RNA–Protein interactions for RNA: YDR087C

RRP1, Transcript of Essential evolutionarily conserved nucleolar protein, yeastyeast

Gene RRP1, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP1YDR087C TUS1Q06412 1307 aa2.93□□□□□ -1.94
RRP1YDR087C IDH1P28834 360 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
RRP1YDR087C YRB2P40517 327 aa2.92□□□□□ -1.94
RRP1YDR087C DOC1P53068 250 aa2.92□□□□□ -1.94
RRP1YDR087C BOL2P53082 120 aa2.92□□□□□ -1.94
RRP1YDR087C SWP1Q02795 286 aa2.92□□□□□ -1.94
RRP1YDR087C FIG2P25653 1609 aa2.91□□□□□ -1.94
RRP1YDR087C RPL27BP0C2H7 136 aaKnown RBP2.91□□□□□ -1.94
RRP1YDR087C MRPL28P36527 147 aa2.91□□□□□ -1.94
RRP1YDR087C DSE2P38844 325 aa2.91□□□□□ -1.94
RRP1YDR087C AGE2P40529 298 aa2.91□□□□□ -1.94
RRP1YDR087C MDH2P22133 377 aa2.9□□□□□ -1.95
RRP1YDR087C RFA3P26755 122 aaKnown RBP2.9□□□□□ -1.95
RRP1YDR087C SPS18P32572 300 aa2.9□□□□□ -1.95
RRP1YDR087C MRPL17P36528 281 aa2.9□□□□□ -1.95
RRP1YDR087C IKI1P38874 309 aa2.9□□□□□ -1.95
RRP1YDR087C TIR3P40552 269 aa2.9□□□□□ -1.95
RRP1YDR087C YHR214C-EQ8TGK0 99 aa2.9□□□□□ -1.95
RRP1YDR087C YDR034W-BQ6Q5X2 51 aa2.89□□□□□ -1.95
RRP1YDR087C YCL012CQ8J0M4 134 aa2.89□□□□□ -1.95
RRP1YDR087C TIM9O74700 87 aa2.88□□□□□ -1.95
RRP1YDR087C MGM101P32787 269 aaKnown RBP2.88□□□□□ -1.95
RRP1YDR087C YCR087C-AP37263 153 aa2.88□□□□□ -1.95
RRP1YDR087C YFR054CP43622 192 aa2.88□□□□□ -1.95
RRP1YDR087C YNG1Q08465 219 aa2.88□□□□□ -1.95
RRP1YDR087C JIP3O13555 125 aa2.87□□□□□ -1.95
RRP1YDR087C YDR249CQ03787 373 aa2.87□□□□□ -1.95
RRP1YDR087C SML1Q04964 104 aa2.87□□□□□ -1.95
RRP1YDR087C YPL162CQ12042 273 aa2.87□□□□□ -1.95
RRP1YDR087C ADF1Q2V2Q1 113 aa2.87□□□□□ -1.95
RRP1YDR087C ADE6P38972 1358 aaKnown RBP2.87□□□□□ -1.95
RRP1YDR087C YLR419WQ06698 1435 aaKnown RBP2.86□□□□□ -1.95
RRP1YDR087C GSC2P40989 1895 aa2.86□□□□□ -1.95
RRP1YDR087C MRPS28P21771 286 aa2.86□□□□□ -1.95
RRP1YDR087C PTM1P32857 523 aa2.86□□□□□ -1.95
RRP1YDR087C UMP1P38293 148 aa2.86□□□□□ -1.95
RRP1YDR087C AVT2P39981 480 aa2.86□□□□□ -1.95
RRP1YDR087C YNR077CP53758 84 aa2.86□□□□□ -1.95
RRP1YDR087C CUS2P53830 285 aaPredicted RBP2.86□□□□□ -1.95
RRP1YDR087C LSM7P53905 115 aaKnown RBP2.86□□□□□ -1.95
RRP1YDR087C CWC21Q03375 135 aaKnown RBP2.86□□□□□ -1.95
RRP1YDR087C TSC3Q3E790 80 aa2.86□□□□□ -1.95
RRP1YDR087C PMD1P32634 1753 aa2.85□□□□□ -1.95
RRP1YDR087C MER1P16523 270 aa2.85□□□□□ -1.95
RRP1YDR087C YER135CP40082 130 aa2.85□□□□□ -1.95
RRP1YDR087C YFR032C-BQ8TGU2 87 aa2.85□□□□□ -1.95
RRP1YDR087C PDR18P53756 1333 aa2.85□□□□□ -1.95
RRP1YDR087C RPO41P13433 1351 aaKnown RBP2.85□□□□□ -1.95
RRP1YDR087C HTB1P02293 131 aaKnown RBP2.84□□□□□ -1.95
RRP1YDR087C HTB2P02294 131 aa2.84□□□□□ -1.95
RRP1YDR087C RMD6P39975 231 aa2.84□□□□□ -1.95
RRP1YDR087C YNL217WP40152 326 aa2.84□□□□□ -1.95
RRP1YDR087C COG5P53951 403 aa2.84□□□□□ -1.95
RRP1YDR087C GCN1P33892 2672 aaKnown RBP2.84□□□□□ -1.96
RRP1YDR087C KSS1P14681 368 aa2.83□□□□□ -1.96
RRP1YDR087C FZF1P32805 299 aa2.83□□□□□ -1.96
RRP1YDR087C SKG1P36169 355 aa2.83□□□□□ -1.96
RRP1YDR087C GVP36P40531 326 aaKnown RBP2.83□□□□□ -1.96
RRP1YDR087C GGA1Q06336 557 aa2.83□□□□□ -1.96
RRP1YDR087C YRA1Q12159 226 aaKnown RBP2.83□□□□□ -1.96
RRP1YDR087C AST2P39945 430 aaKnown RBP2.82□□□□□ -1.96
RRP1YDR087C VTC1P40046 129 aaRIP-Chip data2.82□□□□□ -1.96not detected
RRP1YDR087C RFC4P40339 323 aaKnown RBP2.82□□□□□ -1.96
RRP1YDR087C BUD25P85052 153 aa2.82□□□□□ -1.96
RRP1YDR087C YOL160WQ08321 113 aa2.82□□□□□ -1.96
RRP1YDR087C RPS24AP0CX31 135 aaKnown RBP2.81□□□□□ -1.96
RRP1YDR087C RPS24BP0CX32 135 aaKnown RBP2.81□□□□□ -1.96
RRP1YDR087C RPB3P16370 318 aaKnown RBP2.81□□□□□ -1.96
RRP1YDR087C CBF1P17106 351 aa2.81□□□□□ -1.96
RRP1YDR087C YET1P35723 206 aa2.81□□□□□ -1.96
RRP1YDR087C YMR226CQ05016 267 aaKnown RBP2.81□□□□□ -1.96
RRP1YDR087C FSF1Q12029 327 aaKnown RBP2.81□□□□□ -1.96
RRP1YDR087C MATALPHA2P0CY08 210 aa2.8□□□□□ -1.96
RRP1YDR087C HMLALPHA2P0CY09 210 aa2.8□□□□□ -1.96
RRP1YDR087C ATP15P21306 62 aa2.8□□□□□ -1.96
RRP1YDR087C BET1P22804 142 aa2.8□□□□□ -1.96
RRP1YDR087C YBR219CP38317 127 aa2.8□□□□□ -1.96
RRP1YDR087C GPM2Q12008 311 aa2.8□□□□□ -1.96
RRP1YDR087C SEN1Q00416 2231 aaKnown RBP2.8□□□□□ -1.96
RRP1YDR087C IRA2P19158 3079 aa2.79□□□□□ -1.96
RRP1YDR087C URA5P13298 226 aaKnown RBP2.79□□□□□ -1.96
RRP1YDR087C MAG1P22134 296 aaKnown RBP2.79□□□□□ -1.96
RRP1YDR087C SNC2P33328 115 aa2.79□□□□□ -1.96
RRP1YDR087C TRM5P38793 499 aa2.79□□□□□ -1.96
RRP1YDR087C NOP19P53317 196 aaPredicted RBP2.79□□□□□ -1.96
RRP1YDR087C MRPS17Q03246 237 aaPredicted RBP2.79□□□□□ -1.96
RRP1YDR087C ABP140Q08641 628 aaKnown RBP2.79□□□□□ -1.96
RRP1YDR087C FMP27Q06179 2628 aa2.78□□□□□ -1.96
RRP1YDR087C RPL25P04456 142 aaKnown RBP2.78□□□□□ -1.96
RRP1YDR087C GAA1P39012 614 aa2.78□□□□□ -1.96
RRP1YDR087C YLR162WQ06235 118 aa2.78□□□□□ -1.96
RRP1YDR087C GET4Q12125 312 aa2.78□□□□□ -1.96
RRP1YDR087C IRA1P18963 3092 aa2.77□□□□□ -1.97
RRP1YDR087C QCR7P00128 127 aa2.77□□□□□ -1.97
RRP1YDR087C ERG10P41338 398 aaKnown RBP2.77□□□□□ -1.97
RRP1YDR087C FLO9P39712 1322 aa2.76□□□□□ -1.97
RRP1YDR087C GLE2P40066 365 aa2.76□□□□□ -1.97
RRP1YDR087C AIM25P47140 327 aa2.76□□□□□ -1.97
RRP1YDR087C CSI2Q08054 341 aa2.76□□□□□ -1.97
RRP1YDR087C MDM32Q12171 622 aa2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 70 ms