RNA–Protein interactions for RNA: YNL287W

SEC21, Transcript of Gamma subunit of coatomer, yeastyeast

Gene SEC21, Length 2,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC21YNL287W YKL102CP34249 101 aa1.17□□□□□ -2.22
SEC21YNL287W CSH1P38287 376 aa1.17□□□□□ -2.22
SEC21YNL287W ANS1P38832 159 aa1.17□□□□□ -2.22
SEC21YNL287W GAA1P39012 614 aa1.17□□□□□ -2.22
SEC21YNL287W MST28P39552 234 aa1.17□□□□□ -2.22
SEC21YNL287W YND1P40009 630 aa1.17□□□□□ -2.22
SEC21YNL287W YER189WP40104 122 aa1.17□□□□□ -2.22
SEC21YNL287W KEG1P43614 200 aa1.17□□□□□ -2.22
SEC21YNL287W BUD13P46947 266 aaPredicted RBP1.17□□□□□ -2.22
SEC21YNL287W MNN5P46982 586 aa1.17□□□□□ -2.22
SEC21YNL287W AIM25P47140 327 aa1.17□□□□□ -2.22
SEC21YNL287W YGL230CP53074 147 aa1.17□□□□□ -2.22
SEC21YNL287W YGL039WP53183 348 aaKnown RBP1.17□□□□□ -2.22
SEC21YNL287W YGR039WP53225 103 aa1.17□□□□□ -2.22
SEC21YNL287W VHT1P53241 593 aa1.17□□□□□ -2.22
SEC21YNL287W AIM11P87275 137 aa1.17□□□□□ -2.22
SEC21YNL287W YPL067CQ02754 198 aa1.17□□□□□ -2.22
SEC21YNL287W BET5Q03630 159 aa1.17□□□□□ -2.22
SEC21YNL287W YET2Q04210 160 aa1.17□□□□□ -2.22
SEC21YNL287W FCF1Q05498 189 aaPredicted RBP1.17□□□□□ -2.22
SEC21YNL287W YHC1Q05900 231 aaKnown RBP1.17□□□□□ -2.22
SEC21YNL287W SHH4Q06236 168 aa1.17□□□□□ -2.22
SEC21YNL287W GPI11Q06636 219 aa1.17□□□□□ -2.22
SEC21YNL287W YDL057WQ07379 328 aa1.17□□□□□ -2.22
SEC21YNL287W GAT3Q07928 141 aa1.17□□□□□ -2.22
SEC21YNL287W RAD28Q12021 506 aa1.17□□□□□ -2.22
SEC21YNL287W YGK3Q12222 375 aaPredicted RBP1.17□□□□□ -2.22
SEC21YNL287W YPR064WQ12492 139 aa1.17□□□□□ -2.22
SEC21YNL287W YPL119C-AQ3E751 87 aa1.17□□□□□ -2.22
SEC21YNL287W YEL009C-AA0A023PZF2 135 aa1.17□□□□□ -2.22
SEC21YNL287W SIR2P06700 562 aa1.17□□□□□ -2.22
SEC21YNL287W SGA1P08019 549 aa1.17□□□□□ -2.22
SEC21YNL287W RPL30P14120 105 aaKnown RBP1.17□□□□□ -2.22
SEC21YNL287W RPB5P20434 215 aa1.17□□□□□ -2.22
SEC21YNL287W YCR007CP25354 239 aa1.17□□□□□ -2.22
SEC21YNL287W SPT4P32914 102 aaPredicted RBP1.17□□□□□ -2.22
SEC21YNL287W MCR1P36060 302 aaKnown RBP1.17□□□□□ -2.22
SEC21YNL287W RPL14AP36105 138 aaKnown RBP1.17□□□□□ -2.22
SEC21YNL287W LSM2P38203 95 aaKnown RBP1.17□□□□□ -2.22
SEC21YNL287W YBR013CP38215 129 aa1.17□□□□□ -2.22
SEC21YNL287W RPL14BP38754 138 aaKnown RBP1.17□□□□□ -2.22
SEC21YNL287W PRE5P40302 234 aaKnown RBP1.17□□□□□ -2.22
SEC21YNL287W SIM1P40472 476 aa1.17□□□□□ -2.22
SEC21YNL287W RRT5P43607 289 aa1.17□□□□□ -2.22
SEC21YNL287W YFR054CP43622 192 aa1.17□□□□□ -2.22
SEC21YNL287W GON7P46984 123 aa1.17□□□□□ -2.22
SEC21YNL287W YPS5P53057 165 aa1.17□□□□□ -2.22
SEC21YNL287W TIM13P53299 105 aa1.17□□□□□ -2.22
SEC21YNL287W BUD32P53323 261 aa1.17□□□□□ -2.22
SEC21YNL287W LSM7P53905 115 aaKnown RBP1.17□□□□□ -2.22
SEC21YNL287W APJ1P53940 528 aa1.17□□□□□ -2.22
SEC21YNL287W SEN15Q04675 128 aa1.17□□□□□ -2.22
SEC21YNL287W NAT3Q06504 195 aa1.17□□□□□ -2.22
SEC21YNL287W RRS1Q08746 203 aaKnown RBP1.17□□□□□ -2.22
SEC21YNL287W MCP1Q12106 302 aa1.17□□□□□ -2.22
SEC21YNL287W YPS3Q12303 508 aa1.17□□□□□ -2.22
SEC21YNL287W ORT1Q12375 292 aa1.17□□□□□ -2.22
SEC21YNL287W ISD11Q6Q560 94 aa1.17□□□□□ -2.22
SEC21YNL287W UBR1P19812 1950 aa1.17□□□□□ -2.22
SEC21YNL287W YHR139C-AO13536 103 aa1.16□□□□□ -2.22
SEC21YNL287W SUC2P00724 532 aa1.16□□□□□ -2.22
SEC21YNL287W MSI1P13712 422 aa1.16□□□□□ -2.22
SEC21YNL287W NOP1P15646 327 aaKnown RBP1.16□□□□□ -2.22
SEC21YNL287W SPO13P23624 291 aa1.16□□□□□ -2.22
SEC21YNL287W RPL16BP26785 198 aaKnown RBP1.16□□□□□ -2.22
SEC21YNL287W FUN19P28003 413 aaPredicted RBP1.16□□□□□ -2.22
SEC21YNL287W EMP24P32803 203 aaKnown RBP1.16□□□□□ -2.22
SEC21YNL287W TRS65P32893 560 aa1.16□□□□□ -2.22
SEC21YNL287W YBR090CP38253 122 aa1.16□□□□□ -2.22
SEC21YNL287W YEL075CP39972 122 aa1.16□□□□□ -2.22
SEC21YNL287W SPC25P40014 221 aa1.16□□□□□ -2.22
SEC21YNL287W TIF34P40217 347 aaKnown RBP1.16□□□□□ -2.22
SEC21YNL287W YIL059CP40520 121 aa1.16□□□□□ -2.22
SEC21YNL287W WWM1P43582 211 aaKnown RBP1.16□□□□□ -2.22
SEC21YNL287W HMS2P47175 358 aa1.16□□□□□ -2.22
SEC21YNL287W SBH1P52870 82 aa1.16□□□□□ -2.22
SEC21YNL287W ERG25P53045 309 aa1.16□□□□□ -2.22
SEC21YNL287W ARK1P53974 638 aa1.16□□□□□ -2.22
SEC21YNL287W SPR6Q01684 191 aa1.16□□□□□ -2.22
SEC21YNL287W YDR415CQ04033 374 aaPredicted RBP1.16□□□□□ -2.22
SEC21YNL287W SPG4Q04438 115 aa1.16□□□□□ -2.22
SEC21YNL287W DGA1Q08650 418 aa1.16□□□□□ -2.22
SEC21YNL287W MCT1Q12283 360 aa1.16□□□□□ -2.22
SEC21YNL287W IZH2Q12442 317 aa1.16□□□□□ -2.22
SEC21YNL287W HUT1Q12520 339 aa1.16□□□□□ -2.22
SEC21YNL287W YNL277W-AQ3E7Z0 62 aa1.16□□□□□ -2.22
SEC21YNL287W MLP1Q02455 1875 aaKnown RBP1.16□□□□□ -2.22
SEC21YNL287W SRB8P25648 1427 aa1.16□□□□□ -2.22
SEC21YNL287W YCF1P39109 1515 aaKnown RBP1.16□□□□□ -2.22
SEC21YNL287W BPT1P14772 1559 aa1.16□□□□□ -2.22
SEC21YNL287W COX5BP00425 151 aa1.16□□□□□ -2.22
SEC21YNL287W TIR1P10863 254 aa1.16□□□□□ -2.22
SEC21YNL287W UBC5P15732 148 aa1.16□□□□□ -2.22
SEC21YNL287W COX10P21592 462 aa1.16□□□□□ -2.22
SEC21YNL287W SSS1P35179 80 aa1.16□□□□□ -2.22
SEC21YNL287W YRA2P36036 203 aaKnown RBP RIP-Chip data1.16□□□□□ -2.22not detected
SEC21YNL287W FMP46P36141 133 aaKnown RBP1.16□□□□□ -2.22
SEC21YNL287W GPX2P38143 162 aa1.16□□□□□ -2.22
SEC21YNL287W MBA1P38300 278 aa1.16□□□□□ -2.22
SEC21YNL287W LAG1P38703 411 aa1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 50.8 ms