RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W GMC1Q04399 608 aa4.25□□□□□ -1.73
MSH1YHR120W AVO2Q04749 426 aa4.25□□□□□ -1.73
MSH1YHR120W HOF1Q05080 669 aa4.25□□□□□ -1.73
MSH1YHR120W YLR179CQ06252 201 aaKnown RBP4.25□□□□□ -1.73
MSH1YHR120W YPR108W-AQ3E7B3 70 aa4.25□□□□□ -1.73
MSH1YHR120W PAU19P0CE85 124 aa4.25□□□□□ -1.73
MSH1YHR120W PAU21P0CE86 164 aa4.25□□□□□ -1.73
MSH1YHR120W PAU22P0CE87 164 aa4.25□□□□□ -1.73
MSH1YHR120W PAU3P25610 124 aa4.25□□□□□ -1.73
MSH1YHR120W DEG1P31115 442 aaKnown RBP4.25□□□□□ -1.73
MSH1YHR120W NCA3P46955 337 aa4.25□□□□□ -1.73
MSH1YHR120W YNL046WP53956 172 aa4.25□□□□□ -1.73
MSH1YHR120W FSH2Q05015 223 aa4.25□□□□□ -1.73
MSH1YHR120W RFU1Q08003 200 aa4.25□□□□□ -1.73
MSH1YHR120W YPL264CQ08980 353 aa4.25□□□□□ -1.73
MSH1YHR120W YCR025CP25352 136 aa4.24□□□□□ -1.73
MSH1YHR120W LSB5P25369 354 aa4.24□□□□□ -1.73
MSH1YHR120W YIR020CP40575 100 aa4.24□□□□□ -1.73
MSH1YHR120W YGL185CP53100 379 aa4.24□□□□□ -1.73
MSH1YHR120W YDC1Q02896 317 aa4.24□□□□□ -1.73
MSH1YHR120W CUE4Q04201 117 aaPredicted RBP4.24□□□□□ -1.73
MSH1YHR120W USB1Q12208 290 aaKnown RBP4.24□□□□□ -1.73
MSH1YHR120W PRR2Q12310 699 aa4.24□□□□□ -1.73
MSH1YHR120W YOP1Q12402 180 aa4.24□□□□□ -1.73
MSH1YHR120W SPS4P09937 338 aa4.24□□□□□ -1.73
MSH1YHR120W MSI1P13712 422 aa4.24□□□□□ -1.73
MSH1YHR120W FRS1P15624 595 aaKnown RBP4.24□□□□□ -1.73
MSH1YHR120W PRE9P23638 258 aaKnown RBP4.24□□□□□ -1.73
MSH1YHR120W AHT1P29589 182 aa4.24□□□□□ -1.73
MSH1YHR120W RPB7P34087 171 aa4.24□□□□□ -1.73
MSH1YHR120W SSS1P35179 80 aa4.24□□□□□ -1.73
MSH1YHR120W ARC40P38328 384 aaKnown RBP4.24□□□□□ -1.73
MSH1YHR120W YHL044WP38727 235 aa4.24□□□□□ -1.73
MSH1YHR120W PEX7P39108 375 aa4.24□□□□□ -1.73
MSH1YHR120W YND1P40009 630 aa4.24□□□□□ -1.73
MSH1YHR120W RFC2P40348 353 aa4.24□□□□□ -1.73
MSH1YHR120W TAX4P47030 604 aa4.24□□□□□ -1.73
MSH1YHR120W PAU4P53427 120 aa4.24□□□□□ -1.73
MSH1YHR120W YDL242WQ07746 117 aa4.24□□□□□ -1.73
MSH1YHR120W YOR015WQ12169 119 aa4.24□□□□□ -1.73
MSH1YHR120W FRE8Q12209 686 aa4.24□□□□□ -1.73
MSH1YHR120W COA6Q3E846 104 aa4.24□□□□□ -1.73
MSH1YHR120W RPL30P14120 105 aaKnown RBP4.24□□□□□ -1.73
MSH1YHR120W REC114P32841 428 aa4.24□□□□□ -1.73
MSH1YHR120W YUH1P35127 236 aa4.24□□□□□ -1.73
MSH1YHR120W GET2P40056 285 aa4.24□□□□□ -1.73
MSH1YHR120W AIM24P47127 394 aa4.24□□□□□ -1.73
MSH1YHR120W RDL1Q12305 139 aaKnown RBP4.24□□□□□ -1.73
MSH1YHR120W HUT1Q12520 339 aa4.24□□□□□ -1.73
MSH1YHR120W RPL39P04650 51 aa4.23□□□□□ -1.73
MSH1YHR120W GDH1P07262 454 aaKnown RBP4.23□□□□□ -1.73
MSH1YHR120W CDC50P25656 391 aa4.23□□□□□ -1.73
MSH1YHR120W ERV1P27882 189 aa4.23□□□□□ -1.73
MSH1YHR120W HSP10P38910 106 aa4.23□□□□□ -1.73
MSH1YHR120W SMM1P53720 384 aaKnown RBP4.23□□□□□ -1.73
MSH1YHR120W YPR098CQ06089 161 aa4.23□□□□□ -1.73
MSH1YHR120W AGC1Q12482 902 aa4.23□□□□□ -1.73
MSH1YHR120W MRS4P23500 304 aa4.23□□□□□ -1.73
MSH1YHR120W FIG1P38224 298 aa4.23□□□□□ -1.73
MSH1YHR120W PRS2P38620 318 aaKnown RBP4.23□□□□□ -1.73
MSH1YHR120W FLO5P38894 1075 aa4.23□□□□□ -1.73
MSH1YHR120W COX15P40086 486 aa4.23□□□□□ -1.73
MSH1YHR120W YMR090WQ04304 227 aaKnown RBP4.23□□□□□ -1.73
MSH1YHR120W TDA6Q06466 467 aa4.23□□□□□ -1.73
MSH1YHR120W DCN1Q12395 269 aa4.23□□□□□ -1.73
MSH1YHR120W SCM4P32564 187 aa4.22□□□□□ -1.73
MSH1YHR120W SHB17P36136 271 aaKnown RBP4.22□□□□□ -1.73
MSH1YHR120W PAU5P43575 122 aa4.22□□□□□ -1.73
MSH1YHR120W CYT2Q00873 224 aa4.22□□□□□ -1.73
MSH1YHR120W RAX2Q12465 1220 aa4.22□□□□□ -1.73
MSH1YHR120W PAU1P0CE88 120 aa4.22□□□□□ -1.73
MSH1YHR120W PAU14P0CE89 120 aa4.22□□□□□ -1.73
MSH1YHR120W PAU6P0CE90 120 aa4.22□□□□□ -1.73
MSH1YHR120W PAU18P0CE91 120 aa4.22□□□□□ -1.73
MSH1YHR120W PAU8P0CE92 120 aa4.22□□□□□ -1.73
MSH1YHR120W PAU11P0CE93 120 aa4.22□□□□□ -1.73
MSH1YHR120W NHP6AP11632 93 aaKnown RBP4.22□□□□□ -1.73
MSH1YHR120W SAG1P20840 650 aa4.22□□□□□ -1.73
MSH1YHR120W DAL3P32459 195 aa4.22□□□□□ -1.73
MSH1YHR120W ACP1P32463 125 aa4.22□□□□□ -1.73
MSH1YHR120W YNK1P36010 153 aaKnown RBP4.22□□□□□ -1.73
MSH1YHR120W PAU13P38725 120 aa4.22□□□□□ -1.73
MSH1YHR120W CTR2P38865 189 aa4.22□□□□□ -1.73
MSH1YHR120W YGL114WP53134 725 aa4.22□□□□□ -1.73
MSH1YHR120W PAU10Q03050 120 aa4.22□□□□□ -1.73
MSH1YHR120W PAU20Q08322 120 aa4.22□□□□□ -1.73
MSH1YHR120W YCL048W-AQ2V2Q2 79 aa4.22□□□□□ -1.73
MSH1YHR120W PAU9Q3E770 120 aa4.22□□□□□ -1.73
MSH1YHR120W YLL053CP0CD98 152 aa4.21□□□□□ -1.73
MSH1YHR120W MRPL44P19956 98 aa4.21□□□□□ -1.73
MSH1YHR120W YOX1P34161 385 aa4.21□□□□□ -1.73
MSH1YHR120W MRPL28P36527 147 aa4.21□□□□□ -1.73
MSH1YHR120W BNA2P47125 453 aa4.21□□□□□ -1.73
MSH1YHR120W HNT2P49775 206 aa4.21□□□□□ -1.73
MSH1YHR120W PRP11Q07350 266 aaPredicted RBP4.21□□□□□ -1.73
MSH1YHR120W YOR186WQ08560 144 aa4.21□□□□□ -1.73
MSH1YHR120W FCY22Q12119 530 aa4.21□□□□□ -1.73
MSH1YHR120W URA2P07259 2214 aaKnown RBP4.21□□□□□ -1.74
MSH1YHR120W ALK2P32789 676 aaPredicted RBP4.21□□□□□ -1.74
MSH1YHR120W SLX9P53251 210 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms