RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C YMR315WQ04869 349 aaKnown RBP1.57□□□□□ -2.16
VAB2YEL005C ATG38Q05789 226 aaKnown RBP1.57□□□□□ -2.16
VAB2YEL005C DGA1Q08650 418 aa1.57□□□□□ -2.16
VAB2YEL005C SEC11P15367 167 aa1.56□□□□□ -2.16
VAB2YEL005C ATP7P30902 174 aa1.56□□□□□ -2.16
VAB2YEL005C TDA4P47153 279 aa1.56□□□□□ -2.16
VAB2YEL005C UBC12P52491 188 aa1.56□□□□□ -2.16
VAB2YEL005C ARO8P53090 500 aaKnown RBP1.56□□□□□ -2.16
VAB2YEL005C ARO80Q04052 950 aa1.56□□□□□ -2.16
VAB2YEL005C YOL024WQ08172 172 aa1.56□□□□□ -2.16
VAB2YEL005C YPR014CQ6B0W2 109 aa1.56□□□□□ -2.16
VAB2YEL005C YAR023CD6VPM8 179 aa1.55□□□□□ -2.16
VAB2YEL005C POR1P04840 283 aaKnown RBP1.55□□□□□ -2.16
VAB2YEL005C RPS24AP0CX31 135 aaKnown RBP1.55□□□□□ -2.16
VAB2YEL005C RPS24BP0CX32 135 aaKnown RBP1.55□□□□□ -2.16
VAB2YEL005C RPL2AP0CX45 254 aaKnown RBP1.55□□□□□ -2.16
VAB2YEL005C RPL2BP0CX46 254 aaKnown RBP1.55□□□□□ -2.16
VAB2YEL005C UPS2P35200 230 aa1.55□□□□□ -2.16
VAB2YEL005C MTW1P39731 289 aa1.55□□□□□ -2.16
VAB2YEL005C NOC4Q06512 552 aaPredicted RBP1.55□□□□□ -2.16
VAB2YEL005C YPR174CQ06616 221 aaPredicted RBP1.55□□□□□ -2.16
VAB2YEL005C YHR007C-AQ07074 71 aa1.55□□□□□ -2.16
VAB2YEL005C CYR1P08678 2026 aaKnown RBP1.55□□□□□ -2.16
VAB2YEL005C SPO13P23624 291 aa1.54□□□□□ -2.16
VAB2YEL005C TAH1P25638 111 aaPredicted RBP1.54□□□□□ -2.16
VAB2YEL005C FMP23P38231 175 aa1.54□□□□□ -2.16
VAB2YEL005C FMP32P43557 207 aa1.54□□□□□ -2.16
VAB2YEL005C TRX3P25372 127 aa1.53□□□□□ -2.16
VAB2YEL005C MPC3P53311 146 aa1.53□□□□□ -2.16
VAB2YEL005C NRK1P53915 240 aa1.53□□□□□ -2.16
VAB2YEL005C YML100W-AQ8TGT0 57 aa1.53□□□□□ -2.16
VAB2YEL005C SAC3P46674 1301 aa1.52□□□□□ -2.17
VAB2YEL005C APA2P22108 325 aa1.52□□□□□ -2.17
VAB2YEL005C EGD2P38879 174 aaKnown RBP1.52□□□□□ -2.17
VAB2YEL005C SEC72P39742 193 aaKnown RBP1.52□□□□□ -2.17
VAB2YEL005C YJR111CP47148 283 aaKnown RBP1.52□□□□□ -2.17
VAB2YEL005C SHH3Q04487 196 aa1.52□□□□□ -2.17
VAB2YEL005C YOL014WQ08110 124 aa1.52□□□□□ -2.17
VAB2YEL005C YLR412C-AQ3E742 68 aa1.52□□□□□ -2.17
VAB2YEL005C SEC14P24280 304 aaKnown RBP1.51□□□□□ -2.17
VAB2YEL005C MGT1P26188 188 aa1.51□□□□□ -2.17
VAB2YEL005C TRR1P29509 319 aaKnown RBP1.51□□□□□ -2.17
VAB2YEL005C NSG1P38837 291 aa1.51□□□□□ -2.17
VAB2YEL005C YPL073CP40323 161 aa1.51□□□□□ -2.17
VAB2YEL005C CUP9P41817 306 aa1.51□□□□□ -2.17
VAB2YEL005C YNL247WP53852 767 aaKnown RBP1.51□□□□□ -2.17
VAB2YEL005C PGA1P53896 198 aa1.51□□□□□ -2.17
VAB2YEL005C YMR099CQ03161 297 aaKnown RBP1.51□□□□□ -2.17
VAB2YEL005C VPS71Q03433 280 aa1.51□□□□□ -2.17
VAB2YEL005C RCE1Q03530 315 aa1.51□□□□□ -2.17
VAB2YEL005C AIM34Q03673 198 aa1.51□□□□□ -2.17
VAB2YEL005C GRX8Q05926 109 aa1.51□□□□□ -2.17
VAB2YEL005C YOR342CQ12182 319 aa1.51□□□□□ -2.17
VAB2YEL005C YNL146C-AQ3E7Z1 64 aa1.51□□□□□ -2.17
VAB2YEL005C MSB2P32334 1306 aa1.5□□□□□ -2.17
VAB2YEL005C GCY1P14065 312 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
VAB2YEL005C PHO85P17157 305 aa1.5□□□□□ -2.17
VAB2YEL005C VMA22P38784 181 aa1.5□□□□□ -2.17
VAB2YEL005C RIO2P40160 425 aaKnown RBP1.5□□□□□ -2.17
VAB2YEL005C POG1P40473 351 aa1.5□□□□□ -2.17
VAB2YEL005C GRX5Q02784 150 aa1.5□□□□□ -2.17
VAB2YEL005C SNO1Q03144 224 aa1.5□□□□□ -2.17
VAB2YEL005C HPT1Q04178 221 aaKnown RBP1.5□□□□□ -2.17
VAB2YEL005C SHH4Q06236 168 aa1.5□□□□□ -2.17
VAB2YEL005C IRC23Q08416 157 aa1.5□□□□□ -2.17
VAB2YEL005C MPD1Q12404 318 aaKnown RBP1.5□□□□□ -2.17
VAB2YEL005C MDM35O60200 86 aa1.49□□□□□ -2.17
VAB2YEL005C NSP1P14907 823 aaKnown RBP1.49□□□□□ -2.17
VAB2YEL005C AHC2P25649 128 aa1.49□□□□□ -2.17
VAB2YEL005C YER076CP40049 302 aa1.49□□□□□ -2.17
VAB2YEL005C FLX1P40464 311 aa1.49□□□□□ -2.17
VAB2YEL005C JAC1P53193 184 aa1.49□□□□□ -2.17
VAB2YEL005C MPA43P53583 542 aaPredicted RBP1.49□□□□□ -2.17
VAB2YEL005C DAD4P69851 72 aa1.49□□□□□ -2.17
VAB2YEL005C NAT3Q06504 195 aa1.49□□□□□ -2.17
VAB2YEL005C PRP11Q07350 266 aaPredicted RBP1.49□□□□□ -2.17
VAB2YEL005C EDC3P39998 551 aaKnown RBP1.48□□□□□ -2.17
VAB2YEL005C YFL019CP43576 117 aa1.48□□□□□ -2.17
VAB2YEL005C YAE1P47118 141 aaPredicted RBP1.48□□□□□ -2.17
VAB2YEL005C UBC7Q02159 165 aa1.48□□□□□ -2.17
VAB2YEL005C CWC27Q02770 301 aa1.48□□□□□ -2.17
VAB2YEL005C CHD1P32657 1468 aa1.48□□□□□ -2.17
VAB2YEL005C TIR1P10863 254 aa1.47□□□□□ -2.17
VAB2YEL005C SFK1P35735 353 aa1.47□□□□□ -2.17
VAB2YEL005C VPS51P36116 164 aa1.47□□□□□ -2.17
VAB2YEL005C NVJ1P38881 321 aa1.47□□□□□ -2.17
VAB2YEL005C SPC25P40014 221 aa1.47□□□□□ -2.17
VAB2YEL005C PLP1Q04004 230 aa1.47□□□□□ -2.17
VAB2YEL005C GPI17Q04080 534 aa1.47□□□□□ -2.17
VAB2YEL005C YMR253CQ04835 414 aa1.47□□□□□ -2.17
VAB2YEL005C IDP1P21954 428 aaKnown RBP1.46□□□□□ -2.18
VAB2YEL005C YKL102CP34249 101 aa1.46□□□□□ -2.18
VAB2YEL005C CLG1P35190 452 aa1.46□□□□□ -2.18
VAB2YEL005C PAM17P36147 197 aa1.46□□□□□ -2.18
VAB2YEL005C MAK5P38112 773 aaPredicted RBP1.46□□□□□ -2.18
VAB2YEL005C NSA2P40078 261 aaKnown RBP1.46□□□□□ -2.18
VAB2YEL005C YNL033WP53964 284 aa1.46□□□□□ -2.18
VAB2YEL005C BRX1Q08235 291 aaKnown RBP1.46□□□□□ -2.18
VAB2YEL005C YPR013CQ12145 317 aa1.46□□□□□ -2.18
VAB2YEL005C ARO7P32178 256 aa1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 52.9 ms