RNA–Protein interactions for RNA: YNL039W

BDP1, Transcript of Essential subunit of RNA polymerase III transcription factor (TFIIIB), yeastyeast

Gene BDP1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDP1YNL039W OPY1P38271 328 aa3.32□□□□□ -1.88
BDP1YNL039W YEA4P40004 342 aa3.32□□□□□ -1.88
BDP1YNL039W MNN5P46982 586 aa3.32□□□□□ -1.88
BDP1YNL039W CAB4P53332 305 aa3.32□□□□□ -1.88
BDP1YNL039W YDR114CQ04597 100 aa3.32□□□□□ -1.88
BDP1YNL039W GVP36P40531 326 aaKnown RBP3.31□□□□□ -1.88
BDP1YNL039W XPT1P47165 209 aa3.31□□□□□ -1.88
BDP1YNL039W TTI2P47168 421 aa3.31□□□□□ -1.88
BDP1YNL039W YGL204CP53089 101 aa3.31□□□□□ -1.88
BDP1YNL039W DAS2Q12084 232 aa3.31□□□□□ -1.88
BDP1YNL039W PEX34P25584 144 aa3.3□□□□□ -1.88
BDP1YNL039W IPI1P38803 334 aaPredicted RBP3.3□□□□□ -1.88
BDP1YNL039W CYC2P38909 366 aa3.3□□□□□ -1.88
BDP1YNL039W YER134CP40081 178 aa3.3□□□□□ -1.88
BDP1YNL039W LSM3P57743 89 aaKnown RBP3.3□□□□□ -1.88
BDP1YNL039W YDR274CP87283 123 aa3.3□□□□□ -1.88
BDP1YNL039W THI74Q04083 370 aa3.3□□□□□ -1.88
BDP1YNL039W SPG3Q04398 127 aaPredicted RBP3.3□□□□□ -1.88
BDP1YNL039W YLR412C-AQ3E742 68 aa3.3□□□□□ -1.88
BDP1YNL039W ODC2Q99297 307 aa3.3□□□□□ -1.88
BDP1YNL039W YER084WP40057 128 aa3.3□□□□□ -1.88
BDP1YNL039W APQ12P40532 138 aa3.3□□□□□ -1.88
BDP1YNL039W YFL019CP43576 117 aa3.3□□□□□ -1.88
BDP1YNL039W FEX1Q08913 375 aa3.3□□□□□ -1.88
BDP1YNL039W FEX2Q08991 375 aa3.3□□□□□ -1.88
BDP1YNL039W CPA1P07258 411 aaKnown RBP3.29□□□□□ -1.88
BDP1YNL039W RPL2AP0CX45 254 aaKnown RBP3.29□□□□□ -1.88
BDP1YNL039W RPL2BP0CX46 254 aaKnown RBP3.29□□□□□ -1.88
BDP1YNL039W SCM4P32564 187 aa3.29□□□□□ -1.88
BDP1YNL039W PAN3P36102 679 aaPredicted RBP3.29□□□□□ -1.88
BDP1YNL039W CSH1P38287 376 aa3.29□□□□□ -1.88
BDP1YNL039W RAV2Q03956 351 aa3.29□□□□□ -1.88
BDP1YNL039W NAT3Q06504 195 aa3.29□□□□□ -1.88
BDP1YNL039W YAR023CD6VPM8 179 aa3.28□□□□□ -1.88
BDP1YNL039W FCY21P40039 528 aa3.28□□□□□ -1.88
BDP1YNL039W VTC1P40046 129 aaRIP-Chip data3.28□□□□□ -1.88not detected
BDP1YNL039W UMP1P38293 148 aa3.28□□□□□ -1.89
BDP1YNL039W PGD1P40356 397 aa3.28□□□□□ -1.89
BDP1YNL039W ORM1P53224 222 aa3.28□□□□□ -1.89
BDP1YNL039W TAF2P23255 1407 aa3.27□□□□□ -1.89
BDP1YNL039W YGR201CP42936 225 aa3.27□□□□□ -1.89
BDP1YNL039W HHT1P61830 136 aa3.27□□□□□ -1.89
BDP1YNL039W NEJ1Q06148 342 aa3.27□□□□□ -1.89
BDP1YNL039W RSA4P25382 515 aaKnown RBP3.26□□□□□ -1.89
BDP1YNL039W AGA2P32781 87 aa3.26□□□□□ -1.89
BDP1YNL039W SNC2P33328 115 aa3.26□□□□□ -1.89
BDP1YNL039W YBR285WP38354 144 aa3.26□□□□□ -1.89
BDP1YNL039W DLS1P40366 167 aa3.26□□□□□ -1.89
BDP1YNL039W RBL2P48606 106 aaKnown RBP3.26□□□□□ -1.89
BDP1YNL039W VPS71Q03433 280 aa3.26□□□□□ -1.89
BDP1YNL039W SFK1P35735 353 aa3.25□□□□□ -1.89
BDP1YNL039W YHR180WP38868 163 aa3.25□□□□□ -1.89
BDP1YNL039W YMR099CQ03161 297 aaKnown RBP3.25□□□□□ -1.89
BDP1YNL039W RPL30P14120 105 aaKnown RBP3.25□□□□□ -1.89
BDP1YNL039W KRE1P17260 313 aa3.25□□□□□ -1.89
BDP1YNL039W STP22P25604 385 aa3.25□□□□□ -1.89
BDP1YNL039W YHL026CP38740 315 aa3.25□□□□□ -1.89
BDP1YNL039W YJR015WP47090 510 aa3.25□□□□□ -1.89
BDP1YNL039W YNL200CP40165 246 aaKnown RBP3.24□□□□□ -1.89
BDP1YNL039W DOC1P53068 250 aa3.24□□□□□ -1.89
BDP1YNL039W POR1P04840 283 aaKnown RBP3.23□□□□□ -1.89
BDP1YNL039W RPL26AP05743 127 aaKnown RBP3.23□□□□□ -1.89
BDP1YNL039W AGE2P40529 298 aa3.23□□□□□ -1.89
BDP1YNL039W EAF6P47128 113 aa3.23□□□□□ -1.89
BDP1YNL039W RPL26BP53221 127 aaKnown RBP3.23□□□□□ -1.89
BDP1YNL039W TIM13P53299 105 aa3.23□□□□□ -1.89
BDP1YNL039W CSN9Q03981 162 aa3.23□□□□□ -1.89
BDP1YNL039W YOR214CQ12282 236 aa3.23□□□□□ -1.89
BDP1YNL039W ERJ5P43613 295 aaPredicted RBP3.23□□□□□ -1.89
BDP1YNL039W FSF1Q12029 327 aaKnown RBP3.23□□□□□ -1.89
BDP1YNL039W YGR219WP53307 113 aa3.22□□□□□ -1.89
BDP1YNL039W MRPS8Q03799 155 aa3.22□□□□□ -1.89
BDP1YNL039W YMR320WQ04897 101 aa3.22□□□□□ -1.89
BDP1YNL039W NSP1P14907 823 aaKnown RBP3.21□□□□□ -1.9
BDP1YNL039W CPR5P35176 225 aa3.21□□□□□ -1.9
BDP1YNL039W YET1P35723 206 aa3.21□□□□□ -1.9
BDP1YNL039W GLR1P41921 483 aaKnown RBP3.21□□□□□ -1.9
BDP1YNL039W YMR295CQ03559 197 aa3.21□□□□□ -1.9
BDP1YNL039W ATO3Q12359 275 aa3.21□□□□□ -1.9
BDP1YNL039W ATP5P09457 212 aa3.2□□□□□ -1.9
BDP1YNL039W TIR1P10863 254 aa3.2□□□□□ -1.9
BDP1YNL039W FYV4P38783 130 aaPredicted RBP3.2□□□□□ -1.9
BDP1YNL039W YPL073CP40323 161 aa3.2□□□□□ -1.9
BDP1YNL039W RPL33BP41056 107 aaKnown RBP3.2□□□□□ -1.9
BDP1YNL039W CCC1P47818 322 aa3.2□□□□□ -1.9
BDP1YNL039W MPC3P53311 146 aa3.2□□□□□ -1.9
BDP1YNL039W YPR195CQ06594 109 aa3.2□□□□□ -1.9
BDP1YNL039W FMT1P32785 401 aa3.2□□□□□ -1.9
BDP1YNL039W SHE2P36068 246 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
BDP1YNL039W NSA2P40078 261 aaKnown RBP3.2□□□□□ -1.9
BDP1YNL039W YFR054CP43622 192 aa3.2□□□□□ -1.9
BDP1YNL039W FIP1P45976 327 aa3.2□□□□□ -1.9
BDP1YNL039W YJR146WP47174 117 aa3.2□□□□□ -1.9
BDP1YNL039W YNR062CP53748 327 aa3.2□□□□□ -1.9
BDP1YNL039W GAL83Q04739 417 aa3.2□□□□□ -1.9
BDP1YNL039W FYV12Q08559 129 aa3.2□□□□□ -1.9
BDP1YNL039W PST2Q12335 198 aaKnown RBP3.2□□□□□ -1.9
BDP1YNL039W YLR361C-AQ3E795 98 aa3.2□□□□□ -1.9
BDP1YNL039W RIB3Q99258 208 aa3.2□□□□□ -1.9
BDP1YNL039W PHB1P40961 287 aa3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms