RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 SMC1AQ14683 1233 aaKnown RBP10.57□□□□□ -0.72
VTA1-205ENST00000620996 CYP4A22Q5TCH4 519 aa10.57□□□□□ -0.72
VTA1-205ENST00000620996 DCAF12L1Q5VU92 463 aa10.57□□□□□ -0.72
VTA1-205ENST00000620996 ACTRT1Q8TDG2 376 aa10.57□□□□□ -0.72
VTA1-205ENST00000620996 TRIM11Q96F44 468 aa10.57□□□□□ -0.72
VTA1-205ENST00000620996 DPP3Q9NY33 737 aa10.57□□□□□ -0.72
VTA1-205ENST00000620996 SIX4Q9UIU6 781 aa10.57□□□□□ -0.72
VTA1-205ENST00000620996 GABRQQ9UN88 632 aa10.57□□□□□ -0.72
VTA1-205ENST00000620996 MROH7Q68CQ1 1323 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 MYADML2A6NDP7 307 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 AKR1A1P14550 325 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 CTGFP29279 349 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 OAS2P29728 719 aaKnown RBP10.56□□□□□ -0.72
VTA1-205ENST00000620996 ASPAP45381 313 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 FCGRTP55899 365 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 MCCD1P59942 119 aaPredicted RBP10.56□□□□□ -0.72
VTA1-205ENST00000620996 NOMO3P69849 1222 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 FAM187BQ17R55 369 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 HSP90B2PQ58FF3 399 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 DCUN1D2Q6PH85 259 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 CXCL17Q6UXB2 119 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 ZNF572Q7Z3I7 529 aaPredicted RBP10.56□□□□□ -0.72
VTA1-205ENST00000620996 HNRNPLLQ8WVV9 542 aaKnown RBP10.56□□□□□ -0.72
VTA1-205ENST00000620996 CELF4Q9BZC1 486 aaKnown RBP10.56□□□□□ -0.72
VTA1-205ENST00000620996 DPH5Q9H2P9 285 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 ZCCHC17Q9NP64 241 aaKnown RBP10.56□□□□□ -0.72
VTA1-205ENST00000620996 MIF4GDA9UHW6 222 aaKnown RBP10.56□□□□□ -0.72
VTA1-205ENST00000620996 SART1O43290 800 aaKnown RBP10.56□□□□□ -0.72
VTA1-205ENST00000620996 CARSP49589 748 aaKnown RBP10.56□□□□□ -0.72
VTA1-205ENST00000620996 CDR1P51861 262 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 ITIH3Q06033 890 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 POU5F1BQ06416 359 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 HIC1Q14526 733 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 ODF2Q5BJF6 829 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 MFSD14CQ5VZR4 134 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 NOTUMQ6P988 496 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 TRIM72Q6ZMU5 477 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 APBB1IPQ7Z5R6 666 aaPredicted RBP10.56□□□□□ -0.72
VTA1-205ENST00000620996 HEXIM2Q96MH2 286 aaKnown RBP10.56□□□□□ -0.72
VTA1-205ENST00000620996 CXCL16Q9H2A7 254 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 ACBD3Q9H3P7 528 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 NXF3Q9H4D5 531 aaKnown RBP10.56□□□□□ -0.72
VTA1-205ENST00000620996 SUFUQ9UMX1 484 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 L1RE1Q9UN81 338 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 SIP14410 1827 aa10.56□□□□□ -0.72
VTA1-205ENST00000620996 A0A1B0GUA9 196 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 PIK3R2O00459 728 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 TLR3O15455 904 aaKnown RBP10.55□□□□□ -0.72
VTA1-205ENST00000620996 P4HA1P13674 534 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 FLT3LGP49771 235 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 CENPCQ03188 943 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 TRADDQ15628 312 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 DNAJC24Q6P3W2 148 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 SLC27A1Q6PCB7 646 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 DDX42Q86XP3 938 aaKnown RBP eCLIP10.55□□□□□ -0.72
VTA1-205ENST00000620996 TMEM35BQ8NCS4 154 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 TFAP2BQ92481 460 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 NAP1L3Q99457 506 aaPredicted RBP10.55□□□□□ -0.72
VTA1-205ENST00000620996 XYLT2Q9H1B5 865 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 SPC25Q9HBM1 224 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 KLHL11Q9NVR0 708 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 HMGXB4Q9UGU5 601 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 NR2E1Q9Y466 385 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 TLL2Q9Y6L7 1015 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 TTI1O43156 1089 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 AOC2O75106 756 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 MYBL1P10243 752 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 NFX1Q12986 1120 aaKnown RBP10.55□□□□□ -0.72
VTA1-205ENST00000620996 TRIM32Q13049 653 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 ERICH1Q86X53 443 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 CCDC26Q8TAB7 109 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 KATNAL1Q9BW62 490 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 WNT8AQ9H1J5 351 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 CARD9Q9H257 536 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 ADAMTS10Q9H324 1103 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 ASB7Q9H672 318 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 GJD2Q9UKL4 321 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 CES2O00748 559 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 MEFVO15553 781 aaPredicted RBP10.55□□□□□ -0.72
VTA1-205ENST00000620996 CYP1A1P04798 512 aaPredicted RBP10.55□□□□□ -0.72
VTA1-205ENST00000620996 PYGMP11217 842 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 DARSP14868 501 aaKnown RBP10.55□□□□□ -0.72
VTA1-205ENST00000620996 EIF4BP23588 611 aaKnown RBP10.55□□□□□ -0.72
VTA1-205ENST00000620996 RWDD2BP57060 319 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 RBP5P82980 135 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 PRKCZQ05513 592 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 DCAF4L1Q3SXM0 396 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 GLE1Q53GS7 698 aaKnown RBP10.55□□□□□ -0.72
VTA1-205ENST00000620996 TWF2Q6IBS0 349 aaKnown RBP10.55□□□□□ -0.72
VTA1-205ENST00000620996 DENND1BQ6P3S1 775 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 MON1BQ7L1V2 547 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 C18orf25Q96B23 403 aaPredicted RBP10.55□□□□□ -0.72
VTA1-205ENST00000620996 MCEEQ96PE7 176 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 TRIM51Q9BSJ1 452 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 SDCBP2Q9H190 292 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 MRPL47Q9HD33 250 aaKnown RBP10.55□□□□□ -0.72
VTA1-205ENST00000620996 SNX9Q9Y5X1 595 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 DNAH12Q6ZR08 3092 aa10.55□□□□□ -0.72
VTA1-205ENST00000620996 SMIM35A0A1B0GVV1 85 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 FAM155AB1AL88 458 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms