RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W TUB4P53378 473 aa3.22□□□□□ -1.89
SPT6YGR116W YNR048WP53740 393 aa3.22□□□□□ -1.89
SPT6YGR116W YDL157CQ12082 118 aa3.22□□□□□ -1.89
SPT6YGR116W YLR050CQ12155 161 aaKnown RBP3.22□□□□□ -1.89
SPT6YGR116W YLR363W-AQ3E747 85 aa3.22□□□□□ -1.89
SPT6YGR116W YPR170W-BP0C5R9 85 aa3.21□□□□□ -1.89
SPT6YGR116W RPB8P20436 146 aa3.21□□□□□ -1.89
SPT6YGR116W AIM17P23180 465 aaKnown RBP3.21□□□□□ -1.89
SPT6YGR116W SEC72P39742 193 aaKnown RBP3.21□□□□□ -1.89
SPT6YGR116W YER134CP40081 178 aa3.21□□□□□ -1.89
SPT6YGR116W HAC1P41546 238 aa3.21□□□□□ -1.89
SPT6YGR116W YNL165WP53891 406 aa3.21□□□□□ -1.89
SPT6YGR116W YDR444WQ04093 687 aa3.21□□□□□ -1.89
SPT6YGR116W TSA2Q04120 196 aa3.21□□□□□ -1.89
SPT6YGR116W MIM1Q08176 113 aa3.21□□□□□ -1.89
SPT6YGR116W OCH1P31755 480 aa3.21□□□□□ -1.9
SPT6YGR116W RAD23P32628 398 aaKnown RBP3.21□□□□□ -1.9
SPT6YGR116W ALG14P38242 237 aa3.21□□□□□ -1.9
SPT6YGR116W FYV4P38783 130 aaPredicted RBP3.21□□□□□ -1.9
SPT6YGR116W LOC1P43586 204 aaPredicted RBP3.21□□□□□ -1.9
SPT6YGR116W OPI10Q08202 246 aa3.21□□□□□ -1.9
SPT6YGR116W IRC13Q08630 104 aa3.21□□□□□ -1.9
SPT6YGR116W FRE8Q12209 686 aa3.21□□□□□ -1.9
SPT6YGR116W CDC36P06100 191 aaPredicted RBP3.21□□□□□ -1.9
SPT6YGR116W YLL053CP0CD98 152 aa3.21□□□□□ -1.9
SPT6YGR116W RPI1P23250 407 aaKnown RBP3.21□□□□□ -1.9
SPT6YGR116W SWD2P36104 329 aaPredicted RBP3.21□□□□□ -1.9
SPT6YGR116W DAL4Q04895 635 aa3.21□□□□□ -1.9
SPT6YGR116W HNT3Q08702 217 aa3.21□□□□□ -1.9
SPT6YGR116W GAL7P08431 366 aa3.21□□□□□ -1.9
SPT6YGR116W MRS4P23500 304 aa3.21□□□□□ -1.9
SPT6YGR116W VMA3P25515 160 aa3.21□□□□□ -1.9
SPT6YGR116W CWP1P28319 239 aa3.21□□□□□ -1.9
SPT6YGR116W AGA2P32781 87 aa3.21□□□□□ -1.9
SPT6YGR116W SOF1P33750 489 aaKnown RBP3.21□□□□□ -1.9
SPT6YGR116W YUH1P35127 236 aa3.21□□□□□ -1.9
SPT6YGR116W OM14P38325 134 aa3.21□□□□□ -1.9
SPT6YGR116W TEM1P38987 245 aa3.21□□□□□ -1.9
SPT6YGR116W PAC1P39946 494 aaKnown RBP3.21□□□□□ -1.9
SPT6YGR116W YER188WP40103 239 aa3.21□□□□□ -1.9
SPT6YGR116W YGL230CP53074 147 aa3.21□□□□□ -1.9
SPT6YGR116W STP3Q05937 343 aa3.21□□□□□ -1.9
SPT6YGR116W YPR098CQ06089 161 aa3.21□□□□□ -1.9
SPT6YGR116W WSC4P38739 605 aa3.2□□□□□ -1.9
SPT6YGR116W GPP2P40106 250 aaKnown RBP3.2□□□□□ -1.9
SPT6YGR116W OSW5P40219 148 aa3.2□□□□□ -1.9
SPT6YGR116W IZH1Q03419 316 aa3.2□□□□□ -1.9
SPT6YGR116W RIM9Q04734 239 aa3.2□□□□□ -1.9
SPT6YGR116W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
SPT6YGR116W YOR343CQ12484 108 aa3.2□□□□□ -1.9
SPT6YGR116W HMRA1P0CY11 126 aa3.2□□□□□ -1.9
SPT6YGR116W FMO1P38866 432 aa3.2□□□□□ -1.9
SPT6YGR116W DFG10P40526 253 aa3.2□□□□□ -1.9
SPT6YGR116W ARP3P47117 449 aaKnown RBP3.2□□□□□ -1.9
SPT6YGR116W RHO5P53879 331 aaKnown RBP3.2□□□□□ -1.9
SPT6YGR116W IZH3Q07959 543 aa3.2□□□□□ -1.9
SPT6YGR116W MCH4Q08268 501 aa3.2□□□□□ -1.9
SPT6YGR116W HAA1Q12753 694 aaKnown RBP3.2□□□□□ -1.9
SPT6YGR116W YPR108W-AQ3E7B3 70 aa3.2□□□□□ -1.9
SPT6YGR116W Q0144Q9ZZW2 109 aa3.2□□□□□ -1.9
SPT6YGR116W MES1P00958 751 aaKnown RBP3.2□□□□□ -1.9
SPT6YGR116W CPR1P14832 162 aaKnown RBP3.2□□□□□ -1.9
SPT6YGR116W SCO1P23833 295 aa3.2□□□□□ -1.9
SPT6YGR116W YCR025CP25352 136 aa3.2□□□□□ -1.9
SPT6YGR116W YBL059WP34224 193 aa3.2□□□□□ -1.9
SPT6YGR116W YLR460CP54007 376 aa3.2□□□□□ -1.9
SPT6YGR116W LEE1Q02799 301 aaKnown RBP3.2□□□□□ -1.9
SPT6YGR116W FSF1Q12029 327 aaKnown RBP3.2□□□□□ -1.9
SPT6YGR116W USB1Q12208 290 aaKnown RBP3.2□□□□□ -1.9
SPT6YGR116W YER190C-BP0CX94 160 aa3.19□□□□□ -1.9
SPT6YGR116W YEL077W-AP0CX95 160 aa3.19□□□□□ -1.9
SPT6YGR116W YGR296C-BP0CX96 160 aa3.19□□□□□ -1.9
SPT6YGR116W YPL283W-BP0CX97 160 aa3.19□□□□□ -1.9
SPT6YGR116W YPR204C-AP0CX98 160 aa3.19□□□□□ -1.9
SPT6YGR116W MSI1P13712 422 aa3.19□□□□□ -1.9
SPT6YGR116W FCY2P17064 533 aa3.19□□□□□ -1.9
SPT6YGR116W FEN2P25621 512 aaKnown RBP3.19□□□□□ -1.9
SPT6YGR116W EMP70P32802 667 aa3.19□□□□□ -1.9
SPT6YGR116W MTR2P34232 184 aaKnown RBP3.19□□□□□ -1.9
SPT6YGR116W UME6P39001 836 aa3.19□□□□□ -1.9
SPT6YGR116W COX15P40086 486 aa3.19□□□□□ -1.9
SPT6YGR116W MID1P41821 548 aa3.19□□□□□ -1.9
SPT6YGR116W TAF4P50105 388 aa3.19□□□□□ -1.9
SPT6YGR116W AQR1P53943 586 aa3.19□□□□□ -1.9
SPT6YGR116W YML053CQ04978 212 aa3.19□□□□□ -1.9
SPT6YGR116W YPR147CQ06522 304 aaKnown RBP3.19□□□□□ -1.9
SPT6YGR116W HRD1Q08109 551 aa3.19□□□□□ -1.9
SPT6YGR116W Q0182Q9ZZW1 134 aa3.19□□□□□ -1.9
SPT6YGR116W YIL012WP40551 113 aa3.19□□□□□ -1.9
SPT6YGR116W MIC27P50945 234 aa3.19□□□□□ -1.9
SPT6YGR116W YIP5P53108 310 aa3.19□□□□□ -1.9
SPT6YGR116W YNR061CP53747 219 aa3.19□□□□□ -1.9
SPT6YGR116W HUG1Q6Q5K6 68 aa3.19□□□□□ -1.9
SPT6YGR116W YBR184WP38299 523 aa3.19□□□□□ -1.9
SPT6YGR116W YBR220CP38318 560 aa3.19□□□□□ -1.9
SPT6YGR116W YIL169CP40442 995 aa3.19□□□□□ -1.9
SPT6YGR116W CAB4P53332 305 aa3.19□□□□□ -1.9
SPT6YGR116W AGE1Q04412 482 aa3.19□□□□□ -1.9
SPT6YGR116W YDR344CQ05510 147 aa3.19□□□□□ -1.9
SPT6YGR116W YFH1Q07540 174 aa3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms