RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C PAM17P36147 197 aa-0.12□□□□□ -2.43
VPS20YMR077C RTC3P38804 111 aaPredicted RBP-0.12□□□□□ -2.43
VPS20YMR077C PDR17P53844 350 aa-0.12□□□□□ -2.43
VPS20YMR077C YMR099CQ03161 297 aaKnown RBP-0.12□□□□□ -2.43
VPS20YMR077C YMR295CQ03559 197 aa-0.12□□□□□ -2.43
VPS20YMR077C JLP1Q12358 412 aa-0.12□□□□□ -2.43
VPS20YMR077C PST2Q12335 198 aaKnown RBP-0.13□□□□□ -2.43
VPS20YMR077C YAR023CD6VPM8 179 aa-0.14□□□□□ -2.43
VPS20YMR077C STF2P16965 84 aa-0.14□□□□□ -2.43
VPS20YMR077C SPS18P32572 300 aa-0.14□□□□□ -2.43
VPS20YMR077C BMH2P34730 273 aaKnown RBP-0.14□□□□□ -2.43
VPS20YMR077C MAK5P38112 773 aaPredicted RBP-0.14□□□□□ -2.43
VPS20YMR077C ERG10P41338 398 aaKnown RBP-0.14□□□□□ -2.43
VPS20YMR077C GCN20P43535 752 aaKnown RBP-0.14□□□□□ -2.43
VPS20YMR077C DCV1P43595 202 aa-0.14□□□□□ -2.43
VPS20YMR077C MGA1P53050 456 aa-0.14□□□□□ -2.43
VPS20YMR077C YNL033WP53964 284 aa-0.14□□□□□ -2.43
VPS20YMR077C GET4Q12125 312 aa-0.14□□□□□ -2.43
VPS20YMR077C MDM32Q12171 622 aa-0.14□□□□□ -2.43
VPS20YMR077C FAS1P07149 2051 aaKnown RBP-0.15□□□□□ -2.43
VPS20YMR077C RPL24BP24000 155 aaKnown RBP-0.15□□□□□ -2.43
VPS20YMR077C TRM5P38793 499 aa-0.15□□□□□ -2.43
VPS20YMR077C YER134CP40081 178 aa-0.15□□□□□ -2.43
VPS20YMR077C ARP3P47117 449 aaKnown RBP-0.15□□□□□ -2.43
VPS20YMR077C SBH2P52871 88 aa-0.15□□□□□ -2.43
VPS20YMR077C DYN3Q04949 312 aa-0.15□□□□□ -2.43
VPS20YMR077C GGA1Q06336 557 aa-0.15□□□□□ -2.43
VPS20YMR077C ABP140Q08641 628 aaKnown RBP-0.15□□□□□ -2.43
VPS20YMR077C YKL183C-AQ3E765 70 aa-0.15□□□□□ -2.43
VPS20YMR077C YBR121C-AP0C5L4 52 aa-0.16□□□□□ -2.44
VPS20YMR077C YPK2P18961 677 aa-0.16□□□□□ -2.44
VPS20YMR077C PPA2P28239 310 aa-0.16□□□□□ -2.44
VPS20YMR077C MTW1P39731 289 aa-0.16□□□□□ -2.44
VPS20YMR077C ERG28P40030 148 aa-0.16□□□□□ -2.44
VPS20YMR077C SER2P42941 309 aa-0.16□□□□□ -2.44
VPS20YMR077C YJR015WP47090 510 aa-0.16□□□□□ -2.44
VPS20YMR077C AIM2P39721 246 aa-0.17□□□□□ -2.44
VPS20YMR077C YER085CP40058 173 aa-0.17□□□□□ -2.44
VPS20YMR077C YNL194CP40169 301 aa-0.17□□□□□ -2.44
VPS20YMR077C CUP9P41817 306 aa-0.17□□□□□ -2.44
VPS20YMR077C IRC18P47056 224 aa-0.17□□□□□ -2.44
VPS20YMR077C NOP19P53317 196 aaPredicted RBP-0.17□□□□□ -2.44
VPS20YMR077C RRP17Q04031 235 aaPredicted RBP-0.17□□□□□ -2.44
VPS20YMR077C SHH3Q04487 196 aa-0.17□□□□□ -2.44
VPS20YMR077C YOL014WQ08110 124 aa-0.17□□□□□ -2.44
VPS20YMR077C MGT1P26188 188 aa-0.18□□□□□ -2.44
VPS20YMR077C ETR1P38071 380 aa-0.18□□□□□ -2.44
VPS20YMR077C SKI6P46948 246 aaPredicted RBP-0.18□□□□□ -2.44
VPS20YMR077C YMR253CQ04835 414 aa-0.18□□□□□ -2.44
VPS20YMR077C ELP6Q04868 273 aa-0.18□□□□□ -2.44
VPS20YMR077C DUR1,2P32528 1835 aaKnown RBP-0.19□□□□□ -2.44
VPS20YMR077C YDR157WA0A023PZE8 133 aa-0.19□□□□□ -2.44
VPS20YMR077C YOL013W-AP0C272 63 aaPredicted RBP-0.19□□□□□ -2.44
VPS20YMR077C TIR1P10863 254 aa-0.19□□□□□ -2.44
VPS20YMR077C SNF4P12904 322 aa-0.19□□□□□ -2.44
VPS20YMR077C YCR023CP25351 611 aa-0.19□□□□□ -2.44
VPS20YMR077C CBT1P36038 271 aaPredicted RBP-0.19□□□□□ -2.44
VPS20YMR077C YRB1P41920 201 aaKnown RBP-0.19□□□□□ -2.44
VPS20YMR077C YGL235WP53071 178 aa-0.19□□□□□ -2.44
VPS20YMR077C TMA23Q03525 211 aa-0.19□□□□□ -2.44
VPS20YMR077C FUS2Q05670 677 aa-0.19□□□□□ -2.44
VPS20YMR077C PRM3Q08931 133 aa-0.19□□□□□ -2.44
VPS20YMR077C YML100W-AQ8TGT0 57 aa-0.19□□□□□ -2.44
VPS20YMR077C MBF1O14467 151 aaKnown RBP-0.2□□□□□ -2.44
VPS20YMR077C CNB1P25296 175 aa-0.2□□□□□ -2.44
VPS20YMR077C YBL010CP32788 280 aa-0.2□□□□□ -2.44
VPS20YMR077C YCR087C-AP37263 153 aa-0.2□□□□□ -2.44
VPS20YMR077C MPM1P40364 252 aa-0.2□□□□□ -2.44
VPS20YMR077C YJR111CP47148 283 aaKnown RBP-0.2□□□□□ -2.44
VPS20YMR077C PIR1Q03178 341 aa-0.2□□□□□ -2.44
VPS20YMR077C ADF1Q2V2Q1 113 aa-0.2□□□□□ -2.44
VPS20YMR077C YHR213W-BQ8TGK1 99 aa-0.2□□□□□ -2.44
VPS20YMR077C PDS1P40316 373 aaPredicted RBP-0.21□□□□□ -2.44
VPS20YMR077C CWC23P52868 283 aaPredicted RBP-0.21□□□□□ -2.44
VPS20YMR077C NHP6BP11633 99 aaKnown RBP-0.22□□□□□ -2.44
VPS20YMR077C STE18P18852 110 aa-0.22□□□□□ -2.44
VPS20YMR077C IDP1P21954 428 aaKnown RBP-0.22□□□□□ -2.44
VPS20YMR077C YCR001WP25347 104 aa-0.22□□□□□ -2.44
VPS20YMR077C PRP18P33411 251 aaPredicted RBP-0.22□□□□□ -2.44
VPS20YMR077C YKR070WP36151 352 aaKnown RBP-0.22□□□□□ -2.44
VPS20YMR077C SPC25P40014 221 aa-0.22□□□□□ -2.44
VPS20YMR077C RTR1P40084 226 aaPredicted RBP-0.22□□□□□ -2.44
VPS20YMR077C RFC4P40339 323 aaKnown RBP-0.22□□□□□ -2.44
VPS20YMR077C UPS1Q05776 175 aa-0.22□□□□□ -2.44
VPS20YMR077C NAT3Q06504 195 aa-0.22□□□□□ -2.44
VPS20YMR077C HHY1P39982 102 aa-0.23□□□□□ -2.45
VPS20YMR077C RAD17P48581 401 aa-0.23□□□□□ -2.45
VPS20YMR077C KEI1Q06346 221 aa-0.23□□□□□ -2.45
VPS20YMR077C YLR036CQ07986 203 aa-0.23□□□□□ -2.45
VPS20YMR077C YOR015WQ12169 119 aa-0.23□□□□□ -2.45
VPS20YMR077C NSE4P43124 402 aa-0.24□□□□□ -2.45
VPS20YMR077C YDC1Q02896 317 aa-0.24□□□□□ -2.45
VPS20YMR077C YMR030W-AQ3E760 96 aa-0.24□□□□□ -2.45
VPS20YMR077C CDC33P07260 213 aaKnown RBP-0.25□□□□□ -2.45
VPS20YMR077C TAF14P35189 244 aa-0.25□□□□□ -2.45
VPS20YMR077C OTU1P43558 301 aa-0.25□□□□□ -2.45
VPS20YMR077C YFL019CP43576 117 aa-0.25□□□□□ -2.45
VPS20YMR077C GPI14P47088 403 aaKnown RBP-0.25□□□□□ -2.45
VPS20YMR077C HHT1P61830 136 aa-0.25□□□□□ -2.45
VPS20YMR077C YHP1Q04116 353 aa-0.25□□□□□ -2.45
Retrieved 100 of 5,963 RNA–protein pairs in 71.2 ms