RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C YIL029CP40538 142 aa5.35□□□□□ -1.55
VPS61YDR136C YPS6P40583 537 aa5.35□□□□□ -1.55
VPS61YDR136C RTS2P40962 232 aa5.35□□□□□ -1.55
VPS61YDR136C RIB4P50861 169 aaPredicted RBP5.35□□□□□ -1.55
VPS61YDR136C TNA1P53322 534 aa5.35□□□□□ -1.55
VPS61YDR136C YOR292CQ08743 309 aa5.35□□□□□ -1.55
VPS61YDR136C YOR376WQ08900 122 aa5.35□□□□□ -1.55
VPS61YDR136C ERV2Q12284 196 aa5.35□□□□□ -1.55
VPS61YDR136C MPD1Q12404 318 aaKnown RBP5.35□□□□□ -1.55
VPS61YDR136C YBR255C-AQ3E776 120 aa5.35□□□□□ -1.55
VPS61YDR136C YNR034W-AQ3E841 98 aa5.35□□□□□ -1.55
VPS61YDR136C SEC16P48415 2195 aaKnown RBP5.34□□□□□ -1.55
VPS61YDR136C SNF5P18480 905 aa5.34□□□□□ -1.55
VPS61YDR136C AFR1P33304 620 aa5.34□□□□□ -1.55
VPS61YDR136C NSA2P40078 261 aaKnown RBP5.34□□□□□ -1.55
VPS61YDR136C YGR269WP40326 108 aa5.34□□□□□ -1.55
VPS61YDR136C TTI2P47168 421 aa5.34□□□□□ -1.55
VPS61YDR136C APS2Q00381 147 aa5.34□□□□□ -1.55
VPS61YDR136C ATG21Q02887 496 aa5.34□□□□□ -1.55
VPS61YDR136C SDC1Q03323 175 aa5.34□□□□□ -1.55
VPS61YDR136C DPB4Q04603 196 aaKnown RBP5.34□□□□□ -1.55
VPS61YDR136C YMR254CQ04838 102 aa5.34□□□□□ -1.55
VPS61YDR136C COQ11Q05892 277 aa5.34□□□□□ -1.55
VPS61YDR136C TMA10Q06177 86 aa5.34□□□□□ -1.55
VPS61YDR136C PRP11Q07350 266 aaPredicted RBP5.34□□□□□ -1.55
VPS61YDR136C STP4Q07351 490 aa5.34□□□□□ -1.55
VPS61YDR136C YOL118CQ08259 102 aa5.34□□□□□ -1.55
VPS61YDR136C YIL134C-AQ45U18 67 aa5.34□□□□□ -1.55
VPS61YDR136C RPL25P04456 142 aaKnown RBP5.33□□□□□ -1.56
VPS61YDR136C RPS16AP0CX51 143 aaKnown RBP5.33□□□□□ -1.56
VPS61YDR136C RPS16BP0CX52 143 aaKnown RBP5.33□□□□□ -1.56
VPS61YDR136C FUN14P18411 198 aa5.33□□□□□ -1.56
VPS61YDR136C NTC20P38302 140 aaPredicted RBP5.33□□□□□ -1.56
VPS61YDR136C IRC22P40006 225 aa5.33□□□□□ -1.56
VPS61YDR136C LOC1P43586 204 aaPredicted RBP5.33□□□□□ -1.56
VPS61YDR136C YGR149WP48236 432 aa5.33□□□□□ -1.56
VPS61YDR136C OST3P48439 350 aa5.33□□□□□ -1.56
VPS61YDR136C GEP7P53171 287 aa5.33□□□□□ -1.56
VPS61YDR136C MIX14Q04341 121 aa5.33□□□□□ -1.56
VPS61YDR136C MHR1Q06630 226 aa5.33□□□□□ -1.56
VPS61YDR136C LAS17Q12446 633 aa5.33□□□□□ -1.56
VPS61YDR136C YOR192C-CQ3E736 78 aa5.33□□□□□ -1.56
VPS61YDR136C ATG40Q99325 256 aa5.33□□□□□ -1.56
VPS61YDR136C ERG8P24521 451 aa5.32□□□□□ -1.56
VPS61YDR136C IMP1P28627 190 aa5.32□□□□□ -1.56
VPS61YDR136C ACP1P32463 125 aa5.32□□□□□ -1.56
VPS61YDR136C YBL059WP34224 193 aa5.32□□□□□ -1.56
VPS61YDR136C UBS1P38290 277 aa5.32□□□□□ -1.56
VPS61YDR136C YER079WP40052 210 aaKnown RBP5.32□□□□□ -1.56
VPS61YDR136C YGR050CP53231 118 aa5.32□□□□□ -1.56
VPS61YDR136C LST7P53237 242 aa5.32□□□□□ -1.56
VPS61YDR136C HCH1P53834 153 aa5.32□□□□□ -1.56
VPS61YDR136C MRP51Q02950 344 aa5.32□□□□□ -1.56
VPS61YDR136C ATC1Q04005 294 aa5.32□□□□□ -1.56
VPS61YDR136C UPS1Q05776 175 aa5.32□□□□□ -1.56
VPS61YDR136C FRQ1Q06389 190 aa5.32□□□□□ -1.56
VPS61YDR136C PIN3Q06449 215 aa5.32□□□□□ -1.56
VPS61YDR136C SWT1Q12104 458 aa5.32□□□□□ -1.56
VPS61YDR136C NCE102Q12207 173 aaRIP-Chip data5.32□□□□□ -1.56not detected
VPS61YDR136C BOL1Q3E793 110 aa5.32□□□□□ -1.56
VPS61YDR136C YOR032W-AQ8TGS1 66 aa5.32□□□□□ -1.56
VPS61YDR136C ILV5P06168 395 aaKnown RBP5.31□□□□□ -1.56
VPS61YDR136C RPS22AP0C0W1 130 aaKnown RBP5.31□□□□□ -1.56
VPS61YDR136C COQ3P27680 312 aa5.31□□□□□ -1.56
VPS61YDR136C YKL107WP34251 309 aa5.31□□□□□ -1.56
VPS61YDR136C MCH2P36032 473 aa5.31□□□□□ -1.56
VPS61YDR136C MIA40P36046 403 aa5.31□□□□□ -1.56
VPS61YDR136C MRPL11P36521 249 aaPredicted RBP5.31□□□□□ -1.56
VPS61YDR136C PIG2P40187 538 aa5.31□□□□□ -1.56
VPS61YDR136C YIL169CP40442 995 aa5.31□□□□□ -1.56
VPS61YDR136C GPI2P46961 280 aa5.31□□□□□ -1.56
VPS61YDR136C YVH1Q02256 364 aaKnown RBP5.31□□□□□ -1.56
VPS61YDR136C YMR007WQ03675 126 aa5.31□□□□□ -1.56
VPS61YDR136C YDR391CQ04170 232 aa5.31□□□□□ -1.56
VPS61YDR136C RIM9Q04734 239 aa5.31□□□□□ -1.56
VPS61YDR136C YPR098CQ06089 161 aa5.31□□□□□ -1.56
VPS61YDR136C HRD1Q08109 551 aa5.31□□□□□ -1.56
VPS61YDR136C AKR2Q12013 749 aa5.31□□□□□ -1.56
VPS61YDR136C ATX2Q12067 313 aa5.31□□□□□ -1.56
VPS61YDR136C YPR071WQ12346 211 aa5.31□□□□□ -1.56
VPS61YDR136C ERG27Q12452 347 aaKnown RBP5.31□□□□□ -1.56
VPS61YDR136C CYC7P00045 113 aa5.3□□□□□ -1.56
VPS61YDR136C YPT1P01123 206 aaKnown RBP5.3□□□□□ -1.56
VPS61YDR136C FCY2P17064 533 aa5.3□□□□□ -1.56
VPS61YDR136C YKL075CP36083 450 aa5.3□□□□□ -1.56
VPS61YDR136C QDR3P38227 689 aa5.3□□□□□ -1.56
VPS61YDR136C RTC3P38804 111 aaPredicted RBP5.3□□□□□ -1.56
VPS61YDR136C PCL7P40186 285 aa5.3□□□□□ -1.56
VPS61YDR136C OST1P41543 476 aaKnown RBP5.3□□□□□ -1.56
VPS61YDR136C HIT1P46973 164 aa5.3□□□□□ -1.56
VPS61YDR136C MRPL19P53875 158 aa5.3□□□□□ -1.56
VPS61YDR136C DAD3P69850 94 aa5.3□□□□□ -1.56
VPS61YDR136C USV1Q12132 391 aa5.3□□□□□ -1.56
VPS61YDR136C FYV7Q12247 151 aa5.3□□□□□ -1.56
VPS61YDR136C RPL7AP05737 244 aaKnown RBP5.29□□□□□ -1.56
VPS61YDR136C ATP5P09457 212 aa5.29□□□□□ -1.56
VPS61YDR136C URA5P13298 226 aaKnown RBP5.29□□□□□ -1.56
VPS61YDR136C CPR5P35176 225 aa5.29□□□□□ -1.56
VPS61YDR136C UTH1P36135 365 aa5.29□□□□□ -1.56
VPS61YDR136C YMR262WP38430 313 aa5.29□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms