RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 ZNF606Q8WXB4 792 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 MAML1Q92585 1016 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 TMEM143Q96AN5 459 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 GRAMD1AQ96CP6 724 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 TTC25Q96NG3 672 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 SLITRK1Q96PX8 696 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 TARS2Q9BW92 718 aaKnown RBP10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 HEMGNQ9BXL5 484 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 ZNF518BQ9C0D4 1074 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 CCDC113Q9H0I3 377 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 PPCSQ9HAB8 311 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 UBN1Q9NPG3 1134 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 PICK1Q9NRD5 415 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 NRBP2Q9NSY0 501 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 DDX56Q9NY93 547 aaKnown RBP10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 PIM2Q9P1W9 311 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 PRKAG3Q9UGI9 489 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 SCAF8Q9UPN6 1271 aaKnown RBP10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 NAALADL1Q9UQQ1 740 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 WDR90Q96KV7 1748 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 GSTTP1A0A1W2PQM5 241 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 LRRIQ4A6NIV6 560 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 TCP11X1B4DZS4 312 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 SUN1O94901 812 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 EDN1P05305 212 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 CETPP11597 493 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 BRAFP15056 766 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 CREB1P16220 341 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 CD58P19256 250 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 IFNAR2P48551 515 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 GMPSP49915 693 aaPredicted RBP10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 ELF3P78545 371 aaPredicted RBP10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 EN1Q05925 392 aaPredicted RBP10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 ZNF252P-AS1Q0IIN9 211 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 RIPK1Q13546 671 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 NCOA4Q13772 614 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 MPP2Q14168 576 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 LLGL1Q15334 1064 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 PREPLQ4J6C6 727 aaPredicted RBP10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 SH3D19Q5HYK7 790 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 ZBTB41Q5SVQ8 909 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 PPP1R15BQ5SWA1 713 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 WLSQ5T9L3 541 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 PPP1R21Q6ZMI0 780 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 SPOCD1Q6ZMY3 1216 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 RPAINQ86UA6 219 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 PASD1Q8IV76 773 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 CYP4X1Q8N118 509 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 ANKRD35Q8N283 1001 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 ALLCQ8N6M5 410 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 CCDC63Q8NA47 563 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 DYDC1Q8WWB3 177 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 NKD2Q969F2 451 aaPredicted RBP10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 ZKSCAN4Q969J2 545 aaPredicted RBP10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 MAGEB18Q96M61 343 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 CFAP57Q96MR6 1250 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 PCYT2Q99447 389 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 TACO1Q9BSH4 297 aaKnown RBP10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 PHACTR1Q9C0D0 580 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 HOXC10Q9NYD6 342 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 FBXO40Q9UH90 709 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 TPX2Q9ULW0 747 aaKnown RBP10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 PCDHGC3Q9UN70 934 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 EFR3BQ9Y2G0 817 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 ARL2BPQ9Y2Y0 163 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 BRCA1P38398 1863 aaKnown RBP10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 A0A0G2JMZ2 1700 aa10.18□□□□□ -0.78
IGHV3-54-201ENST00000622166 hCG_1818297A0A087WSY0 165 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 SPDYE16A6NNV3 312 aaPredicted RBP10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 MAGEB2O15479 319 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 FAM189A1O60320 539 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 MAFO75444 373 aaPredicted RBP10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 TJP3O95049 919 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 KRT1P04264 644 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 EFNA5P52803 228 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 HMGCS2P54868 508 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 VCPP55072 806 aaKnown RBP10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 GSCP56915 257 aaPredicted RBP10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 SP4Q02446 784 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 ACVR2BQ13705 512 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 CAPSQ13938 189 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 PIGHQ14442 188 aaPredicted RBP10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 OASLQ15646 514 aaKnown RBP10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 P3H1Q32P28 736 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 C2CD6Q53TS8 623 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 FAM160B1Q5W0V3 765 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 RNF43Q68DV7 783 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 MFSD7Q6UXD7 560 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 RGS9BPQ6ZS82 235 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 ARHGEF18Q6ZSZ5 1173 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 SPATA21Q7Z572 469 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 CCDC91Q7Z6B0 441 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 FAM228AQ86W67 206 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 APOBEC3FQ8IUX4 373 aaKnown RBP10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 MICALL2Q8IY33 904 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 GBP7Q8N8V2 638 aaPredicted RBP10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 TMEM35BQ8NCS4 154 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 SLC7A3Q8WY07 619 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 PWWP2AQ96N64 755 aa10.17□□□□□ -0.78
IGHV3-54-201ENST00000622166 FRMD8P1Q9BZ68 369 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms