YNR051C URA5P13298 226 aaKnown RBP1.74□□□□□ -2.13
BRE5YNR051C MAG1P22134 296 aaKnown RBP1.74□□□□□ -2.13
BRE5YNR051C BET1P22804 142 aa1.74□□□□□ -2.13
BRE5YNR051C HSP30P25619 332 aa1.74□□□□□ -2.13
BRE5YNR051C SUA7P29055 345 aaPredicted RBP1.74□□□□□ -2.13
BRE5YNR051C SEC17P32602 292 aa1.74□□□□□ -2.13
BRE5YNR051C YKL102CP34249 101 aa1.74□□□□□ -2.13
BRE5YNR051C CPR5P35176 225 aa1.74□□□□□ -2.13
BRE5YNR051C YBR285WP38354 144 aa1.74□□□□□ -2.13
BRE5YNR051C PRS3P38689 320 aaKnown RBP1.74□□□□□ -2.13
BRE5YNR051C VTC1P40046 129 aaRIP-Chip data1.74□□□□□ -2.13not detected
BRE5YNR051C TIR3P40552 269 aa1.74□□□□□ -2.13
BRE5YNR051C ARO8P53090 500 aaKnown RBP1.74□□□□□ -2.13
BRE5YNR051C YGL101WP53144 215 aa1.74□□□□□ -2.13
BRE5YNR051C HHT1P61830 136 aa1.74□□□□□ -2.13
BRE5YNR051C UBC7Q02159 165 aa1.74□□□□□ -2.13
BRE5YNR051C GPI17Q04080 534 aa1.74□□□□□ -2.13
BRE5YNR051C YDR278CQ05612 105 aa1.74□□□□□ -2.13
BRE5YNR051C YPD1Q07688 167 aa1.74□□□□□ -2.13
BRE5YNR051C MCP1Q12106 302 aa1.74□□□□□ -2.13
BRE5YNR051C SLO1Q3E784 85 aa1.74□□□□□ -2.13
BRE5YNR051C YPR014CQ6B0W2 109 aa1.74□□□□□ -2.13
BRE5YNR051C PDR18P53756 1333 aa1.74□□□□□ -2.13
BRE5YNR051C CKS1P20486 150 aaKnown RBP1.73□□□□□ -2.13
BRE5YNR051C TVP38P36164 337 aa1.73□□□□□ -2.13
BRE5YNR051C MRPL17P36528 281 aa1.73□□□□□ -2.13
BRE5YNR051C PHB1P40961 287 aa1.73□□□□□ -2.13
BRE5YNR051C PST2Q12335 198 aaKnown RBP1.73□□□□□ -2.13
BRE5YNR051C YFR032C-BQ8TGU2 87 aa1.73□□□□□ -2.13
BRE5YNR051C Q0144Q9ZZW2 109 aa1.73□□□□□ -2.13
BRE5YNR051C UBI4P0CG63 381 aaKnown RBP1.72□□□□□ -2.13
BRE5YNR051C SNC2P33328 115 aa1.72□□□□□ -2.13
BRE5YNR051C YET1P35723 206 aa1.72□□□□□ -2.13
BRE5YNR051C UMP1P38293 148 aa1.72□□□□□ -2.13
BRE5YNR051C DSE2P38844 325 aa1.72□□□□□ -2.13
BRE5YNR051C YEA4P40004 342 aa1.72□□□□□ -2.13
BRE5YNR051C AYR1P40471 297 aa1.72□□□□□ -2.13
BRE5YNR051C GVP36P40531 326 aaKnown RBP1.72□□□□□ -2.13
BRE5YNR051C ARP3P47117 449 aaKnown RBP1.72□□□□□ -2.13
BRE5YNR051C RBL2P48606 106 aaKnown RBP1.72□□□□□ -2.13
BRE5YNR051C SOL1P50278 321 aa1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms