RNA–Protein interactions for RNA: YGL070C

RPB9, Transcript of RNA polymerase II subunit B12.6, yeastyeast

Gene RPB9, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB9YGL070C PLP1Q04004 230 aa2.36□□□□□ -2.03
RPB9YGL070C LDB18Q07887 179 aa2.36□□□□□ -2.03
RPB9YGL070C MSA1Q08471 629 aa2.36□□□□□ -2.03
RPB9YGL070C YPL264CQ08980 353 aa2.36□□□□□ -2.03
RPB9YGL070C AKR2Q12013 749 aa2.36□□□□□ -2.03
RPB9YGL070C YDL211CQ12121 372 aa2.36□□□□□ -2.03
RPB9YGL070C YLR050CQ12155 161 aaKnown RBP2.36□□□□□ -2.03
RPB9YGL070C USB1Q12208 290 aaKnown RBP2.36□□□□□ -2.03
RPB9YGL070C RPS28AQ3E7X9 67 aaPredicted RBP2.36□□□□□ -2.03
RPB9YGL070C YOR020W-AQ3E824 90 aa2.36□□□□□ -2.03
RPB9YGL070C CBP6P07253 162 aaPredicted RBP2.35□□□□□ -2.03
RPB9YGL070C CPT1P17898 393 aa2.35□□□□□ -2.03
RPB9YGL070C RNP1P32385 249 aa2.35□□□□□ -2.03
RPB9YGL070C SRP102P36057 244 aaPredicted RBP2.35□□□□□ -2.03
RPB9YGL070C FMP32P43557 207 aa2.35□□□□□ -2.03
RPB9YGL070C BUD13P46947 266 aaPredicted RBP2.35□□□□□ -2.03
RPB9YGL070C UFD1P53044 361 aa2.35□□□□□ -2.03
RPB9YGL070C JAC1P53193 184 aa2.35□□□□□ -2.03
RPB9YGL070C YPL039WQ03080 316 aa2.35□□□□□ -2.03
RPB9YGL070C SCW10Q04951 389 aa2.35□□□□□ -2.03
RPB9YGL070C YTH1Q06102 208 aaPredicted RBP2.35□□□□□ -2.03
RPB9YGL070C YLR053CQ12026 108 aa2.35□□□□□ -2.03
RPB9YGL070C YOR342CQ12182 319 aa2.35□□□□□ -2.03
RPB9YGL070C SEC4P07560 215 aaKnown RBP2.34□□□□□ -2.03
RPB9YGL070C SNF4P12904 322 aa2.34□□□□□ -2.03
RPB9YGL070C FCY2P17064 533 aa2.34□□□□□ -2.03
RPB9YGL070C RPB9P27999 122 aa2.34□□□□□ -2.03
RPB9YGL070C YEL045CP32616 141 aa2.34□□□□□ -2.03
RPB9YGL070C SKG1P36169 355 aa2.34□□□□□ -2.03
RPB9YGL070C YBL081WP38180 368 aaKnown RBP2.34□□□□□ -2.03
RPB9YGL070C DER1P38307 211 aa2.34□□□□□ -2.03
RPB9YGL070C AIM18P38884 321 aa2.34□□□□□ -2.03
RPB9YGL070C AST2P39945 430 aaKnown RBP2.34□□□□□ -2.03
RPB9YGL070C CUP9P41817 306 aa2.34□□□□□ -2.03
RPB9YGL070C SBH2P52871 88 aa2.34□□□□□ -2.03
RPB9YGL070C YGL235WP53071 178 aa2.34□□□□□ -2.03
RPB9YGL070C NUP49Q02199 472 aa2.34□□□□□ -2.03
RPB9YGL070C MAK3Q03503 176 aa2.34□□□□□ -2.03
RPB9YGL070C YMR315WQ04869 349 aaKnown RBP2.34□□□□□ -2.03
RPB9YGL070C MRX8Q05473 314 aa2.34□□□□□ -2.03
RPB9YGL070C YLR179CQ06252 201 aaKnown RBP2.34□□□□□ -2.03
RPB9YGL070C TIM22Q12328 207 aa2.34□□□□□ -2.03
RPB9YGL070C IES3Q12345 250 aa2.34□□□□□ -2.03
RPB9YGL070C NOT5Q12514 560 aaPredicted RBP2.34□□□□□ -2.03
RPB9YGL070C YPL229WQ99395 206 aa2.34□□□□□ -2.03
RPB9YGL070C CMD1P06787 147 aaKnown RBP2.33□□□□□ -2.04
RPB9YGL070C RAD10P06838 210 aa2.33□□□□□ -2.04
RPB9YGL070C ADH3P07246 375 aaKnown RBP2.33□□□□□ -2.04
RPB9YGL070C DPM1P14020 267 aaKnown RBP2.33□□□□□ -2.04
RPB9YGL070C COX10P21592 462 aa2.33□□□□□ -2.04
RPB9YGL070C MAG1P22134 296 aaKnown RBP2.33□□□□□ -2.04
RPB9YGL070C SEC14P24280 304 aaKnown RBP2.33□□□□□ -2.04
RPB9YGL070C ERG24P32462 438 aaKnown RBP2.33□□□□□ -2.04
RPB9YGL070C RPS27AP35997 82 aaKnown RBP2.33□□□□□ -2.04
RPB9YGL070C YBR063CP38083 404 aa2.33□□□□□ -2.04
RPB9YGL070C MAK5P38112 773 aaPredicted RBP2.33□□□□□ -2.04
RPB9YGL070C RPS27BP38711 82 aa2.33□□□□□ -2.04
RPB9YGL070C COS8P38723 381 aa2.33□□□□□ -2.04
RPB9YGL070C TRR2P38816 342 aa2.33□□□□□ -2.04
RPB9YGL070C GIM4P40005 111 aaKnown RBP2.33□□□□□ -2.04
RPB9YGL070C SOK1P40317 901 aa2.33□□□□□ -2.04
RPB9YGL070C LSM1P47017 172 aaKnown RBP2.33□□□□□ -2.04
RPB9YGL070C PET191Q02772 108 aa2.33□□□□□ -2.04
RPB9YGL070C TRM12Q04235 462 aa2.33□□□□□ -2.04
RPB9YGL070C GRH1Q04410 372 aaKnown RBP2.33□□□□□ -2.04
RPB9YGL070C YOL019WQ08157 551 aa2.33□□□□□ -2.04
RPB9YGL070C YOL160WQ08321 113 aa2.33□□□□□ -2.04
RPB9YGL070C NSL1Q12143 216 aa2.33□□□□□ -2.04
RPB9YGL070C RIO1Q12196 484 aaKnown RBP2.33□□□□□ -2.04
RPB9YGL070C YBL112CQ3E7Y4 105 aa2.33□□□□□ -2.04
RPB9YGL070C CDC7P06243 507 aa2.32□□□□□ -2.04
RPB9YGL070C SIR2P06700 562 aa2.32□□□□□ -2.04
RPB9YGL070C SEC22P22214 214 aa2.32□□□□□ -2.04
RPB9YGL070C YCR099CP25657 155 aa2.32□□□□□ -2.04
RPB9YGL070C ACP1P32463 125 aa2.32□□□□□ -2.04
RPB9YGL070C PTM1P32857 523 aa2.32□□□□□ -2.04
RPB9YGL070C RCN1P36054 211 aa2.32□□□□□ -2.04
RPB9YGL070C RPF1P38805 295 aaKnown RBP2.32□□□□□ -2.04
RPB9YGL070C BDH1P39714 382 aa2.32□□□□□ -2.04
RPB9YGL070C YER076CP40049 302 aa2.32□□□□□ -2.04
RPB9YGL070C YFL012WP43580 148 aa2.32□□□□□ -2.04
RPB9YGL070C YNL184CP53876 108 aa2.32□□□□□ -2.04
RPB9YGL070C COG5P53951 403 aa2.32□□□□□ -2.04
RPB9YGL070C LPP1Q04396 274 aa2.32□□□□□ -2.04
RPB9YGL070C GGA1Q06336 557 aa2.32□□□□□ -2.04
RPB9YGL070C YOR283WQ12040 230 aaKnown RBP2.32□□□□□ -2.04
RPB9YGL070C TDA8Q6B2U8 126 aa2.32□□□□□ -2.04
RPB9YGL070C YHR214C-EQ8TGK0 99 aa2.32□□□□□ -2.04
RPB9YGL070C YOL085CQ99345 113 aa2.32□□□□□ -2.04
RPB9YGL070C URA2P07259 2214 aaKnown RBP2.32□□□□□ -2.04
RPB9YGL070C DSF1P0CX08 502 aa2.31□□□□□ -2.04
RPB9YGL070C YNR073CP0CX09 502 aa2.31□□□□□ -2.04
RPB9YGL070C NSP1P14907 823 aaKnown RBP2.31□□□□□ -2.04
RPB9YGL070C CUP2P15315 225 aa2.31□□□□□ -2.04
RPB9YGL070C HSP26P15992 214 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
RPB9YGL070C GRX2P17695 143 aaKnown RBP2.31□□□□□ -2.04
RPB9YGL070C PRE7P23724 241 aaKnown RBP2.31□□□□□ -2.04
RPB9YGL070C TCA17P32613 152 aa2.31□□□□□ -2.04
RPB9YGL070C YKR041WP36134 250 aa2.31□□□□□ -2.04
RPB9YGL070C MSA2P36157 363 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms