RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W MEP2P41948 499 aa2.05□□□□□ -2.08
UBP15YMR304W YIP1P53039 248 aa2.05□□□□□ -2.08
UBP15YMR304W SDT1P53078 280 aa2.05□□□□□ -2.08
UBP15YMR304W NIF3P53081 288 aa2.05□□□□□ -2.08
UBP15YMR304W YNL033WP53964 284 aa2.05□□□□□ -2.08
UBP15YMR304W YNL019CP53975 284 aa2.05□□□□□ -2.08
UBP15YMR304W IDP3P53982 420 aaKnown RBP2.05□□□□□ -2.08
UBP15YMR304W GRX5Q02784 150 aa2.05□□□□□ -2.08
UBP15YMR304W PPN1Q04119 674 aa2.05□□□□□ -2.08
UBP15YMR304W ENT4Q07872 247 aa2.05□□□□□ -2.08
UBP15YMR304W RDR1Q08904 546 aa2.05□□□□□ -2.08
UBP15YMR304W VPS68Q12016 184 aa2.05□□□□□ -2.08
UBP15YMR304W TRM13Q12383 476 aa2.05□□□□□ -2.08
UBP15YMR304W IGO2Q9P305 131 aa2.05□□□□□ -2.08
UBP15YMR304W FUN14P18411 198 aa2.05□□□□□ -2.08
UBP15YMR304W YMR31P19955 123 aa2.05□□□□□ -2.08
UBP15YMR304W SDP1P40479 209 aa2.05□□□□□ -2.08
UBP15YMR304W YJL213WP40896 331 aa2.05□□□□□ -2.08
UBP15YMR304W SYS1P41544 203 aa2.05□□□□□ -2.08
UBP15YMR304W YJL028WP47062 111 aa2.05□□□□□ -2.08
UBP15YMR304W TTI2P47168 421 aa2.05□□□□□ -2.08
UBP15YMR304W HNT2P49775 206 aa2.05□□□□□ -2.08
UBP15YMR304W SAY1P53324 424 aa2.05□□□□□ -2.08
UBP15YMR304W ASI3P53983 676 aa2.05□□□□□ -2.08
UBP15YMR304W MAK3Q03503 176 aa2.05□□□□□ -2.08
UBP15YMR304W YMR166CQ03829 368 aa2.05□□□□□ -2.08
UBP15YMR304W YOL073CQ08232 322 aa2.05□□□□□ -2.08
UBP15YMR304W YOL131WQ08270 108 aa2.05□□□□□ -2.08
UBP15YMR304W UBX3Q12229 455 aa2.05□□□□□ -2.08
UBP15YMR304W YIL134C-AQ45U18 67 aa2.05□□□□□ -2.08
UBP15YMR304W YER145C-AA0A023PYF4 145 aa2.04□□□□□ -2.08
UBP15YMR304W NAS2P40555 220 aa2.04□□□□□ -2.08
UBP15YMR304W FAR3P46671 204 aa2.04□□□□□ -2.08
UBP15YMR304W YJR096WP47137 282 aa2.04□□□□□ -2.08
UBP15YMR304W SEI1Q06058 285 aa2.04□□□□□ -2.08
UBP15YMR304W YBR255C-AQ3E776 120 aa2.04□□□□□ -2.08
UBP15YMR304W YLR099W-AQ3E798 87 aa2.04□□□□□ -2.08
UBP15YMR304W YLR149CQ99296 730 aa2.04□□□□□ -2.08
UBP15YMR304W COX5BP00425 151 aa2.04□□□□□ -2.08
UBP15YMR304W TFS1P14306 219 aa2.04□□□□□ -2.08
UBP15YMR304W HSP26P15992 214 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
UBP15YMR304W IES6P32617 166 aa2.04□□□□□ -2.08
UBP15YMR304W SDS24P38314 527 aa2.04□□□□□ -2.08
UBP15YMR304W MTC4P38335 694 aaKnown RBP2.04□□□□□ -2.08
UBP15YMR304W RPL14BP38754 138 aaKnown RBP2.04□□□□□ -2.08
UBP15YMR304W MIG3P39943 394 aa2.04□□□□□ -2.08
UBP15YMR304W SPG5P42933 373 aa2.04□□□□□ -2.08
UBP15YMR304W OTU1P43558 301 aa2.04□□□□□ -2.08
UBP15YMR304W RTA1P53047 317 aa2.04□□□□□ -2.08
UBP15YMR304W ATG41Q12048 136 aa2.04□□□□□ -2.08
UBP15YMR304W YBR126W-AQ8TGU7 68 aa2.04□□□□□ -2.08
UBP15YMR304W TRA1P38811 3744 aa2.04□□□□□ -2.08
UBP15YMR304W YLR302CO13544 120 aa2.04□□□□□ -2.08
UBP15YMR304W RBK1P25332 333 aa2.04□□□□□ -2.08
UBP15YMR304W VBA2P38358 474 aaKnown RBP2.04□□□□□ -2.08
UBP15YMR304W YGL260WP53056 76 aa2.04□□□□□ -2.08
UBP15YMR304W TAZ1Q06510 381 aa2.04□□□□□ -2.08
UBP15YMR304W POS5Q06892 414 aa2.04□□□□□ -2.08
UBP15YMR304W ATO3Q12359 275 aa2.04□□□□□ -2.08
UBP15YMR304W DYN1P36022 4092 aa2.03□□□□□ -2.08
UBP15YMR304W HIS1P00498 297 aaKnown RBP2.03□□□□□ -2.08
UBP15YMR304W VAR1P02381 398 aa2.03□□□□□ -2.08
UBP15YMR304W SAR1P20606 190 aaKnown RBP2.03□□□□□ -2.08
UBP15YMR304W ELO2P25358 347 aa2.03□□□□□ -2.08
UBP15YMR304W ADE1P27616 306 aa2.03□□□□□ -2.08
UBP15YMR304W SLM6P38343 150 aa2.03□□□□□ -2.08
UBP15YMR304W ASP1P38986 381 aaPredicted RBP2.03□□□□□ -2.08
UBP15YMR304W GAA1P39012 614 aa2.03□□□□□ -2.08
UBP15YMR304W SPO73P40031 143 aa2.03□□□□□ -2.08
UBP15YMR304W SGN1P40561 250 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
UBP15YMR304W PGU1P47180 361 aa2.03□□□□□ -2.08
UBP15YMR304W VPS28Q02767 242 aa2.03□□□□□ -2.08
UBP15YMR304W HLR1Q04429 423 aa2.03□□□□□ -2.08
UBP15YMR304W AIM33Q04516 312 aa2.03□□□□□ -2.08
UBP15YMR304W ATG33Q06485 197 aa2.03□□□□□ -2.08
UBP15YMR304W XYL2Q07993 356 aa2.03□□□□□ -2.08
UBP15YMR304W YLL056CQ12177 298 aa2.03□□□□□ -2.08
UBP15YMR304W MCT1Q12283 360 aa2.03□□□□□ -2.08
UBP15YMR304W RPL35AP0CX84 120 aaKnown RBP2.03□□□□□ -2.08
UBP15YMR304W RPL35BP0CX85 120 aaKnown RBP2.03□□□□□ -2.08
UBP15YMR304W GCV3P39726 170 aaPredicted RBP2.03□□□□□ -2.08
UBP15YMR304W KEI1Q06346 221 aa2.03□□□□□ -2.08
UBP15YMR304W FCY22Q12119 530 aa2.03□□□□□ -2.08
UBP15YMR304W NAG1Q8TGN9 163 aa2.03□□□□□ -2.08
UBP15YMR304W SAL1D6W196 494 aa2.03□□□□□ -2.09
UBP15YMR304W SEC4P07560 215 aaKnown RBP2.03□□□□□ -2.09
UBP15YMR304W YEL076C-AP0CX16 216 aa2.03□□□□□ -2.09
UBP15YMR304W YLR464WP0CX17 216 aa2.03□□□□□ -2.09
UBP15YMR304W YKL075CP36083 450 aa2.03□□□□□ -2.09
UBP15YMR304W YEL076CP39971 216 aa2.03□□□□□ -2.09
UBP15YMR304W AIM11P87275 137 aa2.03□□□□□ -2.09
UBP15YMR304W YMR130WQ04223 302 aa2.03□□□□□ -2.09
UBP15YMR304W FIT1Q04433 528 aa2.03□□□□□ -2.09
UBP15YMR304W YPR027CQ12079 277 aa2.03□□□□□ -2.09
UBP15YMR304W YPL247CQ12523 523 aa2.03□□□□□ -2.09
UBP15YMR304W POP5P28005 173 aa2.02□□□□□ -2.09
UBP15YMR304W UGX2P32772 223 aa2.02□□□□□ -2.09
UBP15YMR304W REC114P32841 428 aa2.02□□□□□ -2.09
UBP15YMR304W GLE2P40066 365 aa2.02□□□□□ -2.09
UBP15YMR304W TOS3P43637 560 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 171.9 ms