RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C YPL225WQ08971 146 aaKnown RBP1.58□□□□□ -2.16
RTT101YJL047C YOR020W-AQ3E824 90 aa1.58□□□□□ -2.16
RTT101YJL047C TIR1P10863 254 aa1.58□□□□□ -2.16
RTT101YJL047C BUD23P25627 275 aaPredicted RBP1.58□□□□□ -2.16
RTT101YJL047C HYM1P32464 399 aa1.58□□□□□ -2.16
RTT101YJL047C PAN3P36102 679 aaPredicted RBP1.58□□□□□ -2.16
RTT101YJL047C MRPL24P36525 258 aaPredicted RBP1.58□□□□□ -2.16
RTT101YJL047C VMA7P39111 118 aa1.58□□□□□ -2.16
RTT101YJL047C FCY21P40039 528 aa1.58□□□□□ -2.16
RTT101YJL047C TIF34P40217 347 aaKnown RBP1.58□□□□□ -2.16
RTT101YJL047C YJL218WP40892 196 aaKnown RBP1.58□□□□□ -2.16
RTT101YJL047C SER2P42941 309 aa1.58□□□□□ -2.16
RTT101YJL047C YFL019CP43576 117 aa1.58□□□□□ -2.16
RTT101YJL047C IGD1P43598 195 aa1.58□□□□□ -2.16
RTT101YJL047C TDA4P47153 279 aa1.58□□□□□ -2.16
RTT101YJL047C APJ1P53940 528 aa1.58□□□□□ -2.16
RTT101YJL047C DIG2Q03373 323 aaKnown RBP1.58□□□□□ -2.16
RTT101YJL047C FYV7Q12247 151 aa1.58□□□□□ -2.16
RTT101YJL047C YAL067W-AQ8TGK6 75 aa1.58□□□□□ -2.16
RTT101YJL047C FLO11P08640 1367 aa1.57□□□□□ -2.16
RTT101YJL047C FMP49A0A023PZB3 126 aa1.57□□□□□ -2.16
RTT101YJL047C ASK1P35734 292 aa1.57□□□□□ -2.16
RTT101YJL047C YKR070WP36151 352 aaKnown RBP1.57□□□□□ -2.16
RTT101YJL047C YHR140WP38842 239 aa1.57□□□□□ -2.16
RTT101YJL047C RGI1P40043 161 aaPredicted RBP1.57□□□□□ -2.16
RTT101YJL047C YER181CP40097 107 aa1.57□□□□□ -2.16
RTT101YJL047C YNL200CP40165 246 aaKnown RBP1.57□□□□□ -2.16
RTT101YJL047C REE1P40893 198 aa1.57□□□□□ -2.16
RTT101YJL047C HHO1P53551 258 aa1.57□□□□□ -2.16
RTT101YJL047C RSM10Q03201 203 aa1.57□□□□□ -2.16
RTT101YJL047C IRC25Q07951 179 aa1.57□□□□□ -2.16
RTT101YJL047C SLD7Q08457 257 aa1.57□□□□□ -2.16
RTT101YJL047C FYV12Q08559 129 aa1.57□□□□□ -2.16
RTT101YJL047C YML100W-AQ8TGT0 57 aa1.57□□□□□ -2.16
RTT101YJL047C TAD3Q9URQ3 322 aa1.57□□□□□ -2.16
RTT101YJL047C ATP5P09457 212 aa1.57□□□□□ -2.16
RTT101YJL047C DDI2P0CH63 225 aa1.57□□□□□ -2.16
RTT101YJL047C DDI3P0CH64 225 aa1.57□□□□□ -2.16
RTT101YJL047C PHO13P19881 312 aa1.57□□□□□ -2.16
RTT101YJL047C TOM40P23644 387 aaKnown RBP1.57□□□□□ -2.16
RTT101YJL047C SUI1P32911 108 aaKnown RBP1.57□□□□□ -2.16
RTT101YJL047C ASP1P38986 381 aaPredicted RBP1.57□□□□□ -2.16
RTT101YJL047C TEM1P38987 245 aa1.57□□□□□ -2.16
RTT101YJL047C YAR068WP39564 161 aa1.57□□□□□ -2.16
RTT101YJL047C AVT2P39981 480 aa1.57□□□□□ -2.16
RTT101YJL047C RRT13P40042 185 aa1.57□□□□□ -2.16
RTT101YJL047C AYR1P40471 297 aa1.57□□□□□ -2.16
RTT101YJL047C PFS2P42841 465 aaKnown RBP1.57□□□□□ -2.16
RTT101YJL047C YDR366CP87287 132 aa1.57□□□□□ -2.16
RTT101YJL047C AIM36Q03798 255 aa1.57□□□□□ -2.16
RTT101YJL047C YDR391CQ04170 232 aa1.57□□□□□ -2.16
RTT101YJL047C YLR281CQ05863 155 aa1.57□□□□□ -2.16
RTT101YJL047C SPC3Q12133 184 aa1.57□□□□□ -2.16
RTT101YJL047C ATP14Q12349 124 aa1.57□□□□□ -2.16
RTT101YJL047C REP2P03872 296 aa1.56□□□□□ -2.16
RTT101YJL047C SGA1P08019 549 aa1.56□□□□□ -2.16
RTT101YJL047C COX10P21592 462 aa1.56□□□□□ -2.16
RTT101YJL047C BET1P22804 142 aa1.56□□□□□ -2.16
RTT101YJL047C PTC1P35182 281 aa1.56□□□□□ -2.16
RTT101YJL047C YRA2P36036 203 aaKnown RBP RIP-Chip data1.56□□□□□ -2.16not detected
RTT101YJL047C RCN1P36054 211 aa1.56□□□□□ -2.16
RTT101YJL047C SWD3P38123 315 aa1.56□□□□□ -2.16
RTT101YJL047C FYV4P38783 130 aaPredicted RBP1.56□□□□□ -2.16
RTT101YJL047C NSG1P38837 291 aa1.56□□□□□ -2.16
RTT101YJL047C VTC1P40046 129 aaRIP-Chip data1.56□□□□□ -2.16not detected
RTT101YJL047C SFT1P43682 97 aa1.56□□□□□ -2.16
RTT101YJL047C YGR039WP53225 103 aa1.56□□□□□ -2.16
RTT101YJL047C TIM13P53299 105 aa1.56□□□□□ -2.16
RTT101YJL047C SCW4P53334 386 aaKnown RBP1.56□□□□□ -2.16
RTT101YJL047C CGI121Q03705 181 aaKnown RBP1.56□□□□□ -2.16
RTT101YJL047C TVP15Q03860 143 aa1.56□□□□□ -2.16
RTT101YJL047C NKP2Q06162 153 aa1.56□□□□□ -2.16
RTT101YJL047C YLR118CQ12354 227 aa1.56□□□□□ -2.16
RTT101YJL047C PST1Q12355 444 aa1.56□□□□□ -2.16
RTT101YJL047C YOL085CQ99345 113 aa1.56□□□□□ -2.16
RTT101YJL047C PHO85P17157 305 aa1.56□□□□□ -2.16
RTT101YJL047C YBL010CP32788 280 aa1.56□□□□□ -2.16
RTT101YJL047C FMP46P36141 133 aaKnown RBP1.56□□□□□ -2.16
RTT101YJL047C XPT1P47165 209 aa1.56□□□□□ -2.16
RTT101YJL047C SCW10Q04951 389 aa1.56□□□□□ -2.16
RTT101YJL047C FCY1Q12178 158 aa1.56□□□□□ -2.16
RTT101YJL047C SMT3Q12306 101 aaKnown RBP1.56□□□□□ -2.16
RTT101YJL047C PSF1Q12488 208 aa1.56□□□□□ -2.16
RTT101YJL047C BOL1Q3E793 110 aa1.56□□□□□ -2.16
RTT101YJL047C YLR422WQ06409 1932 aa1.56□□□□□ -2.16
RTT101YJL047C URA5P13298 226 aaKnown RBP1.55□□□□□ -2.16
RTT101YJL047C CCA1P21269 546 aa1.55□□□□□ -2.16
RTT101YJL047C RNP1P32385 249 aa1.55□□□□□ -2.16
RTT101YJL047C SNC2P33328 115 aa1.55□□□□□ -2.16
RTT101YJL047C YBL059WP34224 193 aa1.55□□□□□ -2.16
RTT101YJL047C RPL14AP36105 138 aaKnown RBP1.55□□□□□ -2.16
RTT101YJL047C MRPL17P36528 281 aa1.55□□□□□ -2.16
RTT101YJL047C YHL026CP38740 315 aa1.55□□□□□ -2.16
RTT101YJL047C RPL14BP38754 138 aaKnown RBP1.55□□□□□ -2.16
RTT101YJL047C FIS1P40515 155 aa1.55□□□□□ -2.16
RTT101YJL047C MIC19P43594 170 aa1.55□□□□□ -2.16
RTT101YJL047C GPI2P46961 280 aa1.55□□□□□ -2.16
RTT101YJL047C YGL193CP53097 103 aa1.55□□□□□ -2.16
RTT101YJL047C CAX4P53223 239 aa1.55□□□□□ -2.16
RTT101YJL047C APS2Q00381 147 aa1.55□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms