RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP3	YER151C	ADH1	P00330	348 aa	Known RBP	0.64	□□□□□ -2.31
UBP3	YER151C	ATP6	P00854	259 aa		0.64	□□□□□ -2.31
UBP3	YER151C	GDH2	P33327	1092 aa	Known RBP	0.64	□□□□□ -2.31
UBP3	YER151C	SDH3	P33421	198 aa		0.64	□□□□□ -2.31
UBP3	YER151C	KTI12	P34253	313 aa	Known RBP	0.64	□□□□□ -2.31
UBP3	YER151C	YKL162C	P36052	402 aa		0.64	□□□□□ -2.31
UBP3	YER151C	YHK8	P38776	514 aa		0.64	□□□□□ -2.31
UBP3	YER151C	YER189W	P40104	122 aa		0.64	□□□□□ -2.31
UBP3	YER151C	LOH1	P47055	219 aa		0.64	□□□□□ -2.31
UBP3	YER151C	NUP57	P48837	541 aa		0.64	□□□□□ -2.31
UBP3	YER151C	RPL37B	P51402	88 aa	Known RBP	0.64	□□□□□ -2.31
UBP3	YER151C	YGL034C	P53186	121 aa		0.64	□□□□□ -2.31
UBP3	YER151C	ASI3	P53983	676 aa		0.64	□□□□□ -2.31
UBP3	YER151C	RRB1	Q04225	511 aa	Known RBP	0.64	□□□□□ -2.31
UBP3	YER151C	MMT2	Q08970	484 aa		0.64	□□□□□ -2.31
UBP3	YER151C	YPR011C	Q12251	326 aa		0.64	□□□□□ -2.31
UBP3	YER151C	SNF8	Q12483	233 aa		0.64	□□□□□ -2.31
UBP3	YER151C	MHT1	Q12525	324 aa		0.64	□□□□□ -2.31
UBP3	YER151C	TIR1	P10863	254 aa		0.64	□□□□□ -2.31
UBP3	YER151C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	0.64	□□□□□ -2.31	not detected
UBP3	YER151C	RPB3	P16370	318 aa	Known RBP	0.64	□□□□□ -2.31
UBP3	YER151C	DPH5	P32469	300 aa	Predicted RBP	0.64	□□□□□ -2.31
UBP3	YER151C	TIM12	P32830	109 aa		0.64	□□□□□ -2.31
UBP3	YER151C	RIB7	P33312	244 aa		0.64	□□□□□ -2.31
UBP3	YER151C	AST2	P39945	430 aa	Known RBP	0.64	□□□□□ -2.31
UBP3	YER151C	YER121W	P40076	114 aa		0.64	□□□□□ -2.31
UBP3	YER151C	YML6	P51998	286 aa		0.64	□□□□□ -2.31
UBP3	YER151C	YGR168C	P53293	376 aa		0.64	□□□□□ -2.31
UBP3	YER151C	DSL1	P53847	754 aa		0.64	□□□□□ -2.31
UBP3	YER151C	SWT21	P53873	357 aa	Predicted RBP	0.64	□□□□□ -2.31
UBP3	YER151C	NRK1	P53915	240 aa		0.64	□□□□□ -2.31
UBP3	YER151C	TVP15	Q03860	143 aa		0.64	□□□□□ -2.31
UBP3	YER151C	RIM9	Q04734	239 aa		0.64	□□□□□ -2.31
UBP3	YER151C	YLR179C	Q06252	201 aa	Known RBP	0.64	□□□□□ -2.31
UBP3	YER151C	YMR175W-A	Q3E766	64 aa		0.64	□□□□□ -2.31
UBP3	YER151C	YGR121W-A	Q3E816	71 aa		0.64	□□□□□ -2.31
UBP3	YER151C	CYR1	P08678	2026 aa	Known RBP	0.63	□□□□□ -2.31
UBP3	YER151C	YEL009C-A	A0A023PZF2	135 aa		0.63	□□□□□ -2.31
UBP3	YER151C	CDC37	P06101	506 aa	Known RBP	0.63	□□□□□ -2.31
UBP3	YER151C	ARF1	P11076	181 aa	Known RBP	0.63	□□□□□ -2.31
UBP3	YER151C	MEK1	P24719	497 aa	Predicted RBP	0.63	□□□□□ -2.31
UBP3	YER151C	ATG22	P25568	528 aa		0.63	□□□□□ -2.31
UBP3	YER151C	PEX3	P28795	441 aa		0.63	□□□□□ -2.31
UBP3	YER151C	OM14	P38325	134 aa		0.63	□□□□□ -2.31
UBP3	YER151C	YMR134W	P40207	237 aa		0.63	□□□□□ -2.31
UBP3	YER151C	HPM1	P40481	377 aa		0.63	□□□□□ -2.31
UBP3	YER151C	IGD1	P43598	195 aa		0.63	□□□□□ -2.31
UBP3	YER151C	KEG1	P43614	200 aa		0.63	□□□□□ -2.31
UBP3	YER151C	CGR1	P53188	120 aa		0.63	□□□□□ -2.31
UBP3	YER151C	GET1	P53192	235 aa		0.63	□□□□□ -2.31
UBP3	YER151C	OSH6	Q02201	448 aa		0.63	□□□□□ -2.31
UBP3	YER151C	MRPS8	Q03799	155 aa		0.63	□□□□□ -2.31
UBP3	YER151C	YDR102C	Q03864	110 aa		0.63	□□□□□ -2.31
UBP3	YER151C	MIX14	Q04341	121 aa		0.63	□□□□□ -2.31
UBP3	YER151C	FIT1	Q04433	528 aa		0.63	□□□□□ -2.31
UBP3	YER151C	FSH2	Q05015	223 aa		0.63	□□□□□ -2.31
UBP3	YER151C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.63	□□□□□ -2.31	not detected
UBP3	YER151C	MED2	Q12124	431 aa		0.63	□□□□□ -2.31
UBP3	YER151C	COA3	Q3E7B2	85 aa		0.63	□□□□□ -2.31
UBP3	YER151C	YLR342W-A	Q3E810	57 aa		0.63	□□□□□ -2.31
UBP3	YER151C	TOR1	P35169	2470 aa		0.63	□□□□□ -2.31
UBP3	YER151C	HYP2	P23301	157 aa	Known RBP	0.63	□□□□□ -2.31
UBP3	YER151C	MRPL17	P36528	281 aa		0.63	□□□□□ -2.31
UBP3	YER151C	RPA34	P47006	233 aa	Predicted RBP	0.63	□□□□□ -2.31
UBP3	YER151C	TTI2	P47168	421 aa		0.63	□□□□□ -2.31
UBP3	YER151C	NQM1	P53228	333 aa	Predicted RBP	0.63	□□□□□ -2.31
UBP3	YER151C	RGM1	Q00453	211 aa		0.63	□□□□□ -2.31
UBP3	YER151C	NDL1	Q06568	189 aa		0.63	□□□□□ -2.31
UBP3	YER151C	MDM36	Q06820	579 aa		0.63	□□□□□ -2.31
UBP3	YER151C	PAM18	Q07914	168 aa		0.63	□□□□□ -2.31
UBP3	YER151C	PRP46	Q12417	451 aa	Predicted RBP	0.63	□□□□□ -2.31
UBP3	YER151C	YLR365W	Q7LIF2	110 aa		0.63	□□□□□ -2.31
UBP3	YER151C	RPL29	P05747	59 aa	Predicted RBP	0.62	□□□□□ -2.31
UBP3	YER151C	CDC31	P06704	161 aa	Known RBP	0.62	□□□□□ -2.31
UBP3	YER151C	CAP2	P13517	287 aa		0.62	□□□□□ -2.31
UBP3	YER151C	AHC2	P25649	128 aa		0.62	□□□□□ -2.31
UBP3	YER151C	LAS1	P36146	502 aa	Predicted RBP	0.62	□□□□□ -2.31
UBP3	YER151C	SVP26	P38869	228 aa		0.62	□□□□□ -2.31
UBP3	YER151C	IKI1	P38874	309 aa		0.62	□□□□□ -2.31
UBP3	YER151C	HAC1	P41546	238 aa		0.62	□□□□□ -2.31
UBP3	YER151C	DID2	P69771	204 aa		0.62	□□□□□ -2.31
UBP3	YER151C	ACL4	Q03771	387 aa		0.62	□□□□□ -2.31
UBP3	YER151C	BNA7	Q04066	261 aa		0.62	□□□□□ -2.31
UBP3	YER151C	YHC1	Q05900	231 aa	Known RBP	0.62	□□□□□ -2.31
UBP3	YER151C	IRC25	Q07951	179 aa		0.62	□□□□□ -2.31
UBP3	YER151C	YPL264C	Q08980	353 aa		0.62	□□□□□ -2.31
UBP3	YER151C	PSF1	Q12488	208 aa		0.62	□□□□□ -2.31
UBP3	YER151C	YKL023C-A	Q2V2P3	75 aa		0.62	□□□□□ -2.31
UBP3	YER151C	YLR462W	O13556	202 aa		0.62	□□□□□ -2.31
UBP3	YER151C	YHR212W-A	P0CX91	67 aa		0.62	□□□□□ -2.31
UBP3	YER151C	MRS4	P23500	304 aa		0.62	□□□□□ -2.31
UBP3	YER151C	YCR025C	P25352	136 aa		0.62	□□□□□ -2.31
UBP3	YER151C	VMA5	P31412	392 aa	Known RBP	0.62	□□□□□ -2.31
UBP3	YER151C	MEI5	P32489	222 aa		0.62	□□□□□ -2.31
UBP3	YER151C	TOA2	P32774	122 aa		0.62	□□□□□ -2.31
UBP3	YER151C	YHL049C	P38722	271 aa		0.62	□□□□□ -2.31
UBP3	YER151C	NVJ1	P38881	321 aa		0.62	□□□□□ -2.31
UBP3	YER151C	YEL075C	P39972	122 aa		0.62	□□□□□ -2.31
UBP3	YER151C	GCN20	P43535	752 aa	Known RBP	0.62	□□□□□ -2.31
UBP3	YER151C	YJR015W	P47090	510 aa		0.62	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 74 ms