RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 YWHAHQ04917 246 aaPredicted RBP10.48□□□□□ -0.73
LINC00339-210ENST00000635675 BFSP1Q12934 665 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 MYO1EQ12965 1108 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 CLUL1Q15846 466 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 PUS10Q3MIT2 529 aaKnown RBP10.48□□□□□ -0.73
LINC00339-210ENST00000635675 ZACNQ401N2 412 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 CTXN3Q4LDR2 81 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 TDRD10Q5VZ19 366 aaKnown RBP10.48□□□□□ -0.73
LINC00339-210ENST00000635675 POTEHQ6S545 545 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 C15orf39Q6ZRI6 1047 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 RBM43Q6ZSC3 357 aaKnown RBP10.48□□□□□ -0.73
LINC00339-210ENST00000635675 SPATA31D4Q6ZUB0 917 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 LIMS2Q7Z4I7 341 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 USP37Q86T82 979 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 MLKLQ8NB16 471 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 SMRP1Q8NCR6 262 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 ZNF461Q8TAF7 563 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 MED15Q96RN5 788 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 OXCT2Q9BYC2 517 aaPredicted RBP10.48□□□□□ -0.73
LINC00339-210ENST00000635675 PLEKHA4Q9H4M7 779 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 DZANK1Q9NVP4 752 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 DSEQ9UL01 958 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 BICDL2A1A5D9 508 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 GRXCR2A6NFK2 248 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 SLC16A3O15427 465 aaKnown RBP10.47□□□□□ -0.73
LINC00339-210ENST00000635675 MBTPS2O43462 519 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 PAPLNO95428 1278 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 VNN1O95497 513 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 STAU1O95793 577 aaKnown RBP10.47□□□□□ -0.73
LINC00339-210ENST00000635675 EPB41P11171 864 aaKnown RBP10.47□□□□□ -0.73
LINC00339-210ENST00000635675 KRT13P13646 458 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 MYL6P60660 151 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 ROR1Q01973 937 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 PPP3CAQ08209 521 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 PAK1Q13153 545 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 SMAD4Q13485 552 aaKnown RBP10.47□□□□□ -0.73
LINC00339-210ENST00000635675 WSCD1Q658N2 575 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 OVOS1Q6IE37 1185 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 PTCRAQ6ISU1 281 aaPredicted RBP10.47□□□□□ -0.73
LINC00339-210ENST00000635675 ZNF280DQ6N043 979 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 SV2AQ7L0J3 742 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 FILIP1Q7Z7B0 1213 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 PDCL2Q8N4E4 241 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 C12orf76Q8N812 135 aaPredicted RBP10.47□□□□□ -0.73
LINC00339-210ENST00000635675 KREMEN2Q8NCW0 462 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 CEP63Q96MT8 703 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 RTP3Q9BQQ7 232 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 XYLT2Q9H1B5 865 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 ADAM7Q9H2U9 754 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 MAN1C1Q9NR34 630 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 DPP7Q9UHL4 492 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 RWDD2AQ9UIY3 292 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 FBXW11Q9UKB1 542 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 CTNND2Q9UQB3 1225 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 R3HCC1Q9Y3T6 440 aaKnown RBP10.47□□□□□ -0.73
LINC00339-210ENST00000635675 SNX9Q9Y5X1 595 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 XIRP2A4UGR9 3374 aa10.47□□□□□ -0.73
LINC00339-210ENST00000635675 WDR27A2RRH5 827 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 OR6C75A6NL08 312 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 HUS1O60921 280 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 PHACTR2O75167 634 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 TRIM49P0CI25 452 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 TRIM49CP0CI26 452 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 ATICP31939 592 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 GTF2H1P32780 548 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 GCLMP48507 274 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 STX17P56962 302 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 NLRP12P59046 1061 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 ITIH3Q06033 890 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 BIRC3Q13489 604 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 TRPC3Q13507 836 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 NCOA4Q13772 614 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 SOWAHAQ2M3V2 549 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 DPCR1Q3MIW9 517 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 TJAP1Q5JTD0 557 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 TPGS2Q68CL5 300 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 DPH6Q7L8W6 267 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 TOP6BLQ8N6T0 577 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 CMASQ8NFW8 434 aaPredicted RBP10.46□□□□□ -0.74
LINC00339-210ENST00000635675 SUSD6Q92537 303 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 VRTNQ9H8Y1 702 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 L1RE1Q9UN81 338 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 USP15Q9Y4E8 981 aaPredicted RBP10.46□□□□□ -0.74
LINC00339-210ENST00000635675 TSC2P49815 1807 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 UNC80Q8N2C7 3258 aa10.46□□□□□ -0.74
LINC00339-210ENST00000635675 GABRDO14764 452 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 RFPL2O75678 378 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 ZMYND10O75800 440 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 FAM163BP0C2L3 166 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 ATF2P15336 505 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 ARPP19P56211 112 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 GPR17Q13304 367 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 SMAD2Q15796 467 aaKnown RBP10.45□□□□□ -0.74
LINC00339-210ENST00000635675 UVSSAQ2YD98 709 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 WDR72Q3MJ13 1102 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 RARS2Q5T160 578 aaKnown RBP10.45□□□□□ -0.74
LINC00339-210ENST00000635675 ELMSAN1Q6PJG2 1045 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 RTL10Q7L3V2 364 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 FRMD5Q7Z6J6 570 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 GPR149Q86SP6 731 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms