RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W ASI3P53983 676 aa4.37□□□□□ -1.71
LCP5YER127W RCE1Q03530 315 aa4.37□□□□□ -1.71
LCP5YER127W COQ10Q08058 207 aa4.37□□□□□ -1.71
LCP5YER127W Q0297Q9ZZV8 51 aa4.37□□□□□ -1.71
LCP5YER127W HIS3P06633 220 aa4.36□□□□□ -1.71
LCP5YER127W MTW1P39731 289 aa4.36□□□□□ -1.71
LCP5YER127W YER084WP40057 128 aa4.36□□□□□ -1.71
LCP5YER127W GCN20P43535 752 aaKnown RBP4.36□□□□□ -1.71
LCP5YER127W SIP18P50263 79 aa4.36□□□□□ -1.71
LCP5YER127W PET191Q02772 108 aa4.36□□□□□ -1.71
LCP5YER127W RNH1Q04740 348 aa4.36□□□□□ -1.71
LCP5YER127W YPR127WQ06494 345 aa4.36□□□□□ -1.71
LCP5YER127W MSH5Q12175 901 aa4.36□□□□□ -1.71
LCP5YER127W MHF2Q3E829 80 aa4.36□□□□□ -1.71
LCP5YER127W BPH1P25356 2167 aa4.36□□□□□ -1.71
LCP5YER127W URA2P07259 2214 aaKnown RBP4.36□□□□□ -1.71
LCP5YER127W KRE1P17260 313 aa4.35□□□□□ -1.71
LCP5YER127W RNA15P25299 296 aaPredicted RBP4.35□□□□□ -1.71
LCP5YER127W MIG1P27705 504 aa4.35□□□□□ -1.71
LCP5YER127W YBR096WP38256 230 aa4.35□□□□□ -1.71
LCP5YER127W YJL028WP47062 111 aa4.35□□□□□ -1.71
LCP5YER127W ADO1P47143 340 aaKnown RBP4.35□□□□□ -1.71
LCP5YER127W YPR202WQ08993 238 aa4.35□□□□□ -1.71
LCP5YER127W TIM12P32830 109 aa4.34□□□□□ -1.71
LCP5YER127W YFL051CP43552 160 aa4.34□□□□□ -1.71
LCP5YER127W AGX1P43567 385 aa4.34□□□□□ -1.71
LCP5YER127W YGL235WP53071 178 aa4.34□□□□□ -1.71
LCP5YER127W MRPL50P53724 139 aa4.34□□□□□ -1.71
LCP5YER127W IGO1P53897 168 aa4.34□□□□□ -1.71
LCP5YER127W PAM18Q07914 168 aa4.34□□□□□ -1.71
LCP5YER127W FEX1Q08913 375 aa4.34□□□□□ -1.71
LCP5YER127W FEX2Q08991 375 aa4.34□□□□□ -1.71
LCP5YER127W ATG31Q12421 196 aa4.34□□□□□ -1.71
LCP5YER127W YOR343CQ12484 108 aa4.34□□□□□ -1.71
LCP5YER127W MSW1P04803 379 aa4.33□□□□□ -1.72
LCP5YER127W PET9P18239 318 aaKnown RBP4.33□□□□□ -1.72
LCP5YER127W MDH3P32419 343 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
LCP5YER127W PEX12Q04370 399 aa4.33□□□□□ -1.72
LCP5YER127W ATG17Q06410 417 aa4.33□□□□□ -1.72
LCP5YER127W CCW14O13547 238 aa4.32□□□□□ -1.72
LCP5YER127W YPK2P18961 677 aa4.32□□□□□ -1.72
LCP5YER127W DPB2P24482 689 aaPredicted RBP4.32□□□□□ -1.72
LCP5YER127W HOM6P31116 359 aaKnown RBP4.32□□□□□ -1.72
LCP5YER127W SDH4P37298 181 aa4.32□□□□□ -1.72
LCP5YER127W TEM1P38987 245 aa4.32□□□□□ -1.72
LCP5YER127W YER188WP40103 239 aa4.32□□□□□ -1.72
LCP5YER127W BAT2P47176 376 aaKnown RBP4.32□□□□□ -1.72
LCP5YER127W YGL101WP53144 215 aa4.32□□□□□ -1.72
LCP5YER127W USE1P53146 245 aa4.32□□□□□ -1.72
LCP5YER127W YNL033WP53964 284 aa4.32□□□□□ -1.72
LCP5YER127W YNL019CP53975 284 aa4.32□□□□□ -1.72
LCP5YER127W FCF1Q05498 189 aaPredicted RBP4.32□□□□□ -1.72
LCP5YER127W RNH202Q05635 350 aa4.32□□□□□ -1.72
LCP5YER127W RRS1Q08746 203 aaKnown RBP4.32□□□□□ -1.72
LCP5YER127W YBL008W-AQ3E821 79 aa4.32□□□□□ -1.72
LCP5YER127W YHR214C-EQ8TGK0 99 aa4.32□□□□□ -1.72
LCP5YER127W TDH2P00358 332 aaKnown RBP4.31□□□□□ -1.72
LCP5YER127W TOM40P23644 387 aaKnown RBP4.31□□□□□ -1.72
LCP5YER127W CLB6P32943 380 aa4.31□□□□□ -1.72
LCP5YER127W GDH2P33327 1092 aaKnown RBP4.31□□□□□ -1.72
LCP5YER127W YER121WP40076 114 aa4.31□□□□□ -1.72
LCP5YER127W HPM1P40481 377 aa4.31□□□□□ -1.72
LCP5YER127W FMC1P40491 155 aa4.31□□□□□ -1.72
LCP5YER127W PIR5P46999 287 aa4.31□□□□□ -1.72
LCP5YER127W GET1P53192 235 aa4.31□□□□□ -1.72
LCP5YER127W YNR062CP53748 327 aa4.31□□□□□ -1.72
LCP5YER127W CTF19Q02732 369 aa4.31□□□□□ -1.72
LCP5YER127W DML1Q03652 475 aa4.31□□□□□ -1.72
LCP5YER127W YPR098CQ06089 161 aa4.31□□□□□ -1.72
LCP5YER127W HRT1Q08273 121 aa4.31□□□□□ -1.72
LCP5YER127W SMT3Q12306 101 aaKnown RBP4.31□□□□□ -1.72
LCP5YER127W YKR032WP36127 104 aa4.3□□□□□ -1.72
LCP5YER127W FZO1P38297 855 aa4.3□□□□□ -1.72
LCP5YER127W TRM5P38793 499 aa4.3□□□□□ -1.72
LCP5YER127W YIR020CP40575 100 aa4.3□□□□□ -1.72
LCP5YER127W FIT3Q08907 204 aa4.3□□□□□ -1.72
LCP5YER127W ADF1Q2V2Q1 113 aa4.3□□□□□ -1.72
LCP5YER127W DPM1P14020 267 aaKnown RBP4.29□□□□□ -1.72
LCP5YER127W APA2P22108 325 aa4.29□□□□□ -1.72
LCP5YER127W IDH1P28834 360 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
LCP5YER127W TFC1P32367 649 aa4.29□□□□□ -1.72
LCP5YER127W RNP1P32385 249 aa4.29□□□□□ -1.72
LCP5YER127W TCA17P32613 152 aa4.29□□□□□ -1.72
LCP5YER127W CLG1P35190 452 aa4.29□□□□□ -1.72
LCP5YER127W RIB1P38066 345 aa4.29□□□□□ -1.72
LCP5YER127W SYF2P53277 215 aaPredicted RBP4.29□□□□□ -1.72
LCP5YER127W YNL046WP53956 172 aa4.29□□□□□ -1.72
LCP5YER127W SRL4Q03085 281 aa4.29□□□□□ -1.72
LCP5YER127W PRM15Q03262 622 aa4.29□□□□□ -1.72
LCP5YER127W DIG2Q03373 323 aaKnown RBP4.29□□□□□ -1.72
LCP5YER127W SPC24Q04477 213 aa4.29□□□□□ -1.72
LCP5YER127W GPI11Q06636 219 aa4.29□□□□□ -1.72
LCP5YER127W SNU23Q12368 194 aaPredicted RBP4.29□□□□□ -1.72
LCP5YER127W YOL162WP0CF19 215 aa4.28□□□□□ -1.72
LCP5YER127W RPS5P26783 225 aaKnown RBP4.28□□□□□ -1.72
LCP5YER127W ARC19P33204 171 aaKnown RBP4.28□□□□□ -1.72
LCP5YER127W SSH1P38353 490 aaKnown RBP4.28□□□□□ -1.72
LCP5YER127W RPS20P38701 121 aaKnown RBP4.28□□□□□ -1.72
LCP5YER127W MPM1P40364 252 aa4.28□□□□□ -1.72
LCP5YER127W BRR6P53062 197 aa4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms