RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 RAP1GDS1P52306 607 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 KCND2Q9NZV8 630 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 HSPA1AP0DMV8 641 aaKnown RBP19.35■□□□□ 0.69
SCARB2-213ENST00000638680 HSPA1BP0DMV9 641 aaKnown RBP19.35■□□□□ 0.69
SCARB2-213ENST00000638680 KYAT1Q16773 422 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 MROH9Q5TGP6 573 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 FAM71DQ8N9W8 422 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 TNIP3Q96KP6 325 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 PCDHGB4Q9UN71 923 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 MAGEA13PA6NCF6 341 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 MYO1GB0I1T2 1018 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 KRT8P05787 483 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 ATP6V1B1P15313 513 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 SPRP35270 261 aaPredicted RBP19.35■□□□□ 0.69
SCARB2-213ENST00000638680 SLC13A5Q86YT5 568 aaPredicted RBP19.35■□□□□ 0.69
SCARB2-213ENST00000638680 PCYOX1LQ8NBM8 494 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 KDM4CQ9H3R0 1056 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 PCDHB2Q9Y5E7 798 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 HECW2Q9P2P5 1572 aa19.34■□□□□ 0.69
SCARB2-213ENST00000638680 DGAT1O75907 488 aa19.34■□□□□ 0.69
SCARB2-213ENST00000638680 SGSM1Q2NKQ1 1148 aa19.34■□□□□ 0.69
SCARB2-213ENST00000638680 PATL1Q86TB9 770 aaKnown RBP19.34■□□□□ 0.69
SCARB2-213ENST00000638680 L1RE1Q9UN81 338 aa19.34■□□□□ 0.69
SCARB2-213ENST00000638680 UBE3AQ05086 875 aa19.34■□□□□ 0.69
SCARB2-213ENST00000638680 MAPK7Q13164 816 aa19.34■□□□□ 0.69
SCARB2-213ENST00000638680 UGP2Q16851 508 aa19.34■□□□□ 0.69
SCARB2-213ENST00000638680 SCFD1Q8WVM8 642 aa19.34■□□□□ 0.69
SCARB2-213ENST00000638680 IL1RL2Q9HB29 575 aa19.34■□□□□ 0.69
SCARB2-213ENST00000638680 TMEM8AQ9HCN3 771 aa19.34■□□□□ 0.69
SCARB2-213ENST00000638680 CAPN6Q9Y6Q1 641 aa19.34■□□□□ 0.69
SCARB2-213ENST00000638680 CROCC2H7BZ55 1655 aa19.34■□□□□ 0.69
SCARB2-213ENST00000638680 WDR47O94967 919 aa19.34■□□□□ 0.69
SCARB2-213ENST00000638680 RPS6P62753 249 aaKnown RBP19.34■□□□□ 0.69
SCARB2-213ENST00000638680 TTC30BQ8N4P2 665 aa19.34■□□□□ 0.69
SCARB2-213ENST00000638680 TSPAN17Q96FV3 270 aa19.34■□□□□ 0.69
SCARB2-213ENST00000638680 RPAP3Q9H6T3 665 aaPredicted RBP19.34■□□□□ 0.69
SCARB2-213ENST00000638680 PXDNLA1KZ92 1463 aa19.34■□□□□ 0.69
SCARB2-213ENST00000638680 HLA-DRAP01903 254 aa19.34■□□□□ 0.69
SCARB2-213ENST00000638680 S100A5P33763 92 aa19.34■□□□□ 0.69
SCARB2-213ENST00000638680 FXR2P51116 673 aaKnown RBP eCLIP19.34■□□□□ 0.69
SCARB2-213ENST00000638680 ARID3BQ8IVW6 561 aaPredicted RBP19.34■□□□□ 0.69
SCARB2-213ENST00000638680 INPP5DQ92835 1189 aa19.34■□□□□ 0.69
SCARB2-213ENST00000638680 ZSWIM1Q9BR11 485 aa19.34■□□□□ 0.69
SCARB2-213ENST00000638680 PI4K2AQ9BTU6 479 aa19.34■□□□□ 0.69
SCARB2-213ENST00000638680 TRIM45Q9H8W5 580 aaPredicted RBP19.34■□□□□ 0.69
SCARB2-213ENST00000638680 ATP6V1E1P36543 226 aa19.33■□□□□ 0.69
SCARB2-213ENST00000638680 HERVK_113P62684 666 aa19.33■□□□□ 0.69
SCARB2-213ENST00000638680 MRPL28Q13084 256 aaKnown RBP19.33■□□□□ 0.69
SCARB2-213ENST00000638680 PTK2BQ14289 1009 aa19.33■□□□□ 0.69
SCARB2-213ENST00000638680 KIZQ2M2Z5 673 aa19.33■□□□□ 0.69
SCARB2-213ENST00000638680 PDP2Q9P2J9 529 aa19.33■□□□□ 0.69
SCARB2-213ENST00000638680 PSMD3O43242 534 aa19.33■□□□□ 0.69
SCARB2-213ENST00000638680 STAT5BP51692 787 aa19.33■□□□□ 0.69
SCARB2-213ENST00000638680 SPDYAQ5MJ70 313 aa19.33■□□□□ 0.69
SCARB2-213ENST00000638680 LAYNQ6UX15 382 aa19.33■□□□□ 0.69
SCARB2-213ENST00000638680 BLOC1S6Q9UL45 172 aa19.33■□□□□ 0.69
SCARB2-213ENST00000638680 PLAGL2Q9UPG8 496 aa19.33■□□□□ 0.69
SCARB2-213ENST00000638680 SNX9Q9Y5X1 595 aa19.33■□□□□ 0.69
SCARB2-213ENST00000638680 CDY2AQ9Y6F7 541 aa19.33■□□□□ 0.69
SCARB2-213ENST00000638680 CDY1Q9Y6F8 540 aa19.33■□□□□ 0.69
SCARB2-213ENST00000638680 FNTAP49354 379 aa19.33■□□□□ 0.68
SCARB2-213ENST00000638680 COPAP53621 1224 aa19.33■□□□□ 0.68
SCARB2-213ENST00000638680 TRIM60Q495X7 471 aa19.33■□□□□ 0.68
SCARB2-213ENST00000638680 CDR2LQ86X02 465 aaPredicted RBP19.33■□□□□ 0.68
SCARB2-213ENST00000638680 TEKT4Q8WW24 435 aa19.33■□□□□ 0.68
SCARB2-213ENST00000638680 ACSF2Q96CM8 615 aaPredicted RBP19.33■□□□□ 0.68
SCARB2-213ENST00000638680 FAM111AQ96PZ2 611 aa19.33■□□□□ 0.68
SCARB2-213ENST00000638680 MMP19Q99542 508 aa19.33■□□□□ 0.68
SCARB2-213ENST00000638680 SHCBP1LQ9BZQ2 653 aa19.33■□□□□ 0.68
SCARB2-213ENST00000638680 NCOA3Q9Y6Q9 1424 aa19.33■□□□□ 0.68
SCARB2-213ENST00000638680 EEF2KO00418 725 aaKnown RBP19.33■□□□□ 0.68
SCARB2-213ENST00000638680 PTPAQ15257 358 aa19.33■□□□□ 0.68
SCARB2-213ENST00000638680 OTULINQ96BN8 352 aa19.33■□□□□ 0.68
SCARB2-213ENST00000638680 MAGEB18Q96M61 343 aa19.33■□□□□ 0.68
SCARB2-213ENST00000638680 CARD9Q9H257 536 aa19.33■□□□□ 0.68
SCARB2-213ENST00000638680 RSAD1Q9HA92 442 aa19.33■□□□□ 0.68
SCARB2-213ENST00000638680 HEY2Q9UBP5 337 aa19.33■□□□□ 0.68
SCARB2-213ENST00000638680 PRPF4O43172 522 aaKnown RBP eCLIP19.33■□□□□ 0.68
SCARB2-213ENST00000638680 AP5Z1O43299 807 aa19.33■□□□□ 0.68
SCARB2-213ENST00000638680 POLBP06746 335 aa19.33■□□□□ 0.68
SCARB2-213ENST00000638680 TRIM28Q13263 835 aaKnown RBP19.33■□□□□ 0.68
SCARB2-213ENST00000638680 PRUNE1Q86TP1 453 aa19.33■□□□□ 0.68
SCARB2-213ENST00000638680 B4GALNT2Q8NHY0 566 aa19.33■□□□□ 0.68
SCARB2-213ENST00000638680 ZNF512BQ96KM6 892 aaPredicted RBP19.33■□□□□ 0.68
SCARB2-213ENST00000638680 SMAPO00193 183 aa19.32■□□□□ 0.68
SCARB2-213ENST00000638680 PLA2G4FQ68DD2 849 aa19.32■□□□□ 0.68
SCARB2-213ENST00000638680 RRM2BQ7LG56 351 aa19.32■□□□□ 0.68
SCARB2-213ENST00000638680 FEZF2Q8TBJ5 459 aa19.32■□□□□ 0.68
SCARB2-213ENST00000638680 MAP3K14Q99558 947 aa19.32■□□□□ 0.68
SCARB2-213ENST00000638680 FAM129AQ9BZQ8 928 aa19.32■□□□□ 0.68
SCARB2-213ENST00000638680 SFMBT1Q9UHJ3 866 aa19.32■□□□□ 0.68
SCARB2-213ENST00000638680 A0A087X0T9 212 aa19.32■□□□□ 0.68
SCARB2-213ENST00000638680 TRIM49D1C9J1S8 452 aa19.32■□□□□ 0.68
SCARB2-213ENST00000638680 FAM228BP0C875 321 aa19.32■□□□□ 0.68
SCARB2-213ENST00000638680 PAPD7Q5XG87 772 aaKnown RBP19.32■□□□□ 0.68
SCARB2-213ENST00000638680 SPATA31A3Q5VYP0 1347 aa19.32■□□□□ 0.68
SCARB2-213ENST00000638680 CDH2P19022 906 aaPredicted RBP19.32■□□□□ 0.68
SCARB2-213ENST00000638680 EZH2Q15910 746 aaKnown RBP19.32■□□□□ 0.68
SCARB2-213ENST00000638680 ATPAF2Q8N5M1 289 aa19.32■□□□□ 0.68
SCARB2-213ENST00000638680 ARHGEF1Q92888 912 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms