RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W STB1P42845 420 aa3.38□□□□□ -1.87
UBP6YFR010W FMP42Q04991 504 aa3.38□□□□□ -1.87
UBP6YFR010W BSC1Q12140 328 aa3.38□□□□□ -1.87
UBP6YFR010W DGK1Q12382 290 aa3.38□□□□□ -1.87
UBP6YFR010W HUT1Q12520 339 aa3.38□□□□□ -1.87
UBP6YFR010W YGL194C-AQ2V2P6 80 aa3.38□□□□□ -1.87
UBP6YFR010W KTI11Q3E840 82 aa3.38□□□□□ -1.87
UBP6YFR010W MRS3P10566 314 aa3.37□□□□□ -1.87
UBP6YFR010W URA10P30402 227 aa3.37□□□□□ -1.87
UBP6YFR010W SPT14P32363 452 aa3.37□□□□□ -1.87
UBP6YFR010W PRM5P40476 318 aa3.37□□□□□ -1.87
UBP6YFR010W SKI6P46948 246 aaPredicted RBP3.37□□□□□ -1.87
UBP6YFR010W SBH1P52870 82 aa3.37□□□□□ -1.87
UBP6YFR010W YBL008W-AQ3E821 79 aa3.37□□□□□ -1.87
UBP6YFR010W YCR075W-AQ3E830 75 aa3.37□□□□□ -1.87
UBP6YFR010W ATP5P09457 212 aa3.36□□□□□ -1.87
UBP6YFR010W URE2P23202 354 aaKnown RBP3.36□□□□□ -1.87
UBP6YFR010W YRA2P36036 203 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
UBP6YFR010W SMP1P38128 452 aa3.36□□□□□ -1.87
UBP6YFR010W YBR090CP38253 122 aa3.36□□□□□ -1.87
UBP6YFR010W RPB11P38902 120 aa3.36□□□□□ -1.87
UBP6YFR010W AST2P39945 430 aaKnown RBP3.36□□□□□ -1.87
UBP6YFR010W SDS23P53172 527 aa3.36□□□□□ -1.87
UBP6YFR010W TDA7P53882 636 aaPredicted RBP3.36□□□□□ -1.87
UBP6YFR010W BUD25P85052 153 aa3.36□□□□□ -1.87
UBP6YFR010W GRH1Q04410 372 aaKnown RBP3.36□□□□□ -1.87
UBP6YFR010W TVP18Q04767 167 aa3.36□□□□□ -1.87
UBP6YFR010W YHC1Q05900 231 aaKnown RBP3.36□□□□□ -1.87
UBP6YFR010W IZH2Q12442 317 aa3.36□□□□□ -1.87
UBP6YFR010W YLR412C-AQ3E742 68 aa3.36□□□□□ -1.87
UBP6YFR010W TDA8Q6B2U8 126 aa3.36□□□□□ -1.87
UBP6YFR010W REP2P03872 296 aa3.35□□□□□ -1.87
UBP6YFR010W RPS8AP0CX39 200 aaKnown RBP3.35□□□□□ -1.87
UBP6YFR010W RPS8BP0CX40 200 aaKnown RBP3.35□□□□□ -1.87
UBP6YFR010W HOT13P36078 116 aa3.35□□□□□ -1.87
UBP6YFR010W AVT2P39981 480 aa3.35□□□□□ -1.87
UBP6YFR010W NSE4P43124 402 aa3.35□□□□□ -1.87
UBP6YFR010W TDA4P47153 279 aa3.35□□□□□ -1.87
UBP6YFR010W ADD37Q03233 198 aa3.35□□□□□ -1.87
UBP6YFR010W SCW10Q04951 389 aa3.35□□□□□ -1.87
UBP6YFR010W YPL278CQ08990 100 aa3.35□□□□□ -1.87
UBP6YFR010W YPL162CQ12042 273 aa3.35□□□□□ -1.87
UBP6YFR010W YLR111WQ12528 110 aa3.35□□□□□ -1.87
UBP6YFR010W MYO2P19524 1574 aaKnown RBP3.35□□□□□ -1.87
UBP6YFR010W KRE5P22023 1365 aa3.35□□□□□ -1.87
UBP6YFR010W RSF2P46974 1380 aa3.35□□□□□ -1.87
UBP6YFR010W HYP2P23301 157 aaKnown RBP3.34□□□□□ -1.87
UBP6YFR010W YCR022CP25620 114 aa3.34□□□□□ -1.87
UBP6YFR010W ECM31P38122 312 aa3.34□□□□□ -1.87
UBP6YFR010W IRC22P40006 225 aa3.34□□□□□ -1.87
UBP6YFR010W YJL213WP40896 331 aa3.34□□□□□ -1.87
UBP6YFR010W GON7P46984 123 aa3.34□□□□□ -1.87
UBP6YFR010W YGR015CP53208 328 aa3.34□□□□□ -1.87
UBP6YFR010W ELC1Q03071 99 aa3.34□□□□□ -1.87
UBP6YFR010W PIR3Q03180 325 aa3.34□□□□□ -1.87
UBP6YFR010W GAS3Q03655 524 aa3.34□□□□□ -1.87
UBP6YFR010W YDL211CQ12121 372 aa3.34□□□□□ -1.87
UBP6YFR010W YFR032C-BQ8TGU2 87 aa3.34□□□□□ -1.87
UBP6YFR010W HTL1Q9URQ5 78 aa3.34□□□□□ -1.87
UBP6YFR010W CCH1P50077 2039 aa3.34□□□□□ -1.87
UBP6YFR010W IMP1P28627 190 aa3.34□□□□□ -1.88
UBP6YFR010W LDS1P31379 325 aa3.34□□□□□ -1.88
UBP6YFR010W CSE2P33308 149 aa3.34□□□□□ -1.88
UBP6YFR010W RCN1P36054 211 aa3.34□□□□□ -1.88
UBP6YFR010W UTP30P36144 274 aaKnown RBP3.34□□□□□ -1.88
UBP6YFR010W SKG1P36169 355 aa3.34□□□□□ -1.88
UBP6YFR010W MIX23P38162 196 aa3.34□□□□□ -1.88
UBP6YFR010W SNU13P39990 126 aaKnown RBP3.34□□□□□ -1.88
UBP6YFR010W YJL218WP40892 196 aaKnown RBP3.34□□□□□ -1.88
UBP6YFR010W YNR062CP53748 327 aa3.34□□□□□ -1.88
UBP6YFR010W LPP1Q04396 274 aa3.34□□□□□ -1.88
UBP6YFR010W FSH2Q05015 223 aa3.34□□□□□ -1.88
UBP6YFR010W YLR112WQ12130 139 aa3.34□□□□□ -1.88
UBP6YFR010W HHF1P02309 103 aaKnown RBP3.33□□□□□ -1.88
UBP6YFR010W UBC5P15732 148 aa3.33□□□□□ -1.88
UBP6YFR010W AHT1P29589 182 aa3.33□□□□□ -1.88
UBP6YFR010W ERV15P38312 142 aa3.33□□□□□ -1.88
UBP6YFR010W NSG1P38837 291 aa3.33□□□□□ -1.88
UBP6YFR010W PTI1P39927 425 aaPredicted RBP3.33□□□□□ -1.88
UBP6YFR010W FIS1P40515 155 aa3.33□□□□□ -1.88
UBP6YFR010W SNO3P43544 222 aa3.33□□□□□ -1.88
UBP6YFR010W SWT21P53873 357 aaPredicted RBP3.33□□□□□ -1.88
UBP6YFR010W YPR011CQ12251 326 aa3.33□□□□□ -1.88
UBP6YFR010W SDH4P37298 181 aa3.32□□□□□ -1.88
UBP6YFR010W YHR130CP38834 111 aa3.32□□□□□ -1.88
UBP6YFR010W GTT1P40582 234 aa3.32□□□□□ -1.88
UBP6YFR010W GNA1P43577 159 aaPredicted RBP3.32□□□□□ -1.88
UBP6YFR010W WSC2P53832 503 aa3.32□□□□□ -1.88
UBP6YFR010W MCP1Q12106 302 aa3.32□□□□□ -1.88
UBP6YFR010W TY1B-PR2P0C2J0 1756 aa3.32□□□□□ -1.88
UBP6YFR010W SPT15P13393 240 aaKnown RBP3.31□□□□□ -1.88
UBP6YFR010W ERG2P32352 222 aa3.31□□□□□ -1.88
UBP6YFR010W ZRT3P34240 503 aa3.31□□□□□ -1.88
UBP6YFR010W YNL200CP40165 246 aaKnown RBP3.31□□□□□ -1.88
UBP6YFR010W YIL012WP40551 113 aa3.31□□□□□ -1.88
UBP6YFR010W YGL193CP53097 103 aa3.31□□□□□ -1.88
UBP6YFR010W GEP7P53171 287 aa3.31□□□□□ -1.88
UBP6YFR010W UPS1Q05776 175 aa3.31□□□□□ -1.88
UBP6YFR010W NIP7Q08962 181 aaKnown RBP3.31□□□□□ -1.88
UBP6YFR010W TIM22Q12328 207 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms