RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W ARC15P40518 154 aaRIP-Chip data2.89□□□□□ -1.95not detected
UBP12YJL197W SER2P42941 309 aa2.89□□□□□ -1.95
UBP12YJL197W RPL9BP51401 191 aaKnown RBP2.89□□□□□ -1.95
UBP12YJL197W YGL260WP53056 76 aa2.89□□□□□ -1.95
UBP12YJL197W ATG39Q06159 398 aa2.89□□□□□ -1.95
UBP12YJL197W MCH1Q07376 486 aa2.89□□□□□ -1.95
UBP12YJL197W TAD3Q9URQ3 322 aa2.89□□□□□ -1.95
UBP12YJL197W SFK1P35735 353 aa2.89□□□□□ -1.95
UBP12YJL197W AUS1Q08409 1394 aa2.88□□□□□ -1.95
UBP12YJL197W SHE2P36068 246 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
UBP12YJL197W YER134CP40081 178 aa2.88□□□□□ -1.95
UBP12YJL197W FCF1Q05498 189 aaPredicted RBP2.88□□□□□ -1.95
UBP12YJL197W IES4Q08561 116 aa2.88□□□□□ -1.95
UBP12YJL197W VMA11P32842 164 aa2.88□□□□□ -1.95
UBP12YJL197W IES3Q12345 250 aa2.88□□□□□ -1.95
UBP12YJL197W HSL1P34244 1518 aa2.88□□□□□ -1.95
UBP12YJL197W YPT53P36019 220 aa2.88□□□□□ -1.95
UBP12YJL197W YHR125WP38831 101 aa2.88□□□□□ -1.95
UBP12YJL197W ORM1P53224 222 aa2.88□□□□□ -1.95
UBP12YJL197W ALG9P53868 555 aaKnown RBP2.88□□□□□ -1.95
UBP12YJL197W COF1Q03048 143 aaKnown RBP2.88□□□□□ -1.95
UBP12YJL197W FLO11P08640 1367 aa2.88□□□□□ -1.95
UBP12YJL197W RPS19AP07280 144 aaKnown RBP2.87□□□□□ -1.95
UBP12YJL197W RPS19BP07281 144 aaPredicted RBP2.87□□□□□ -1.95
UBP12YJL197W RPL30P14120 105 aaKnown RBP2.87□□□□□ -1.95
UBP12YJL197W YPL073CP40323 161 aa2.87□□□□□ -1.95
UBP12YJL197W FRQ1Q06389 190 aa2.87□□□□□ -1.95
UBP12YJL197W BNI1P41832 1953 aa2.87□□□□□ -1.95
UBP12YJL197W YFR045WP43617 309 aa2.87□□□□□ -1.95
UBP12YJL197W SOL1P50278 321 aa2.87□□□□□ -1.95
UBP12YJL197W LTE1P07866 1435 aa2.87□□□□□ -1.95
UBP12YJL197W YDR366CP87287 132 aa2.87□□□□□ -1.95
UBP12YJL197W SPG3Q04398 127 aaPredicted RBP2.87□□□□□ -1.95
UBP12YJL197W BPT1P14772 1559 aa2.87□□□□□ -1.95
UBP12YJL197W ATP15P21306 62 aa2.86□□□□□ -1.95
UBP12YJL197W ADH1P00330 348 aaKnown RBP2.86□□□□□ -1.95
UBP12YJL197W DSK2P48510 373 aa2.86□□□□□ -1.95
UBP12YJL197W YGR039WP53225 103 aa2.86□□□□□ -1.95
UBP12YJL197W SDH7Q04401 133 aa2.86□□□□□ -1.95
UBP12YJL197W NKP2Q06162 153 aa2.86□□□□□ -1.95
UBP12YJL197W ODC2Q99297 307 aa2.86□□□□□ -1.95
UBP12YJL197W RPO41P13433 1351 aaKnown RBP2.86□□□□□ -1.95
UBP12YJL197W YGR026WP53217 278 aa2.86□□□□□ -1.95
UBP12YJL197W TIM13P53299 105 aa2.86□□□□□ -1.95
UBP12YJL197W DIG2Q03373 323 aaKnown RBP2.86□□□□□ -1.95
UBP12YJL197W CNL1Q06333 122 aa2.86□□□□□ -1.95
UBP12YJL197W RIB3Q99258 208 aa2.86□□□□□ -1.95
UBP12YJL197W Q0144Q9ZZW2 109 aa2.86□□□□□ -1.95
UBP12YJL197W CPA1P07258 411 aaKnown RBP2.85□□□□□ -1.95
UBP12YJL197W YER188WP40103 239 aa2.85□□□□□ -1.95
UBP12YJL197W TIM8P57744 87 aa2.85□□□□□ -1.95
UBP12YJL197W TSA2Q04120 196 aa2.85□□□□□ -1.95
UBP12YJL197W MET5P47169 1442 aa2.85□□□□□ -1.95
UBP12YJL197W ESC1Q03661 1658 aaKnown RBP2.85□□□□□ -1.95
UBP12YJL197W CPR5P35176 225 aa2.85□□□□□ -1.95
UBP12YJL197W OPY1P38271 328 aa2.85□□□□□ -1.95
UBP12YJL197W CSH1P38287 376 aa2.85□□□□□ -1.95
UBP12YJL197W APS3P47064 194 aa2.85□□□□□ -1.95
UBP12YJL197W HIR3P47171 1648 aa2.85□□□□□ -1.95
UBP12YJL197W HSP26P15992 214 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
UBP12YJL197W YFL019CP43576 117 aa2.85□□□□□ -1.95
UBP12YJL197W PIN3Q06449 215 aa2.85□□□□□ -1.95
UBP12YJL197W YML100W-AQ8TGT0 57 aa2.85□□□□□ -1.95
UBP12YJL197W YNL200CP40165 246 aaKnown RBP2.84□□□□□ -1.95
UBP12YJL197W GLR1P41921 483 aaKnown RBP2.84□□□□□ -1.95
UBP12YJL197W NAT3Q06504 195 aa2.84□□□□□ -1.95
UBP12YJL197W SPT6P23615 1451 aaKnown RBP2.84□□□□□ -1.95
UBP12YJL197W SLO1Q3E784 85 aa2.84□□□□□ -1.95
UBP12YJL197W RAD10P06838 210 aa2.84□□□□□ -1.96
UBP12YJL197W ATP5P09457 212 aa2.84□□□□□ -1.96
UBP12YJL197W RPS1AP33442 255 aaKnown RBP2.84□□□□□ -1.96
UBP12YJL197W VPS71Q03433 280 aa2.84□□□□□ -1.96
UBP12YJL197W FMN1Q03778 218 aa2.84□□□□□ -1.96
UBP12YJL197W YDR278CQ05612 105 aa2.84□□□□□ -1.96
UBP12YJL197W YCF1P39109 1515 aaKnown RBP2.84□□□□□ -1.96
UBP12YJL197W YAR023CD6VPM8 179 aa2.83□□□□□ -1.96
UBP12YJL197W TIM9O74700 87 aa2.83□□□□□ -1.96
UBP12YJL197W PAN3P36102 679 aaPredicted RBP2.83□□□□□ -1.96
UBP12YJL197W MRPL17P36528 281 aa2.83□□□□□ -1.96
UBP12YJL197W YER181CP40097 107 aa2.83□□□□□ -1.96
UBP12YJL197W YFR054CP43622 192 aa2.83□□□□□ -1.96
UBP12YJL197W CAB4P53332 305 aa2.83□□□□□ -1.96
UBP12YJL197W HHO1P53551 258 aa2.83□□□□□ -1.96
UBP12YJL197W SLM2P53955 656 aa2.83□□□□□ -1.96
UBP12YJL197W YOL014WQ08110 124 aa2.83□□□□□ -1.96
UBP12YJL197W RPA190P10964 1664 aaKnown RBP2.83□□□□□ -1.96
UBP12YJL197W HIS3P06633 220 aa2.83□□□□□ -1.96
UBP12YJL197W MRP49P32388 137 aa2.83□□□□□ -1.96
UBP12YJL197W ECO1P43605 281 aa2.83□□□□□ -1.96
UBP12YJL197W YOR214CQ12282 236 aa2.83□□□□□ -1.96
UBP12YJL197W SAS5Q99314 248 aa2.83□□□□□ -1.96
UBP12YJL197W VMA7P39111 118 aa2.83□□□□□ -1.96
UBP12YJL197W FCY21P40039 528 aa2.83□□□□□ -1.96
UBP12YJL197W GVP36P40531 326 aaKnown RBP2.83□□□□□ -1.96
UBP12YJL197W YFL012WP43580 148 aa2.83□□□□□ -1.96
UBP12YJL197W GLC8P41818 229 aa2.82□□□□□ -1.96
UBP12YJL197W YEL045CP32616 141 aa2.82□□□□□ -1.96
UBP12YJL197W FIP1P45976 327 aa2.82□□□□□ -1.96
UBP12YJL197W VTC1P40046 129 aaRIP-Chip data2.82□□□□□ -1.96not detected
UBP12YJL197W PRE5P40302 234 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 25 ms