RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 IL18RAPO95256 599 aa18.99■□□□□ 0.63
PHGDH-226ENST00000641756 ARF4P18085 180 aaPredicted RBP18.99■□□□□ 0.63
PHGDH-226ENST00000641756 PLTPP55058 493 aa18.99■□□□□ 0.63
PHGDH-226ENST00000641756 GRB14Q14449 540 aa18.99■□□□□ 0.63
PHGDH-226ENST00000641756 FAM187BQ17R55 369 aa18.99■□□□□ 0.63
PHGDH-226ENST00000641756 CD302Q8IX05 232 aa18.99■□□□□ 0.63
PHGDH-226ENST00000641756 C1orf127Q8N9H9 656 aa18.99■□□□□ 0.63
PHGDH-226ENST00000641756 PLVAPQ9BX97 442 aa18.99■□□□□ 0.63
PHGDH-226ENST00000641756 ZDHHC18Q9NUE0 388 aa18.99■□□□□ 0.63
PHGDH-226ENST00000641756 SCINQ9Y6U3 715 aa18.99■□□□□ 0.63
PHGDH-226ENST00000641756 FSCN2O14926 492 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 MMP3P08254 477 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 MMP8P22894 467 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 TMOD1P28289 359 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 SSR1P43307 286 aaKnown RBP18.98■□□□□ 0.63
PHGDH-226ENST00000641756 RPL21P46778 160 aaKnown RBP18.98■□□□□ 0.63
PHGDH-226ENST00000641756 CDH8P55286 799 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 RPL7AP62424 266 aaKnown RBP18.98■□□□□ 0.63
PHGDH-226ENST00000641756 ORC1Q13415 861 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 OR6J1Q8NGC5 347 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 NPLOC4Q8TAT6 608 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 FEZF2Q8TBJ5 459 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 PPP1R13LQ8WUF5 828 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 PARVAQ9NVD7 372 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.98■□□□□ 0.63
PHGDH-226ENST00000641756 ADCY6O43306 1168 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 CELF2O95319 508 aaKnown RBP18.98■□□□□ 0.63
PHGDH-226ENST00000641756 ITGB3P05106 788 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 MCF2P10911 925 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 POU5F1BQ06416 359 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 SNX1Q13596 522 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 GRIK4Q16099 956 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 WDR72Q3MJ13 1102 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 SGO2Q562F6 1265 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 SPRYD7Q5W111 196 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 ZDHHC24Q6UX98 284 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 PLEKHH3Q7Z736 793 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 CCDC50Q8IVM0 306 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 PARK7Q99497 189 aaKnown RBP18.98■□□□□ 0.63
PHGDH-226ENST00000641756 TINF2Q9BSI4 451 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 ATP8A1Q9Y2Q0 1164 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 COL1A2P08123 1366 aa18.98■□□□□ 0.63
PHGDH-226ENST00000641756 H0YGN5 161 aa18.97■□□□□ 0.63
PHGDH-226ENST00000641756 ZEB2O60315 1214 aa18.97■□□□□ 0.63
PHGDH-226ENST00000641756 FGFR4P22455 802 aa18.97■□□□□ 0.63
PHGDH-226ENST00000641756 ACTN2P35609 894 aa18.97■□□□□ 0.63
PHGDH-226ENST00000641756 TNFAIP2Q03169 654 aa18.97■□□□□ 0.63
PHGDH-226ENST00000641756 ACVR2BQ13705 512 aa18.97■□□□□ 0.63
PHGDH-226ENST00000641756 DUSP28Q4G0W2 176 aa18.97■□□□□ 0.63
PHGDH-226ENST00000641756 ZNF667Q5HYK9 610 aa18.97■□□□□ 0.63
PHGDH-226ENST00000641756 MARCH8Q5T0T0 291 aa18.97■□□□□ 0.63
PHGDH-226ENST00000641756 IFNLR1Q8IU57 520 aaPredicted RBP18.97■□□□□ 0.63
PHGDH-226ENST00000641756 WDTC1Q8N5D0 677 aa18.97■□□□□ 0.63
PHGDH-226ENST00000641756 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.97■□□□□ 0.63
PHGDH-226ENST00000641756 FBXO25Q8TCJ0 367 aa18.97■□□□□ 0.63
PHGDH-226ENST00000641756 ATG4AQ8WYN0 398 aa18.97■□□□□ 0.63
PHGDH-226ENST00000641756 CHST7Q9NS84 486 aa18.97■□□□□ 0.63
PHGDH-226ENST00000641756 GRHL1Q9NZI5 618 aa18.97■□□□□ 0.63
PHGDH-226ENST00000641756 NFS1Q9Y697 457 aa18.97■□□□□ 0.63
PHGDH-226ENST00000641756 PODXLO00592 558 aa18.97■□□□□ 0.63
PHGDH-226ENST00000641756 CD19P15391 556 aa18.97■□□□□ 0.63
PHGDH-226ENST00000641756 LACTBP83111 547 aaPredicted RBP18.97■□□□□ 0.63
PHGDH-226ENST00000641756 PPP1R2P3Q6NXS1 205 aa18.97■□□□□ 0.63
PHGDH-226ENST00000641756 RHOT1Q8IXI2 618 aa18.97■□□□□ 0.63
PHGDH-226ENST00000641756 C2orf69Q8N8R5 385 aa18.97■□□□□ 0.63
PHGDH-226ENST00000641756 C12orf50Q8NA57 414 aaPredicted RBP18.97■□□□□ 0.63
PHGDH-226ENST00000641756 TMEM35BQ8NCS4 154 aa18.97■□□□□ 0.63
PHGDH-226ENST00000641756 HEMGNQ9BXL5 484 aa18.97■□□□□ 0.63
PHGDH-226ENST00000641756 SDCBP2Q9H190 292 aa18.97■□□□□ 0.63
PHGDH-226ENST00000641756 LSM8O95777 96 aaKnown RBP18.96■□□□□ 0.63
PHGDH-226ENST00000641756 CALB1P05937 261 aa18.96■□□□□ 0.63
PHGDH-226ENST00000641756 FNTAP49354 379 aa18.96■□□□□ 0.63
PHGDH-226ENST00000641756 DRG2P55039 364 aaKnown RBP18.96■□□□□ 0.63
PHGDH-226ENST00000641756 MTMR3Q13615 1198 aa18.96■□□□□ 0.63
PHGDH-226ENST00000641756 FAM110CQ1W6H9 321 aa18.96■□□□□ 0.63
PHGDH-226ENST00000641756 SLC10A6Q3KNW5 377 aa18.96■□□□□ 0.63
PHGDH-226ENST00000641756 CYP4A22Q5TCH4 519 aa18.96■□□□□ 0.63
PHGDH-226ENST00000641756 DENND1BQ6P3S1 775 aa18.96■□□□□ 0.63
PHGDH-226ENST00000641756 LRIG3Q6UXM1 1119 aa18.96■□□□□ 0.63
PHGDH-226ENST00000641756 LEKR1Q6ZMV7 388 aa18.96■□□□□ 0.63
PHGDH-226ENST00000641756 MCEEQ96PE7 176 aa18.96■□□□□ 0.63
PHGDH-226ENST00000641756 CENPHQ9H3R5 247 aa18.96■□□□□ 0.63
PHGDH-226ENST00000641756 LRRC19Q9H756 370 aa18.96■□□□□ 0.63
PHGDH-226ENST00000641756 SMYD3Q9H7B4 428 aa18.96■□□□□ 0.63
PHGDH-226ENST00000641756 KLHL11Q9NVR0 708 aa18.96■□□□□ 0.63
PHGDH-226ENST00000641756 PSTPIP1O43586 416 aa18.95■□□□□ 0.62
PHGDH-226ENST00000641756 TSPAN1O60635 241 aa18.95■□□□□ 0.62
PHGDH-226ENST00000641756 RALAP11233 206 aa18.95■□□□□ 0.62
PHGDH-226ENST00000641756 TCF4P15884 667 aa18.95■□□□□ 0.62
PHGDH-226ENST00000641756 FKBP1BP68106 108 aa18.95■□□□□ 0.62
PHGDH-226ENST00000641756 ZNF844Q08AG5 666 aa18.95■□□□□ 0.62
PHGDH-226ENST00000641756 TMEM62Q0P6H9 643 aa18.95■□□□□ 0.62
PHGDH-226ENST00000641756 PRAMEF19Q5SWL8 479 aa18.95■□□□□ 0.62
PHGDH-226ENST00000641756 DNAJC24Q6P3W2 148 aa18.95■□□□□ 0.62
PHGDH-226ENST00000641756 KIAA0319LQ8IZA0 1049 aa18.95■□□□□ 0.62
PHGDH-226ENST00000641756 ABHD16BQ9H3Z7 469 aa18.95■□□□□ 0.62
PHGDH-226ENST00000641756 SETD4Q9NVD3 440 aa18.95■□□□□ 0.62
PHGDH-226ENST00000641756 PPFIA2O75334 1257 aa18.95■□□□□ 0.62
PHGDH-226ENST00000641756 ERLIN2O94905 339 aa18.95■□□□□ 0.62
PHGDH-226ENST00000641756 ECEL1O95672 775 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms