RNA–Protein interactions for RNA: YKL193C

SDS22, Transcript of Regulatory subunit of the type 1 protein phosphatase (PP1) Glc7p, yeast

Gene SDS22, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDS22	YKL193C	FIT2	Q08906	153 aa		0.89	□□□□□ -2.27
SDS22	YKL193C	YAR023C	D6VPM8	179 aa		0.88	□□□□□ -2.27
SDS22	YKL193C	RPB7	P34087	171 aa		0.88	□□□□□ -2.27
SDS22	YKL193C	PGA2	P53903	129 aa		0.88	□□□□□ -2.27
SDS22	YKL193C	YMR099C	Q03161	297 aa	Known RBP	0.88	□□□□□ -2.27
SDS22	YKL193C	DYN3	Q04949	312 aa		0.88	□□□□□ -2.27
SDS22	YKL193C	RUD3	Q12234	484 aa	Known RBP	0.88	□□□□□ -2.27
SDS22	YKL193C	MBF1	O14467	151 aa	Known RBP	0.87	□□□□□ -2.27
SDS22	YKL193C	HTB1	P02293	131 aa	Known RBP	0.87	□□□□□ -2.27
SDS22	YKL193C	HTB2	P02294	131 aa		0.87	□□□□□ -2.27
SDS22	YKL193C	YPK2	P18961	677 aa		0.87	□□□□□ -2.27
SDS22	YKL193C	YER134C	P40081	178 aa		0.87	□□□□□ -2.27
SDS22	YKL193C	ARP3	P47117	449 aa	Known RBP	0.87	□□□□□ -2.27
SDS22	YKL193C	YLR460C	P54007	376 aa		0.87	□□□□□ -2.27
SDS22	YKL193C	BNA7	Q04066	261 aa		0.87	□□□□□ -2.27
SDS22	YKL193C	FUS2	Q05670	677 aa		0.87	□□□□□ -2.27
SDS22	YKL193C	SLH1	P53327	1967 aa	Known RBP	0.87	□□□□□ -2.27
SDS22	YKL193C	CDC36	P06100	191 aa	Predicted RBP	0.86	□□□□□ -2.27
SDS22	YKL193C	AIM2	P39721	246 aa		0.86	□□□□□ -2.27
SDS22	YKL193C	UBC12	P52491	188 aa		0.86	□□□□□ -2.27
SDS22	YKL193C	THG1	P53215	237 aa	Known RBP	0.86	□□□□□ -2.27
SDS22	YKL193C	YMR295C	Q03559	197 aa		0.86	□□□□□ -2.27
SDS22	YKL193C	YPR013C	Q12145	317 aa		0.86	□□□□□ -2.27
SDS22	YKL193C	COA3	Q3E7B2	85 aa		0.86	□□□□□ -2.27
SDS22	YKL193C	MRS1	P07266	363 aa		0.85	□□□□□ -2.27
SDS22	YKL193C	ASF2	P32448	525 aa	Predicted RBP	0.85	□□□□□ -2.27
SDS22	YKL193C	MTW1	P39731	289 aa		0.85	□□□□□ -2.27
SDS22	YKL193C	LCL2	Q08045	131 aa		0.85	□□□□□ -2.27
SDS22	YKL193C	YOL014W	Q08110	124 aa		0.85	□□□□□ -2.27
SDS22	YKL193C	YCL012C	Q8J0M4	134 aa		0.85	□□□□□ -2.27
SDS22	YKL193C	ACC1	Q00955	2233 aa	Known RBP	0.84	□□□□□ -2.27
SDS22	YKL193C	PAM17	P36147	197 aa		0.84	□□□□□ -2.27
SDS22	YKL193C	RFC4	P40339	323 aa	Known RBP	0.84	□□□□□ -2.27
SDS22	YKL193C	UPS3	Q04006	179 aa		0.84	□□□□□ -2.27
SDS22	YKL193C	RNH1	Q04740	348 aa		0.84	□□□□□ -2.27
SDS22	YKL193C	YJR111C	P47148	283 aa	Known RBP	0.83	□□□□□ -2.28
SDS22	YKL193C	YNL033W	P53964	284 aa		0.83	□□□□□ -2.28
SDS22	YKL193C	DIG2	Q03373	323 aa	Known RBP	0.83	□□□□□ -2.28
SDS22	YKL193C	SHH3	Q04487	196 aa		0.83	□□□□□ -2.28
SDS22	YKL193C	NAT3	Q06504	195 aa		0.83	□□□□□ -2.28
SDS22	YKL193C	MGT1	P26188	188 aa		0.82	□□□□□ -2.28
SDS22	YKL193C	ARO7	P32178	256 aa		0.82	□□□□□ -2.28
SDS22	YKL193C	ALB1	P47019	175 aa	Predicted RBP	0.82	□□□□□ -2.28
SDS22	YKL193C	MMS2	P53152	137 aa		0.82	□□□□□ -2.28
SDS22	YKL193C	YML100W-A	Q8TGT0	57 aa		0.82	□□□□□ -2.28
SDS22	YKL193C	TIR1	P10863	254 aa		0.81	□□□□□ -2.28
SDS22	YKL193C	CBF1	P17106	351 aa		0.81	□□□□□ -2.28
SDS22	YKL193C	STP22	P25604	385 aa		0.81	□□□□□ -2.28
SDS22	YKL193C	SFK1	P35735	353 aa		0.81	□□□□□ -2.28
SDS22	YKL193C	YDR391C	Q04170	232 aa		0.81	□□□□□ -2.28
SDS22	YKL193C	SEN2	P16658	377 aa		0.8	□□□□□ -2.28
SDS22	YKL193C	GSP2	P32836	220 aa	Known RBP	0.8	□□□□□ -2.28
SDS22	YKL193C	FMP23	P38231	175 aa		0.8	□□□□□ -2.28
SDS22	YKL193C	NOP19	P53317	196 aa	Predicted RBP	0.8	□□□□□ -2.28
SDS22	YKL193C	YNL184C	P53876	108 aa		0.8	□□□□□ -2.28
SDS22	YKL193C	YMR253C	Q04835	414 aa		0.8	□□□□□ -2.28
SDS22	YKL193C	SNF4	P12904	322 aa		0.79	□□□□□ -2.28
SDS22	YKL193C	MRPL15	P36523	253 aa		0.79	□□□□□ -2.28
SDS22	YKL193C	CUP9	P41817	306 aa		0.79	□□□□□ -2.28
SDS22	YKL193C	TIM11	P81449	96 aa	Predicted RBP	0.79	□□□□□ -2.28
SDS22	YKL193C	YLR031W	Q07978	186 aa		0.79	□□□□□ -2.28
SDS22	YKL193C	YLR036C	Q07986	203 aa		0.79	□□□□□ -2.28
SDS22	YKL193C	MATALPHA2	P0CY08	210 aa		0.78	□□□□□ -2.28
SDS22	YKL193C	HMLALPHA2	P0CY09	210 aa		0.78	□□□□□ -2.28
SDS22	YKL193C	UBC8	P28263	218 aa		0.78	□□□□□ -2.28
SDS22	YKL193C	SPC25	P40014	221 aa		0.78	□□□□□ -2.28
SDS22	YKL193C	PDS1	P40316	373 aa	Predicted RBP	0.78	□□□□□ -2.28
SDS22	YKL193C	YFL019C	P43576	117 aa		0.78	□□□□□ -2.28
SDS22	YKL193C	MET31	Q03081	177 aa		0.78	□□□□□ -2.28
SDS22	YKL193C	YMR226C	Q05016	267 aa	Known RBP	0.78	□□□□□ -2.28
SDS22	YKL193C	ABP140	Q08641	628 aa	Known RBP	0.78	□□□□□ -2.28
SDS22	YKL193C	YPR203W	Q08994	102 aa		0.78	□□□□□ -2.28
SDS22	YKL193C	PST2	Q12335	198 aa	Known RBP	0.78	□□□□□ -2.28
SDS22	YKL193C	FAS1	P07149	2051 aa	Known RBP	0.77	□□□□□ -2.29
SDS22	YKL193C	RPB4	P20433	221 aa	Predicted RBP	0.77	□□□□□ -2.29
SDS22	YKL193C	IDP1	P21954	428 aa	Known RBP	0.77	□□□□□ -2.29
SDS22	YKL193C	TDA4	P47153	279 aa		0.77	□□□□□ -2.29
SDS22	YKL193C	YMR315W	Q04869	349 aa	Known RBP	0.77	□□□□□ -2.29
SDS22	YKL193C	TAR1	Q8TGM6	124 aa		0.77	□□□□□ -2.29
SDS22	YKL193C	IGO2	Q9P305	131 aa		0.77	□□□□□ -2.29
SDS22	YKL193C	QCR7	P00128	127 aa		0.76	□□□□□ -2.29
SDS22	YKL193C	YBR242W	P38331	238 aa		0.76	□□□□□ -2.29
SDS22	YKL193C	VPS71	Q03433	280 aa		0.76	□□□□□ -2.29
SDS22	YKL193C	YCR023C	P25351	611 aa		0.75	□□□□□ -2.29
SDS22	YKL193C	GPI14	P47088	403 aa	Known RBP	0.75	□□□□□ -2.29
SDS22	YKL193C	MRPS17	Q03246	237 aa	Predicted RBP	0.75	□□□□□ -2.29
SDS22	YKL193C	RRP17	Q04031	235 aa	Predicted RBP	0.75	□□□□□ -2.29
SDS22	YKL193C	ARO80	Q04052	950 aa		0.75	□□□□□ -2.29
SDS22	YKL193C	GET4	Q12125	312 aa		0.75	□□□□□ -2.29
SDS22	YKL193C	STF2	P16965	84 aa		0.74	□□□□□ -2.29
SDS22	YKL193C	UGX2	P32772	223 aa		0.74	□□□□□ -2.29
SDS22	YKL193C	YHL037C	P38733	133 aa		0.74	□□□□□ -2.29
SDS22	YKL193C	ADF1	Q2V2Q1	113 aa		0.74	□□□□□ -2.29
SDS22	YKL193C	NTG1	P31378	399 aa		0.73	□□□□□ -2.29
SDS22	YKL193C	MAK5	P38112	773 aa	Predicted RBP	0.73	□□□□□ -2.29
SDS22	YKL193C	MPM1	P40364	252 aa		0.73	□□□□□ -2.29
SDS22	YKL193C	TMA22	P47089	198 aa	Predicted RBP	0.73	□□□□□ -2.29
SDS22	YKL193C	AHT1	P29589	182 aa		0.72	□□□□□ -2.29
SDS22	YKL193C	YKT6	P36015	200 aa	Known RBP	0.72	□□□□□ -2.29
SDS22	YKL193C	YFL051C	P43552	160 aa		0.72	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 143.1 ms