RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 MRFAP1L1Q96HT8 127 aa21.29■■□□□ 1
PDLIM2-221ENST00000622702 NT5C1BQ96P26 610 aa21.29■■□□□ 1
PDLIM2-221ENST00000622702 APOBEC3GQ9HC16 384 aaKnown RBP21.29■■□□□ 1
PDLIM2-221ENST00000622702 SIX2Q9NPC8 291 aa21.29■■□□□ 1
PDLIM2-221ENST00000622702 GDAP2Q9NXN4 497 aa21.29■■□□□ 1
PDLIM2-221ENST00000622702 NUB1Q9Y5A7 615 aa21.29■■□□□ 1
PDLIM2-221ENST00000622702 KPNA7A9QM74 516 aa21.28■■□□□ 1
PDLIM2-221ENST00000622702 F8W810 466 aa21.28■■□□□ 1
PDLIM2-221ENST00000622702 SLC34A2O95436 690 aa21.28■■□□□ 1
PDLIM2-221ENST00000622702 PLCB3Q01970 1234 aa21.28■■□□□ 1
PDLIM2-221ENST00000622702 KRT17Q04695 432 aa21.28■■□□□ 1
PDLIM2-221ENST00000622702 WDR72Q3MJ13 1102 aa21.28■■□□□ 1
PDLIM2-221ENST00000622702 ZNF667Q5HYK9 610 aa21.28■■□□□ 1
PDLIM2-221ENST00000622702 SPOPLQ6IQ16 392 aa21.28■■□□□ 1
PDLIM2-221ENST00000622702 TMEM173Q86WV6 379 aaPredicted RBP21.28■■□□□ 1
PDLIM2-221ENST00000622702 LSM14BQ9BX40 385 aaKnown RBP21.28■■□□□ 1
PDLIM2-221ENST00000622702 APEX2Q9UBZ4 518 aa21.28■■□□□ 1
PDLIM2-221ENST00000622702 ADAM28Q9UKQ2 775 aa21.28■■□□□ 1
PDLIM2-221ENST00000622702 TADA2AO75478 443 aa21.27■■□□□ 1
PDLIM2-221ENST00000622702 UBE3AQ05086 875 aa21.27■■□□□ 1
PDLIM2-221ENST00000622702 CAMK1Q14012 370 aa21.27■■□□□ 1
PDLIM2-221ENST00000622702 TIGD5Q53EQ6 642 aa21.27■■□□□ 1
PDLIM2-221ENST00000622702 TATDN2Q93075 761 aa21.27■■□□□ 1
PDLIM2-221ENST00000622702 TMEM169Q96HH4 297 aa21.27■■□□□ 1
PDLIM2-221ENST00000622702 IGSF21Q96ID5 467 aa21.27■■□□□ 1
PDLIM2-221ENST00000622702 NIF3L1Q9GZT8 377 aa21.27■■□□□ 1
PDLIM2-221ENST00000622702 PUF60Q9UHX1 559 aaKnown RBP21.27■■□□□ 1
PDLIM2-221ENST00000622702 TRAPPC3O43617 180 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 EFEMP2O95967 443 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 P4HA1P13674 534 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 KLK7P49862 253 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 GCNT1Q02742 428 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 LRMPQ12912 555 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 PTPN21Q16825 1174 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 KLHDC7AQ5VTJ3 777 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 PHLDB3Q6NSJ2 640 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 LIMS2Q7Z4I7 341 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 HASPINQ8TF76 798 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 BCL7CQ8WUZ0 217 aaPredicted RBP21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 ELMO3Q96BJ8 720 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 SUSD3Q96L08 255 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 LZTS1Q9Y250 596 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 DAAM1Q9Y4D1 1078 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 SNX9Q9Y5X1 595 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 ATG2AQ2TAZ0 1938 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 ITIH6Q6UXX5 1313 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 M0QZQ0 153 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 NOL4O94818 638 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 RFX1P22670 979 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 ASPAP45381 313 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 BRCC3P46736 316 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 TNNC1P63316 161 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 APBA1Q02410 837 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 ELAVL2Q12926 359 aaKnown RBP21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 DPH6Q7L8W6 267 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 VSTM4Q8IW00 320 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 SENP8Q96LD8 212 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 FAM81BQ96LP2 452 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 PCMTD1Q96MG8 357 aaPredicted RBP21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 BCO2Q9BYV7 579 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 GANQ9H2C0 597 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 FAM207AQ9NSI2 230 aaPredicted RBP21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 NXF1Q9UBU9 619 aaKnown RBP21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 FBXL5Q9UKA1 691 aa21.26■□□□□ 0.99
PDLIM2-221ENST00000622702 SF3B1O75533 1304 aaKnown RBP eCLIP21.25■□□□□ 0.99
PDLIM2-221ENST00000622702 ARHGEF37A1IGU5 675 aa21.25■□□□□ 0.99
PDLIM2-221ENST00000622702 CLSTN1O94985 981 aa21.25■□□□□ 0.99
PDLIM2-221ENST00000622702 ADCY5O95622 1261 aa21.25■□□□□ 0.99
PDLIM2-221ENST00000622702 UCHL3P15374 230 aa21.25■□□□□ 0.99
PDLIM2-221ENST00000622702 TBXAS1P24557 533 aaPredicted RBP21.25■□□□□ 0.99
PDLIM2-221ENST00000622702 IRS1P35568 1242 aa21.25■□□□□ 0.99
PDLIM2-221ENST00000622702 ERVFC1P60507 584 aa21.25■□□□□ 0.99
PDLIM2-221ENST00000622702 FIGNQ5HY92 759 aa21.25■□□□□ 0.99
PDLIM2-221ENST00000622702 FUT10Q6P4F1 479 aa21.25■□□□□ 0.99
PDLIM2-221ENST00000622702 DSTYKQ6XUX3 929 aa21.25■□□□□ 0.99
PDLIM2-221ENST00000622702 ARHGEF19Q8IW93 802 aa21.25■□□□□ 0.99
PDLIM2-221ENST00000622702 PPM1KQ8N3J5 372 aa21.25■□□□□ 0.99
PDLIM2-221ENST00000622702 TOP6BLQ8N6T0 577 aa21.25■□□□□ 0.99
PDLIM2-221ENST00000622702 NEK11Q8NG66 645 aa21.25■□□□□ 0.99
PDLIM2-221ENST00000622702 MICAL1Q8TDZ2 1067 aa21.25■□□□□ 0.99
PDLIM2-221ENST00000622702 FAM124BQ9H5Z6 455 aaPredicted RBP21.25■□□□□ 0.99
PDLIM2-221ENST00000622702 CYP3A43Q9HB55 503 aa21.25■□□□□ 0.99
PDLIM2-221ENST00000622702 TLR9Q9NR96 1032 aa21.25■□□□□ 0.99
PDLIM2-221ENST00000622702 POLIQ9UNA4 740 aa21.25■□□□□ 0.99
PDLIM2-221ENST00000622702 CYB561D2O14569 222 aa21.24■□□□□ 0.99
PDLIM2-221ENST00000622702 EPHB6O15197 1021 aa21.24■□□□□ 0.99
PDLIM2-221ENST00000622702 FAM163BP0C2L3 166 aa21.24■□□□□ 0.99
PDLIM2-221ENST00000622702 CUL2Q13617 745 aa21.24■□□□□ 0.99
PDLIM2-221ENST00000622702 SPECC1LQ69YQ0 1117 aa21.24■□□□□ 0.99
PDLIM2-221ENST00000622702 ENOSF1Q7L5Y1 443 aa21.24■□□□□ 0.99
PDLIM2-221ENST00000622702 RNF168Q8IYW5 571 aaPredicted RBP21.24■□□□□ 0.99
PDLIM2-221ENST00000622702 JAKMIP2Q96AA8 810 aa21.24■□□□□ 0.99
PDLIM2-221ENST00000622702 NUP58Q9BVL2 599 aa21.24■□□□□ 0.99
PDLIM2-221ENST00000622702 GPR62Q9BZJ7 368 aa21.24■□□□□ 0.99
PDLIM2-221ENST00000622702 NSUN3Q9H649 340 aaKnown RBP21.24■□□□□ 0.99
PDLIM2-221ENST00000622702 UBE2TQ9NPD8 197 aaPredicted RBP21.24■□□□□ 0.99
PDLIM2-221ENST00000622702 PCDHB8Q9UN66 801 aa21.24■□□□□ 0.99
PDLIM2-221ENST00000622702 MYO7AQ13402 2215 aa21.23■□□□□ 0.99
PDLIM2-221ENST00000622702 I3L4J1 428 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms