RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 ASPAP45381 313 aa18.12■□□□□ 0.49
PHGDH-211ENST00000641213 RPL7AP62424 266 aaKnown RBP18.12■□□□□ 0.49
PHGDH-211ENST00000641213 SLC29A2Q14542 456 aa18.12■□□□□ 0.49
PHGDH-211ENST00000641213 PTGISQ16647 500 aa18.12■□□□□ 0.49
PHGDH-211ENST00000641213 ZNF699Q32M78 642 aa18.12■□□□□ 0.49
PHGDH-211ENST00000641213 ODF2Q5BJF6 829 aa18.12■□□□□ 0.49
PHGDH-211ENST00000641213 ARMCX2Q7L311 632 aa18.12■□□□□ 0.49
PHGDH-211ENST00000641213 HEMGNQ9BXL5 484 aa18.12■□□□□ 0.49
PHGDH-211ENST00000641213 EPN3Q9H201 632 aa18.12■□□□□ 0.49
PHGDH-211ENST00000641213 ERAP1Q9NZ08 941 aa18.12■□□□□ 0.49
PHGDH-211ENST00000641213 WHRNQ9P202 907 aa18.12■□□□□ 0.49
PHGDH-211ENST00000641213 IP6K2Q9UHH9 426 aa18.12■□□□□ 0.49
PHGDH-211ENST00000641213 SLC12A6Q9UHW9 1150 aa18.12■□□□□ 0.49
PHGDH-211ENST00000641213 R3HDM2Q9Y2K5 976 aaKnown RBP18.12■□□□□ 0.49
PHGDH-211ENST00000641213 KAT6AQ92794 2004 aa18.12■□□□□ 0.49
PHGDH-211ENST00000641213 TMEM191CA6NGB0 347 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 TULP2O00295 520 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 TNNC2P02585 160 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 CALB1P05937 261 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 CYP2C8P10632 490 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 EPHX2P34913 555 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 MAGOHP61326 146 aaKnown RBP18.11■□□□□ 0.49
PHGDH-211ENST00000641213 PPP2R2AP63151 447 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 CALCOCO2Q13137 446 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 SLMAPQ14BN4 828 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 TMEM132AQ24JP5 1023 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 UBAP2Q5T6F2 1119 aaKnown RBP18.11■□□□□ 0.49
PHGDH-211ENST00000641213 SCARA5Q6ZMJ2 495 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 ARMC9Q7Z3E5 817 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 TMEM192Q8IY95 271 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 TLCD1Q96CP7 247 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 ANKRD36BP1Q96IX9 119 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 CDT1Q9H211 546 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 TNFSF13BQ9Y275 285 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 TCRBV5S1A1TA0A578 114 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 CAND2O75155 1236 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 RARGP13631 454 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 ARHGAP1Q07960 439 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 PTK6Q13882 451 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 SYDE1Q6ZW31 735 aaPredicted RBP18.11■□□□□ 0.49
PHGDH-211ENST00000641213 HOOK3Q86VS8 718 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 TMEM35BQ8NCS4 154 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 EXD1Q8NHP7 514 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 GRK7Q8WTQ7 553 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 TFAP2BQ92481 460 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 L3MBTL3Q96JM7 780 aaPredicted RBP18.11■□□□□ 0.49
PHGDH-211ENST00000641213 CITO14578 2027 aa18.11■□□□□ 0.49
PHGDH-211ENST00000641213 CXCL8P10145 99 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 YBX3P16989 372 aaKnown RBP eCLIP18.1■□□□□ 0.492e-7■□□□□ 9.8
PHGDH-211ENST00000641213 FGFR4P22455 802 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 IVDP26440 423 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 GJC1P36383 396 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 SSR1P43307 286 aaKnown RBP18.1■□□□□ 0.49
PHGDH-211ENST00000641213 IGBP1P78318 339 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 SNAPC2Q13487 334 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 GJC2Q5T442 439 aaPredicted RBP18.1■□□□□ 0.49
PHGDH-211ENST00000641213 ANKS1BQ7Z6G8 1248 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 WDTC1Q8N5D0 677 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 NFKBIZQ9BYH8 718 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 OSBPL8Q9BZF1 889 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 ZNF518BQ9C0D4 1074 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 IFT122Q9HBG6 1241 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 ASIC3Q9UHC3 531 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 PCDHGC3Q9UN70 934 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 TRIP11Q15643 1979 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 NDUFAB1O14561 156 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 INSRRP14616 1297 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 ITIH2P19823 946 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 CDH5P33151 784 aaPredicted RBP18.1■□□□□ 0.49
PHGDH-211ENST00000641213 ZNF252P-AS1Q0IIN9 211 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 ZNF484Q5JVG2 852 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 LDLRAD1Q5T700 205 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 DPY19L2Q6NUT2 758 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 ATL2Q8NHH9 583 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 SNF8Q96H20 258 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 RPF1Q9H9Y2 349 aaKnown RBP18.1■□□□□ 0.49
PHGDH-211ENST00000641213 HOMER3Q9NSC5 361 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 FEZ2Q9UHY8 353 aaPredicted RBP18.1■□□□□ 0.49
PHGDH-211ENST00000641213 POLIQ9UNA4 740 aa18.1■□□□□ 0.49
PHGDH-211ENST00000641213 SRRM3A6NNA2 597 aaPredicted RBP18.09■□□□□ 0.49
PHGDH-211ENST00000641213 GPR25O00155 361 aa18.09■□□□□ 0.49
PHGDH-211ENST00000641213 EBAG9O00559 213 aa18.09■□□□□ 0.49
PHGDH-211ENST00000641213 RIPK2O43353 540 aa18.09■□□□□ 0.49
PHGDH-211ENST00000641213 IL18RAPO95256 599 aa18.09■□□□□ 0.49
PHGDH-211ENST00000641213 GAS8O95995 478 aa18.09■□□□□ 0.49
PHGDH-211ENST00000641213 LGALS2P05162 132 aa18.09■□□□□ 0.49
PHGDH-211ENST00000641213 EIF4BP23588 611 aaKnown RBP18.09■□□□□ 0.49
PHGDH-211ENST00000641213 CCNG2Q16589 344 aa18.09■□□□□ 0.49
PHGDH-211ENST00000641213 ATP13A4Q4VNC1 1196 aa18.09■□□□□ 0.49
PHGDH-211ENST00000641213 TAPT1Q6NXT6 567 aa18.09■□□□□ 0.49
PHGDH-211ENST00000641213 RHBDF2Q6PJF5 856 aa18.09■□□□□ 0.49
PHGDH-211ENST00000641213 PGM2Q96G03 612 aa18.09■□□□□ 0.49
PHGDH-211ENST00000641213 PRMT7Q9NVM4 692 aaPredicted RBP18.09■□□□□ 0.49
PHGDH-211ENST00000641213 MYO1CO00159 1063 aa18.08■□□□□ 0.49
PHGDH-211ENST00000641213 TCF4P15884 667 aa18.08■□□□□ 0.49
PHGDH-211ENST00000641213 TMOD1P28289 359 aa18.08■□□□□ 0.49
PHGDH-211ENST00000641213 PHKA2P46019 1235 aa18.08■□□□□ 0.49
PHGDH-211ENST00000641213 SEC24CP53992 1094 aa18.08■□□□□ 0.49
PHGDH-211ENST00000641213 PPARDQ03181 441 aa18.08■□□□□ 0.49
PHGDH-211ENST00000641213 LAMC2Q13753 1193 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms