RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 SEMA4CQ9C0C4 833 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 GSTO2Q9H4Y5 243 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 SPTLC3Q9NUV7 552 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 INTS13Q9NVM9 706 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 TUBA8Q9NY65 449 aaPredicted RBP1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 MOCS1Q9NZB8 636 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 MDFICQ9P1T7 246 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 SLC23A1Q9UHI7 598 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 AJAP1Q9UKB5 411 aaPredicted RBP1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 CDYLQ9Y232 598 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 PCDHB1Q9Y5F3 818 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 ACTL7AQ9Y615 435 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 KDM6BO15054 1643 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 ZCCHC11Q5TAX3 1644 aaKnown RBP1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 TOPBP1Q92547 1522 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 FANCD2Q9BXW9 1451 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 SMIM35A0A1B0GVV1 85 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 GOLGA8AA7E2F4 631 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 VWC2LB2RUY7 222 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 TISP43B9A030 160 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 KIAA0391O15091 583 aaKnown RBP1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 PROM1O43490 865 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 PHF2O75151 1096 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 FKBP9O95302 570 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 LATS1O95835 1130 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 F2P00734 622 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 RHOP08100 348 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 NHLRC4P0CG21 123 aaPredicted RBP1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 KRT10P13645 584 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 IL2RBP14784 551 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 PPP3CBP16298 524 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 SCP2P22307 547 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 LSP1P33241 339 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 SOX5P35711 763 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 CCT8P50990 548 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 DSG1Q02413 1049 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 SP140Q13342 867 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 PTPRRQ15256 657 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 CLUL1Q15846 466 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 SEPT7Q16181 437 aaKnown RBP1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 CT83Q5H943 113 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 PRAMEF17Q5VTA0 474 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 FRMD7Q6ZUT3 714 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 FKBP9P1Q75LS8 142 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 CLNKQ7Z7G1 428 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 FITM2Q8N6M3 262 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 Q8NA96 180 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 B3GALNT2Q8NCR0 500 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 FBXO41Q8TF61 875 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 NSMCE1Q8WV22 266 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 EAF2Q96CJ1 260 aaPredicted RBP1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 MED15Q96RN5 788 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 TLR10Q9BXR5 811 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 PRSS22Q9GZN4 317 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 IFT22Q9H7X7 185 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 CAAP1Q9H8G2 361 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 BCO1Q9HAY6 547 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 DMRT3Q9NQL9 472 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 LANCL2Q9NS86 450 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 TRNAU1APQ9NX07 287 aaKnown RBP1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 DPP7Q9UHL4 492 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 TBX22Q9Y458 520 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 AFG3L2Q9Y4W6 797 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 CUX1P39880 1505 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 SNAPC4Q5SXM2 1469 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 MYO5BQ9ULV0 1848 aa1.5□□□□□ -2.17
SMARCB1-209ENST00000635578 KAT6AQ92794 2004 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 ZNF142P52746 1687 aaPredicted RBP1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 MADDQ8WXG6 1647 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 PRAMEF33A0A0G2JMD5 474 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 A0A1W2PS29 197 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 TOR1BO14657 336 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 PRAMEF10O60809 474 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 ULK1O75385 1050 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 TUBB4AP04350 444 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 ALAS1P13196 640 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 IBSPP21815 317 aaPredicted RBP1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 PCSK1P29120 753 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 ADCYAP1R1P41586 468 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 ID4P47928 161 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 MASP1P48740 699 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 HNRNPMP52272 730 aaKnown RBP eCLIP1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 SCAND1P57086 179 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 RPS7P62081 194 aaKnown RBP1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 MC2RQ01718 297 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 HYAL1Q12794 435 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 LAMB3Q13751 1172 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 FAM50AQ14320 339 aaKnown RBP1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 TERF2Q15554 542 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 PROSER3Q2NL68 480 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 Q4G0T1 1027 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 BROXQ5VW32 411 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 ATG9BQ674R7 924 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 Q6ZTC4 211 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 IRF2BP2Q7Z5L9 587 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 STRA8Q7Z7C7 330 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 KIAA0907Q7Z7F0 614 aaPredicted RBP1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 KIF18BQ86Y91 864 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 ADGRG5Q8IZF4 528 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 RBMXL3Q8N7X1 1067 aaKnown RBP1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms