RNA–Protein interactions for RNA: YIL173W

VTH1, Transcript of Putative membrane glycoprotein, yeast

Gene VTH1, Length 4,650 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTH1	YIL173W	CAC2	Q04199	468 aa		4.84	□□□□□ -1.63
VTH1	YIL173W	ARC18	Q05933	178 aa	Known RBP	4.84	□□□□□ -1.63
VTH1	YIL173W	CDC43	P18898	376 aa		4.84	□□□□□ -1.63
VTH1	YIL173W	YCR007C	P25354	239 aa		4.84	□□□□□ -1.63
VTH1	YIL173W	PET18	P25362	215 aa		4.84	□□□□□ -1.63
VTH1	YIL173W	RML2	P32611	393 aa		4.84	□□□□□ -1.63
VTH1	YIL173W	ECM15	P35195	104 aa		4.84	□□□□□ -1.63
VTH1	YIL173W	RPL32	P38061	130 aa	Known RBP	4.84	□□□□□ -1.63
VTH1	YIL173W	YBR220C	P38318	560 aa		4.84	□□□□□ -1.63
VTH1	YIL173W	VRG4	P40107	337 aa		4.84	□□□□□ -1.63
VTH1	YIL173W	YIL059C	P40520	121 aa		4.84	□□□□□ -1.63
VTH1	YIL173W	SMM1	P53720	384 aa	Known RBP	4.84	□□□□□ -1.63
VTH1	YIL173W	DUG3	P53871	357 aa		4.84	□□□□□ -1.63
VTH1	YIL173W	YDR344C	Q05510	147 aa		4.84	□□□□□ -1.63
VTH1	YIL173W	ISR1	Q06098	443 aa	Known RBP	4.84	□□□□□ -1.63
VTH1	YIL173W	YPR147C	Q06522	304 aa	Known RBP	4.84	□□□□□ -1.63
VTH1	YIL173W	YDL242W	Q07746	117 aa		4.84	□□□□□ -1.63
VTH1	YIL173W	RPS22B	Q3E7Y3	130 aa	Known RBP	4.84	□□□□□ -1.63
VTH1	YIL173W	UME6	P39001	836 aa		4.84	□□□□□ -1.63
VTH1	YIL173W	MSO1	P53604	210 aa	Known RBP	4.84	□□□□□ -1.63
VTH1	YIL173W	SLG1	P54867	378 aa		4.84	□□□□□ -1.63
VTH1	YIL173W	UPS3	Q04006	179 aa		4.84	□□□□□ -1.63
VTH1	YIL173W	NAG1	Q8TGN9	163 aa		4.84	□□□□□ -1.63
VTH1	YIL173W	DAT1	P13483	248 aa	Known RBP	4.84	□□□□□ -1.64
VTH1	YIL173W	PRE1	P22141	198 aa	Known RBP	4.84	□□□□□ -1.64
VTH1	YIL173W	WSC4	P38739	605 aa		4.84	□□□□□ -1.64
VTH1	YIL173W	PRE5	P40302	234 aa	Known RBP	4.84	□□□□□ -1.64
VTH1	YIL173W	YGL204C	P53089	101 aa		4.84	□□□□□ -1.64
VTH1	YIL173W	TY2B-LR1	P0C2J3	1770 aa		4.83	□□□□□ -1.64
VTH1	YIL173W	TY2B-F	P0CX63	1770 aa		4.83	□□□□□ -1.64
VTH1	YIL173W	TY2B-GR2	P0CX64	1770 aa		4.83	□□□□□ -1.64
VTH1	YIL173W	TY2B-C	P25384	1770 aa		4.83	□□□□□ -1.64
VTH1	YIL173W	TY2B-DR2	Q03494	1770 aa		4.83	□□□□□ -1.64
VTH1	YIL173W	TY1B-DR1	Q03855	1755 aa		4.83	□□□□□ -1.64
VTH1	YIL173W	TY2B-DR3	Q07791	1770 aa	Known RBP	4.83	□□□□□ -1.64
VTH1	YIL173W	TY2B-OR1	Q12113	1770 aa		4.83	□□□□□ -1.64
VTH1	YIL173W	TY2B-DR1	Q12472	1770 aa		4.83	□□□□□ -1.64
VTH1	YIL173W	TY2B-OR2	Q12501	1770 aa		4.83	□□□□□ -1.64
VTH1	YIL173W	RPL3	P14126	387 aa	Known RBP	4.83	□□□□□ -1.64
VTH1	YIL173W	PPQ1	P32945	549 aa		4.83	□□□□□ -1.64
VTH1	YIL173W	SCW11	P53189	542 aa		4.83	□□□□□ -1.64
VTH1	YIL173W	PPT2	Q12036	173 aa		4.83	□□□□□ -1.64
VTH1	YIL173W	TDH1	P00360	332 aa	Known RBP	4.83	□□□□□ -1.64
VTH1	YIL173W	MIR1	P23641	311 aa	Known RBP	4.83	□□□□□ -1.64
VTH1	YIL173W	RNQ1	P25367	405 aa		4.83	□□□□□ -1.64
VTH1	YIL173W	YKL162C	P36052	402 aa		4.83	□□□□□ -1.64
VTH1	YIL173W	UBS1	P38290	277 aa		4.83	□□□□□ -1.64
VTH1	YIL173W	CFD1	P40558	293 aa		4.83	□□□□□ -1.64
VTH1	YIL173W	VEL1	P53058	206 aa		4.83	□□□□□ -1.64
VTH1	YIL173W	ARR3	Q06598	404 aa		4.83	□□□□□ -1.64
VTH1	YIL173W	LDS2	Q08218	356 aa		4.83	□□□□□ -1.64
VTH1	YIL173W	MED7	Q08278	222 aa		4.83	□□□□□ -1.64
VTH1	YIL173W	WSC3	Q12215	556 aa		4.83	□□□□□ -1.64
VTH1	YIL173W	YHR214C-E	Q8TGK0	99 aa		4.83	□□□□□ -1.64
VTH1	YIL173W	CDC50	P25656	391 aa		4.83	□□□□□ -1.64
VTH1	YIL173W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
VTH1	YIL173W	RPS22A	P0C0W1	130 aa	Known RBP	4.82	□□□□□ -1.64
VTH1	YIL173W	CPR3	P25719	182 aa		4.82	□□□□□ -1.64
VTH1	YIL173W	YJL163C	P46996	555 aa		4.82	□□□□□ -1.64
VTH1	YIL173W	TPC1	P53257	314 aa		4.82	□□□□□ -1.64
VTH1	YIL173W	ARR2	Q06597	130 aa		4.82	□□□□□ -1.64
VTH1	YIL173W	FMT1	P32785	401 aa		4.82	□□□□□ -1.64
VTH1	YIL173W	YER134C	P40081	178 aa		4.82	□□□□□ -1.64
VTH1	YIL173W	ATF1	P40353	525 aa		4.82	□□□□□ -1.64
VTH1	YIL173W	CRR1	Q05790	422 aa		4.82	□□□□□ -1.64
VTH1	YIL173W	YDL211C	Q12121	372 aa		4.82	□□□□□ -1.64
VTH1	YIL173W	CUP2	P15315	225 aa		4.82	□□□□□ -1.64
VTH1	YIL173W	YIL152W	P40455	235 aa		4.82	□□□□□ -1.64
VTH1	YIL173W	YIL024C	P40543	189 aa		4.82	□□□□□ -1.64
VTH1	YIL173W	LST7	P53237	242 aa		4.82	□□□□□ -1.64
VTH1	YIL173W	PFA4	Q12006	378 aa		4.82	□□□□□ -1.64
VTH1	YIL173W	ATG41	Q12048	136 aa		4.82	□□□□□ -1.64
VTH1	YIL173W	RKI1	Q12189	258 aa		4.82	□□□□□ -1.64
VTH1	YIL173W	SWD2	P36104	329 aa	Predicted RBP	4.82	□□□□□ -1.64
VTH1	YIL173W	SHH3	Q04487	196 aa		4.82	□□□□□ -1.64
VTH1	YIL173W	AVO2	Q04749	426 aa		4.82	□□□□□ -1.64
VTH1	YIL173W	HEM25	Q07534	307 aa		4.82	□□□□□ -1.64
VTH1	YIL173W	UTP23	Q12339	254 aa	Known RBP	4.82	□□□□□ -1.64
VTH1	YIL173W	PAU19	P0CE85	124 aa		4.81	□□□□□ -1.64
VTH1	YIL173W	PAU21	P0CE86	164 aa		4.81	□□□□□ -1.64
VTH1	YIL173W	PAU22	P0CE87	164 aa		4.81	□□□□□ -1.64
VTH1	YIL173W	PAU3	P25610	124 aa		4.81	□□□□□ -1.64
VTH1	YIL173W	ZRT1	P32804	376 aa		4.81	□□□□□ -1.64
VTH1	YIL173W	GSP2	P32836	220 aa	Known RBP	4.81	□□□□□ -1.64
VTH1	YIL173W	YPT10	P38146	199 aa		4.81	□□□□□ -1.64
VTH1	YIL173W	SOH1	P38633	127 aa		4.81	□□□□□ -1.64
VTH1	YIL173W	CPD1	P53314	239 aa		4.81	□□□□□ -1.64
VTH1	YIL173W	RAD28	Q12021	506 aa		4.81	□□□□□ -1.64
VTH1	YIL173W	VAR1	P02381	398 aa		4.81	□□□□□ -1.64
VTH1	YIL173W	ERG24	P32462	438 aa	Known RBP	4.81	□□□□□ -1.64
VTH1	YIL173W	GGC1	P38988	300 aa		4.81	□□□□□ -1.64
VTH1	YIL173W	YPS6	P40583	537 aa		4.81	□□□□□ -1.64
VTH1	YIL173W	YMR166C	Q03829	368 aa		4.81	□□□□□ -1.64
VTH1	YIL173W	HPA2	Q06592	156 aa		4.81	□□□□□ -1.64
VTH1	YIL173W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.81	□□□□□ -1.64
VTH1	YIL173W	ILV5	P06168	395 aa	Known RBP	4.81	□□□□□ -1.64
VTH1	YIL173W	RPS23A	P0CX29	145 aa	Known RBP	4.81	□□□□□ -1.64
VTH1	YIL173W	RPS23B	P0CX30	145 aa		4.81	□□□□□ -1.64
VTH1	YIL173W	MRPS16	Q02608	121 aa		4.81	□□□□□ -1.64
VTH1	YIL173W	RSM28	Q03430	361 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 60.4 ms