RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN6	YDL097C	MRPL3	P36516	390 aa		3.12	□□□□□ -1.91
RPN6	YDL097C	FRM2	P37261	193 aa		3.12	□□□□□ -1.91
RPN6	YDL097C	GPX2	P38143	162 aa		3.12	□□□□□ -1.91
RPN6	YDL097C	YBR137W	P38276	179 aa		3.12	□□□□□ -1.91
RPN6	YDL097C	YNL200C	P40165	246 aa	Known RBP	3.12	□□□□□ -1.91
RPN6	YDL097C	YKE4	P40544	346 aa		3.12	□□□□□ -1.91
RPN6	YDL097C	YJL218W	P40892	196 aa	Known RBP	3.12	□□□□□ -1.91
RPN6	YDL097C	IRC18	P47056	224 aa		3.12	□□□□□ -1.91
RPN6	YDL097C	YGL101W	P53144	215 aa		3.12	□□□□□ -1.91
RPN6	YDL097C	ALG13	P53178	202 aa		3.12	□□□□□ -1.91
RPN6	YDL097C	CAX4	P53223	239 aa		3.12	□□□□□ -1.91
RPN6	YDL097C	GPI1	P53306	609 aa		3.12	□□□□□ -1.91
RPN6	YDL097C	YNL095C	P53932	642 aa		3.12	□□□□□ -1.91
RPN6	YDL097C	ASR1	Q06834	288 aa		3.12	□□□□□ -1.91
RPN6	YDL097C	ATP14	Q12349	124 aa		3.12	□□□□□ -1.91
RPN6	YDL097C	MPD1	Q12404	318 aa	Known RBP	3.12	□□□□□ -1.91
RPN6	YDL097C	CMC2	Q3E7A4	109 aa		3.12	□□□□□ -1.91
RPN6	YDL097C	RPL25	P04456	142 aa	Known RBP	3.11	□□□□□ -1.91
RPN6	YDL097C	PET54	P10834	293 aa		3.11	□□□□□ -1.91
RPN6	YDL097C	VAM7	P32912	316 aa		3.11	□□□□□ -1.91
RPN6	YDL097C	SPC34	P36131	295 aa		3.11	□□□□□ -1.91
RPN6	YDL097C	MRPL4	P36517	319 aa		3.11	□□□□□ -1.91
RPN6	YDL097C	PRS2	P38620	318 aa	Known RBP	3.11	□□□□□ -1.91
RPN6	YDL097C	YHK8	P38776	514 aa		3.11	□□□□□ -1.91
RPN6	YDL097C	IPI1	P38803	334 aa	Predicted RBP	3.11	□□□□□ -1.91
RPN6	YDL097C	IPT1	P38954	527 aa		3.11	□□□□□ -1.91
RPN6	YDL097C	SAS2	P40963	338 aa		3.11	□□□□□ -1.91
RPN6	YDL097C	YJR011C	P47086	261 aa	Predicted RBP	3.11	□□□□□ -1.91
RPN6	YDL097C	TPN1	P53099	579 aa		3.11	□□□□□ -1.91
RPN6	YDL097C	FMP48	P53233	369 aa		3.11	□□□□□ -1.91
RPN6	YDL097C	NRK1	P53915	240 aa		3.11	□□□□□ -1.91
RPN6	YDL097C	NEJ1	Q06148	342 aa		3.11	□□□□□ -1.91
RPN6	YDL097C	DGK1	Q12382	290 aa		3.11	□□□□□ -1.91
RPN6	YDL097C	TFB5	Q3E7C1	72 aa	Predicted RBP	3.11	□□□□□ -1.91
RPN6	YDL097C	RPL42A	P0CX27	106 aa	Known RBP	3.1	□□□□□ -1.91
RPN6	YDL097C	RPL42B	P0CX28	106 aa	Known RBP	3.1	□□□□□ -1.91
RPN6	YDL097C	DPM1	P14020	267 aa	Known RBP	3.1	□□□□□ -1.91
RPN6	YDL097C	RTC2	P38279	296 aa		3.1	□□□□□ -1.91
RPN6	YDL097C	MBA1	P38300	278 aa		3.1	□□□□□ -1.91
RPN6	YDL097C	SER2	P42941	309 aa		3.1	□□□□□ -1.91
RPN6	YDL097C	RPL9B	P51401	191 aa	Known RBP	3.1	□□□□□ -1.91
RPN6	YDL097C	YIF1	P53845	314 aa	Known RBP	3.1	□□□□□ -1.91
RPN6	YDL097C	MRX8	Q05473	314 aa		3.1	□□□□□ -1.91
RPN6	YDL097C	UPS1	Q05776	175 aa		3.1	□□□□□ -1.91
RPN6	YDL097C	YLR283W	Q05867	314 aa		3.1	□□□□□ -1.91
RPN6	YDL097C	YFH1	Q07540	174 aa		3.1	□□□□□ -1.91
RPN6	YDL097C	ATX2	Q12067	313 aa		3.1	□□□□□ -1.91
RPN6	YDL097C	DCN1	Q12395	269 aa		3.1	□□□□□ -1.91
RPN6	YDL097C	YPL119C-A	Q3E751	87 aa		3.1	□□□□□ -1.91
RPN6	YDL097C	QDR3	P38227	689 aa		3.09	□□□□□ -1.91
RPN6	YDL097C	POP7	P38291	140 aa		3.09	□□□□□ -1.91
RPN6	YDL097C	ERV15	P38312	142 aa		3.09	□□□□□ -1.91
RPN6	YDL097C	RTC3	P38804	111 aa	Predicted RBP	3.09	□□□□□ -1.91
RPN6	YDL097C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	RIP-Chip
RPN6	YDL097C	YND1	P40009	630 aa		3.09	□□□□□ -1.91
RPN6	YDL097C	ERG25	P53045	309 aa		3.09	□□□□□ -1.91
RPN6	YDL097C	POP6	P53218	158 aa		3.09	□□□□□ -1.91
RPN6	YDL097C	YNL033W	P53964	284 aa		3.09	□□□□□ -1.91
RPN6	YDL097C	YNL019C	P53975	284 aa		3.09	□□□□□ -1.91
RPN6	YDL097C	ERV25	P54837	211 aa	Known RBP	3.09	□□□□□ -1.91
RPN6	YDL097C	RRG8	Q06109	277 aa		3.09	□□□□□ -1.91
RPN6	YDL097C	HEM25	Q07534	307 aa		3.09	□□□□□ -1.91
RPN6	YDL097C	YPD1	Q07688	167 aa		3.09	□□□□□ -1.91
RPN6	YDL097C	YDL199C	Q12407	687 aa		3.09	□□□□□ -1.91
RPN6	YDL097C	THP2	O13539	261 aa	Known RBP	3.08	□□□□□ -1.92
RPN6	YDL097C	MRPL6	P32904	214 aa		3.08	□□□□□ -1.92
RPN6	YDL097C	RPS20	P38701	121 aa	Known RBP	3.08	□□□□□ -1.92
RPN6	YDL097C	PCL6	P40038	420 aa		3.08	□□□□□ -1.92
RPN6	YDL097C	YNL194C	P40169	301 aa		3.08	□□□□□ -1.92
RPN6	YDL097C	YGL159W	P53110	370 aa		3.08	□□□□□ -1.92
RPN6	YDL097C	YGR168C	P53293	376 aa		3.08	□□□□□ -1.92
RPN6	YDL097C	AAH1	P53909	347 aa		3.08	□□□□□ -1.92
RPN6	YDL097C	HSK3	P69852	69 aa		3.08	□□□□□ -1.92
RPN6	YDL097C	YMR244W	Q04018	355 aa		3.08	□□□□□ -1.92
RPN6	YDL097C	ORT1	Q12375	292 aa		3.08	□□□□□ -1.92
RPN6	YDL097C	YNL162W-A	Q3E7A8	72 aa		3.08	□□□□□ -1.92
RPN6	YDL097C	CDC28	P00546	298 aa	Known RBP	3.07	□□□□□ -1.92
RPN6	YDL097C	COS8	P38723	381 aa		3.07	□□□□□ -1.92
RPN6	YDL097C	MDM31	P38880	579 aa		3.07	□□□□□ -1.92
RPN6	YDL097C	SSO2	P39926	295 aa		3.07	□□□□□ -1.92
RPN6	YDL097C	RFC2	P40348	353 aa		3.07	□□□□□ -1.92
RPN6	YDL097C	MRX5	P47007	382 aa		3.07	□□□□□ -1.92
RPN6	YDL097C	YCL001W-A	P87012	153 aa		3.07	□□□□□ -1.92
RPN6	YDL097C	SPR6	Q01684	191 aa		3.07	□□□□□ -1.92
RPN6	YDL097C	ARL3	Q02804	198 aa		3.07	□□□□□ -1.92
RPN6	YDL097C	YOR283W	Q12040	230 aa	Known RBP	3.07	□□□□□ -1.92
RPN6	YDL097C	YGK3	Q12222	375 aa	Predicted RBP	3.07	□□□□□ -1.92
RPN6	YDL097C	CDC23	P16522	626 aa		3.06	□□□□□ -1.92
RPN6	YDL097C	PHO80	P20052	293 aa		3.06	□□□□□ -1.92
RPN6	YDL097C	RPL24B	P24000	155 aa	Known RBP	3.06	□□□□□ -1.92
RPN6	YDL097C	CDC50	P25656	391 aa		3.06	□□□□□ -1.92
RPN6	YDL097C	UBC8	P28263	218 aa		3.06	□□□□□ -1.92
RPN6	YDL097C	VMA5	P31412	392 aa	Known RBP	3.06	□□□□□ -1.92
RPN6	YDL097C	AVT5	P38176	459 aa		3.06	□□□□□ -1.92
RPN6	YDL097C	GEP4	P38812	185 aa		3.06	□□□□□ -1.92
RPN6	YDL097C	IKI1	P38874	309 aa		3.06	□□□□□ -1.92
RPN6	YDL097C	SWM2	P40342	146 aa		3.06	□□□□□ -1.92
RPN6	YDL097C	CIN5	P40917	295 aa		3.06	□□□□□ -1.92
RPN6	YDL097C	COX16	P47081	118 aa		3.06	□□□□□ -1.92
RPN6	YDL097C	PHB2	P50085	310 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms