RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 OSTNP61366 133 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 CREMQ03060 361 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 GRIN1Q05586 938 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 DSC1Q08554 894 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 MAPK7Q13164 816 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 TUSC3Q13454 348 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 HSP90AA2PQ14568 343 aaPredicted RBP6.99□□□□□ -1.29
TCF4-249ENST00000625716 PTPAQ15257 358 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 PTPN14Q15678 1187 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 USP41Q3LFD5 358 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 ARSHQ5FYA8 562 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 EEF1DP3Q658K8 133 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 ANKRD54Q6NXT1 300 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 MPZL3Q6UWV2 235 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 TMEM184AQ6ZMB5 413 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 CCDC73Q6ZRK6 1079 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 SV2BQ7L1I2 683 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 HAUS6Q7Z4H7 955 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 BTLAQ7Z6A9 289 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 TMEM173Q86WV6 379 aaPredicted RBP6.99□□□□□ -1.29
TCF4-249ENST00000625716 ADHFE1Q8IWW8 467 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 Q8N3U1 123 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 BCL7CQ8WUZ0 217 aaPredicted RBP6.99□□□□□ -1.29
TCF4-249ENST00000625716 EPSTI1Q96J88 318 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 MSLNLQ96KJ4 702 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 CLIC6Q96NY7 704 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 KLHL5Q96PQ7 755 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 USP28Q96RU2 1077 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 REEP2Q9BRK0 252 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 HERC2P3Q9BVR0 1158 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 TARS2Q9BW92 718 aaKnown RBP6.99□□□□□ -1.29
TCF4-249ENST00000625716 C1QTNF1Q9BXJ1 281 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 PANK2Q9BZ23 570 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 DZANK1Q9NVP4 752 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 ARHGAP28Q9P2N2 729 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 ANKFY1Q9P2R3 1169 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 DPP7Q9UHL4 492 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 FBXO2Q9UK22 296 aaPredicted RBP6.99□□□□□ -1.29
TCF4-249ENST00000625716 ADAM28Q9UKQ2 775 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 IRAK3Q9Y616 596 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 KIAA1671Q9BY89 1806 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 CHD9Q3L8U1 2897 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 CASTOR2A6NHX0 329 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 SPTLC2O15270 562 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 CLDN3O15551 220 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 TRAPPC3O43617 180 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 B4GALT3O60512 393 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 PPP6R2O75170 966 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 TOM1L1O75674 476 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 GLP2RO95838 553 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 EDN1P05305 212 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 ZSCAN22P10073 491 aaPredicted RBP6.98□□□□□ -1.29
TCF4-249ENST00000625716 ALADP13716 330 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 STAT6P42226 847 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 NASPP49321 788 aaPredicted RBP6.98□□□□□ -1.29
TCF4-249ENST00000625716 NCKAP1LP55160 1127 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 RBM10P98175 930 aaKnown RBP6.98□□□□□ -1.29
TCF4-249ENST00000625716 ITIH3Q06033 890 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 ELAVL2Q12926 359 aaKnown RBP6.98□□□□□ -1.29
TCF4-249ENST00000625716 KYAT1Q16773 422 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 FOXD4L6Q3SYB3 417 aaPredicted RBP6.98□□□□□ -1.29
TCF4-249ENST00000625716 ATAT1Q5SQI0 421 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 FUT10Q6P4F1 479 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 PDXDC1Q6P996 788 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 DCLRE1AQ6PJP8 1040 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 FOXD4L3Q6VB84 417 aaPredicted RBP6.98□□□□□ -1.29
TCF4-249ENST00000625716 ZPBP2Q6X784 338 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 DYMQ7RTS9 669 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 CEP57Q86XR8 500 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 SMRP1Q8NCR6 262 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 TMEM161BQ8NDZ6 487 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 GSTCDQ8NEC7 633 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 VN1R2Q8NFZ6 395 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 RABGGTAQ92696 567 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 BHMTQ93088 406 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 RIPOR3Q96MK2 946 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 UROC1Q96N76 676 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 APOL5Q9BWW9 433 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 GSX2Q9BZM3 304 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 LRRC27Q9C0I9 530 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 CDT1Q9H211 546 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.98□□□□□ -1.29
TCF4-249ENST00000625716 BLOC1S4Q9NUP1 217 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 SLC38A7Q9NVC3 462 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 MARCH5Q9NX47 278 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 CFAP45Q9UL16 551 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 TBX20Q9UMR3 447 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 USP15Q9Y4E8 981 aaPredicted RBP6.98□□□□□ -1.29
TCF4-249ENST00000625716 HCFC2Q9Y5Z7 792 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 COL6A3P12111 3177 aa6.98□□□□□ -1.29
TCF4-249ENST00000625716 SF3B1O75533 1304 aaKnown RBP eCLIP6.98□□□□□ -1.293e-6■■■■■ 70.4
TCF4-249ENST00000625716 SMIM28A0A1B0GU29 152 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 PTGESO14684 152 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 HNRNPDLO14979 420 aaKnown RBP6.97□□□□□ -1.29
TCF4-249ENST00000625716 CUTAO60888 179 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 YEATS4O95619 227 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 GLUD1P00367 558 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 F13A1P00488 732 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 CNPP09543 421 aaKnown RBP6.97□□□□□ -1.29
TCF4-249ENST00000625716 IDEP14735 1019 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms