RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 TMEM130Q8N3G9 435 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 MYCT1Q8N699 235 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 APPL2Q8NEU8 664 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 DDX12PQ92771 950 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 DNASE1L2Q92874 299 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 IRF7Q92985 503 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 SUSD3Q96L08 255 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 ASB16Q96NS5 453 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 TNMDQ9H2S6 317 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 MAGEF1Q9HAY2 307 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 ZNF334Q9HCZ1 680 aaPredicted RBP16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 DLL3Q9NYJ7 618 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 CEP72Q9P209 647 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 CNTN3Q9P232 1028 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 SMG5Q9UPR3 1016 aaKnown RBP16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 ZNF292O60281 2723 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 OTOGLQ3ZCN5 2332 aa16.89■□□□□ 0.29
SNRNP48-203ENST00000634363 MYMKA6NI61 221 aa16.89■□□□□ 0.29
SNRNP48-203ENST00000634363 SHISA7A6NL88 538 aa16.89■□□□□ 0.29
SNRNP48-203ENST00000634363 K7ENM7 598 aa16.89■□□□□ 0.29
SNRNP48-203ENST00000634363 MAN2B1O00754 1011 aa16.89■□□□□ 0.29
SNRNP48-203ENST00000634363 PSMC3P17980 439 aa16.89■□□□□ 0.29
SNRNP48-203ENST00000634363 PROZP22891 400 aa16.89■□□□□ 0.29
SNRNP48-203ENST00000634363 ZNF131P52739 623 aa16.89■□□□□ 0.29
SNRNP48-203ENST00000634363 SLC10A6Q3KNW5 377 aa16.89■□□□□ 0.29
SNRNP48-203ENST00000634363 VITQ6UXI7 678 aa16.89■□□□□ 0.29
SNRNP48-203ENST00000634363 GPIHBP1Q8IV16 184 aa16.89■□□□□ 0.29
SNRNP48-203ENST00000634363 CEP57L1Q8IYX8 460 aa16.89■□□□□ 0.29
SNRNP48-203ENST00000634363 GPR161Q8N6U8 529 aaKnown RBP16.89■□□□□ 0.29
SNRNP48-203ENST00000634363 FAM3CQ92520 227 aa16.89■□□□□ 0.29
SNRNP48-203ENST00000634363 SMARCD2Q92925 531 aa16.89■□□□□ 0.29
SNRNP48-203ENST00000634363 SLITRK6Q9H5Y7 841 aa16.89■□□□□ 0.29
SNRNP48-203ENST00000634363 LMAN1LQ9HAT1 526 aa16.89■□□□□ 0.29
SNRNP48-203ENST00000634363 AFF4Q9UHB7 1163 aaKnown RBP16.89■□□□□ 0.29
SNRNP48-203ENST00000634363 USP18Q9UMW8 372 aa16.89■□□□□ 0.29
SNRNP48-203ENST00000634363 TIMM13Q9Y5L4 95 aaPredicted RBP16.89■□□□□ 0.29
SNRNP48-203ENST00000634363 TCHHQ07283 1943 aa16.88■□□□□ 0.29
SNRNP48-203ENST00000634363 GOLGA6L4A6NEF3 574 aa16.88■□□□□ 0.29
SNRNP48-203ENST00000634363 ABLIM1O14639 778 aa16.88■□□□□ 0.29
SNRNP48-203ENST00000634363 ZNF263O14978 683 aa16.88■□□□□ 0.29
SNRNP48-203ENST00000634363 MEFVO15553 781 aaPredicted RBP16.88■□□□□ 0.29
SNRNP48-203ENST00000634363 TRAK2O60296 914 aa16.88■□□□□ 0.29
SNRNP48-203ENST00000634363 MICAL2O94851 1124 aa16.88■□□□□ 0.29
SNRNP48-203ENST00000634363 IDEP14735 1019 aa16.88■□□□□ 0.29
SNRNP48-203ENST00000634363 PFKFB1P16118 471 aa16.88■□□□□ 0.29
SNRNP48-203ENST00000634363 SCP2P22307 547 aa16.88■□□□□ 0.29
SNRNP48-203ENST00000634363 TEAD2Q15562 447 aa16.88■□□□□ 0.29
SNRNP48-203ENST00000634363 LPAL2Q16609 132 aa16.88■□□□□ 0.29
SNRNP48-203ENST00000634363 TMEM161BQ8NDZ6 487 aa16.88■□□□□ 0.29
SNRNP48-203ENST00000634363 ZSCAN18Q8TBC5 510 aaPredicted RBP16.88■□□□□ 0.29
SNRNP48-203ENST00000634363 PGLYRP2Q96PD5 576 aa16.88■□□□□ 0.29
SNRNP48-203ENST00000634363 NTPCRQ9BSD7 190 aaKnown RBP16.88■□□□□ 0.29
SNRNP48-203ENST00000634363 ASAH2Q9NR71 780 aa16.88■□□□□ 0.29
SNRNP48-203ENST00000634363 TUBGCP4Q9UGJ1 667 aa16.88■□□□□ 0.29
SNRNP48-203ENST00000634363 PDCD11Q14690 1871 aaKnown RBP16.88■□□□□ 0.29
SNRNP48-203ENST00000634363 A0A1B0GVL5 298 aa16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 A0A1W2PQ27 194 aa16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 A0A1W2PQ64 194 aa16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 A0A1W2PQD8 194 aa16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 CLDN3O15551 220 aa16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 LILRB5O75023 590 aa16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 TOM1L1O75674 476 aa16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 OR4Q2P0C623 313 aa16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 GAP43P17677 238 aa16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 CCNE1P24864 410 aa16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 ABCD1P33897 745 aa16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 NCKAP1LP55160 1127 aa16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 YWHAHQ04917 246 aaPredicted RBP16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 PPP2R5DQ14738 602 aa16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 NOLC1Q14978 699 aaKnown RBP eCLIP16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 MAP4K3Q8IVH8 894 aa16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 PIAS4Q8N2W9 510 aaPredicted RBP16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 FSIP1Q8NA03 581 aa16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 NELL1Q92832 810 aa16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 BICD1Q96G01 975 aa16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 EPC1Q9H2F5 836 aa16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 PRMT8Q9NR22 394 aaPredicted RBP16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 KBTBD4Q9NVX7 518 aa16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 SEL1LQ9UBV2 794 aa16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 RAB23Q9ULC3 237 aa16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 PCDHB8Q9UN66 801 aa16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 PIAS3Q9Y6X2 628 aa16.87■□□□□ 0.29
SNRNP48-203ENST00000634363 HEPACAM2A8MVW5 462 aa16.86■□□□□ 0.29
SNRNP48-203ENST00000634363 MOSPD3O75425 235 aa16.86■□□□□ 0.29
SNRNP48-203ENST00000634363 CXCL8P10145 99 aa16.86■□□□□ 0.29
SNRNP48-203ENST00000634363 MAPTP10636 758 aaKnown RBP16.86■□□□□ 0.29
SNRNP48-203ENST00000634363 SDHBP21912 280 aa16.86■□□□□ 0.29
SNRNP48-203ENST00000634363 SYKP43405 635 aa16.86■□□□□ 0.29
SNRNP48-203ENST00000634363 ATXN1P54253 815 aaKnown RBP16.86■□□□□ 0.29
SNRNP48-203ENST00000634363 NRLP54845 237 aa16.86■□□□□ 0.29
SNRNP48-203ENST00000634363 HAUS6Q7Z4H7 955 aa16.86■□□□□ 0.29
SNRNP48-203ENST00000634363 USP37Q86T82 979 aa16.86■□□□□ 0.29
SNRNP48-203ENST00000634363 SFR1Q86XK3 245 aa16.86■□□□□ 0.29
SNRNP48-203ENST00000634363 MFSD6LQ8IWD5 586 aa16.86■□□□□ 0.29
SNRNP48-203ENST00000634363 CCDC65Q8IXS2 484 aa16.86■□□□□ 0.29
SNRNP48-203ENST00000634363 YAF2Q8IY57 180 aa16.86■□□□□ 0.29
SNRNP48-203ENST00000634363 CSGALNACT1Q8TDX6 532 aa16.86■□□□□ 0.29
SNRNP48-203ENST00000634363 DNAJC19Q96DA6 116 aa16.86■□□□□ 0.29
SNRNP48-203ENST00000634363 KIF12Q96FN5 646 aa16.86■□□□□ 0.29
SNRNP48-203ENST00000634363 FAM126AQ9BYI3 521 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms