RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 ARL13BQ3SXY8 428 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 ARHGAP15Q53QZ3 475 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 EOGTQ5NDL2 527 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 JAKMIP3Q5VZ66 844 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 TSHZ3Q63HK5 1081 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 ANO7Q6IWH7 933 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 CC2D1AQ6P1N0 951 aaPredicted RBP2.63□□□□□ -1.99
CPNE3-211ENST00000621526 SLC27A1Q6PCB7 646 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 INO80CQ6PI98 192 aaPredicted RBP2.63□□□□□ -1.99
CPNE3-211ENST00000621526 PADI6Q6TGC4 694 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 CD300LGQ6UXG3 332 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 TMEM92Q6UXU6 159 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 GAREM2Q75VX8 874 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 PRICKLE2Q7Z3G6 844 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 CATIPQ7Z7H3 387 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 METTL3Q86U44 580 aaKnown RBP2.63□□□□□ -1.99
CPNE3-211ENST00000621526 ERICH1Q86X53 443 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 PLA2G4DQ86XP0 818 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 TICAM1Q8IUC6 712 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 TBC1D10CQ8IV04 446 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 CMTM8Q8IZV2 173 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 MIER1Q8N108 512 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 EXD3Q8N9H8 876 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 CADM4Q8NFZ8 388 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 TTC8Q8TAM2 541 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 SPATA20Q8TB22 786 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 PI4K2BQ8TCG2 481 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 RLN3Q8WXF3 142 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 TSC1Q92574 1164 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 EZH1Q92800 747 aaPredicted RBP2.63□□□□□ -1.99
CPNE3-211ENST00000621526 PSMG2Q969U7 264 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 CCDC97Q96F63 343 aaPredicted RBP2.63□□□□□ -1.99
CPNE3-211ENST00000621526 HIC2Q96JB3 615 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 ZFYVE19Q96K21 471 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 PAAF1Q9BRP4 392 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 ZNF577Q9BSK1 485 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 MTA3Q9BTC8 594 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 SLC46A2Q9BY10 475 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 EIF2AQ9BY44 585 aaKnown RBP2.63□□□□□ -1.99
CPNE3-211ENST00000621526 NFKBIZQ9BYH8 718 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 TPSD1Q9BZJ3 242 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 ATXN3LQ9H3M9 355 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 NXF3Q9H4D5 531 aaKnown RBP2.63□□□□□ -1.99
CPNE3-211ENST00000621526 SLITRK6Q9H5Y7 841 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 MINDY3Q9H8M7 445 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 ECT2Q9H8V3 914 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 KIF9Q9HAQ2 790 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 PRDM16Q9HAZ2 1276 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 OSGEPQ9NPF4 335 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 RIC8AQ9NPQ8 531 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 HPS4Q9NQG7 708 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 TDP1Q9NUW8 608 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 POLR3BQ9NW08 1133 aaPredicted RBP2.63□□□□□ -1.99
CPNE3-211ENST00000621526 SEC63Q9UGP8 760 aaKnown RBP2.63□□□□□ -1.99
CPNE3-211ENST00000621526 TCEAL9Q9UHQ7 104 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 SAMM50Q9Y512 469 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 PAXBP1Q9Y5B6 917 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 COL4A3BPQ9Y5P4 624 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 DOCK8Q8NF50 2099 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 ITPR2Q14571 2701 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 LCTP09848 1927 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 NCANO14594 1321 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 MYH7BA7E2Y1 1941 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 GREB1Q4ZG55 1949 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 ERICH2A1L162 156 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 MYMKA6NI61 221 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 PTGESO14684 152 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 TSPAN1O60635 241 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 DKC1O60832 514 aaKnown RBP eCLIP2.62□□□□□ -1.99
CPNE3-211ENST00000621526 CILPO75339 1184 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 RECQL4O94761 1208 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 ERLIN2O94905 339 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 KIF4AO95239 1232 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 ITGB2P05107 769 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 TCF3P15923 654 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 ARF4P18085 180 aaPredicted RBP2.62□□□□□ -1.99
CPNE3-211ENST00000621526 PAX3P23760 479 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 AKAP5P24588 427 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 CDC25CP30307 473 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 RPL9P32969 192 aaKnown RBP2.62□□□□□ -1.99
CPNE3-211ENST00000621526 AVPR1AP37288 418 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 RFC5P40937 340 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 EIF2DP41214 584 aaKnown RBP2.62□□□□□ -1.99
CPNE3-211ENST00000621526 MATKP42679 507 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 TUFMP49411 452 aaKnown RBP2.62□□□□□ -1.99
CPNE3-211ENST00000621526 CLK2P49760 499 aaKnown RBP2.62□□□□□ -1.99
CPNE3-211ENST00000621526 PCBP4P57723 403 aaKnown RBP2.62□□□□□ -1.99
CPNE3-211ENST00000621526 E2F1Q01094 437 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 SETQ01105 290 aaPredicted RBP2.62□□□□□ -1.99
CPNE3-211ENST00000621526 PRKCEQ02156 737 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 RPL6Q02878 288 aaKnown RBP2.62□□□□□ -1.99
CPNE3-211ENST00000621526 PTH1RQ03431 593 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 CCDC173Q0VFZ6 552 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 LAMTOR4Q0VGL1 99 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 TWF1Q12792 350 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 MYO1EQ12965 1108 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 NFATC3Q12968 1075 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 TRDNQ13061 729 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 PSMD2Q13200 908 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 GPR17Q13304 367 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms