RNA–Protein interactions for RNA: ENST00000619142.4

GTF2IRD2B-208, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD2B, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-208ENST00000619142 LIN9Q5TKA1 542 aa21.61■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 RPAINQ86UA6 219 aa21.61■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 BEST2Q8NFU1 509 aa21.61■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 ACTRT1Q8TDG2 376 aa21.61■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 TSPAN18Q96SJ8 248 aa21.61■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 SDCBP2Q9H190 292 aa21.61■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 CXCL16Q9H2A7 254 aa21.61■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 SMYD3Q9H7B4 428 aa21.61■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 PCDHGC3Q9UN70 934 aa21.61■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 NOC2LQ9Y3T9 749 aaKnown RBP21.61■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 MIF4GDA9UHW6 222 aaKnown RBP21.61■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 DDX3YO15523 660 aaKnown RBP21.61■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 PAEPP09466 180 aa21.61■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 CDH8P55286 799 aa21.61■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 C1QBPQ07021 282 aaKnown RBP21.61■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 MYO1EQ12965 1108 aa21.61■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 MESDQ14696 234 aa21.61■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 PNKPQ96T60 521 aa21.61■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 ADAM22Q9P0K1 906 aa21.61■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 DDX20Q9UHI6 824 aaKnown RBP21.61■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 THSD7BQ9C0I4 1608 aa21.6■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 TARSL2A2RTX5 802 aaKnown RBP21.6■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 CEP104O60308 925 aa21.6■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 CILPO75339 1184 aa21.6■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 MYCNP04198 464 aaPredicted RBP21.6■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 RRM1P23921 792 aa21.6■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 SSTR3P32745 418 aaPredicted RBP21.6■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 BRD3Q15059 726 aa21.6■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 CCDC70Q6NSX1 233 aa21.6■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 RASGEF1CQ8N431 466 aa21.6■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 USP38Q8NB14 1042 aa21.6■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 RAET1EQ8TD07 263 aa21.6■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 PXYLP1Q8TE99 480 aa21.6■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 ZSWIM1Q9BR11 485 aa21.6■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 APOL6Q9BWW8 343 aa21.6■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 ZNF518BQ9C0D4 1074 aa21.6■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 CCDC151A5D8V7 595 aa21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 TMEM110-MUSTN1A8MSY1 372 aa21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 AKAP5P24588 427 aa21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 RAD23BP54727 409 aa21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 TNNC1P63316 161 aa21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 XKR4Q5GH76 650 aa21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 TTC39CQ8N584 583 aa21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 TFAP2BQ92481 460 aa21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 WNT8BQ93098 351 aa21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 C11orf70Q9BRQ4 267 aa21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 UBQLN1Q9UMX0 589 aaKnown RBP21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 MED7O43513 233 aa21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 COMTP21964 271 aa21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 YY1P25490 414 aa21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 CDH5P33151 784 aaPredicted RBP21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 PTP4A2Q12974 167 aa21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 RNF180Q86T96 592 aa21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 TMEM35BQ8NCS4 154 aa21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 WHAMMQ8TF30 809 aa21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 SENP6Q9GZR1 1112 aaPredicted RBP21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 CARD9Q9H257 536 aa21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 RBM12Q9NTZ6 932 aaKnown RBP21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 PARP2Q9UGN5 583 aa21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 IPPQ9Y573 584 aa21.59■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 GRIN2DO15399 1336 aa21.58■■□□□ 1.05
GTF2IRD2B-208ENST00000619142 PGRMC1O00264 195 aaKnown RBP21.58■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 RPS6KA5O75582 802 aa21.58■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 TWF2Q6IBS0 349 aaKnown RBP21.58■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 WDR93Q6P2C0 686 aa21.58■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 TMCO3Q6UWJ1 677 aa21.58■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 LRRC52Q8N7C0 313 aa21.58■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 UBL4BQ8N7F7 174 aa21.58■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 SLC4A11Q8NBS3 891 aa21.58■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 SMG8Q8ND04 991 aaKnown RBP21.58■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 WNT8AQ9H1J5 351 aa21.58■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 RNF216Q9NWF9 866 aaPredicted RBP21.58■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 TUBGCP4Q9UGJ1 667 aa21.58■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 CEP83Q9Y592 693 aa21.58■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 SCN1AP35498 2009 aa21.58■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 TLR3O15455 904 aaKnown RBP21.57■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 CABYRO75952 493 aa21.57■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 CHRNA1P02708 482 aa21.57■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 KCNE1P15382 129 aa21.57■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 CD19P15391 556 aa21.57■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 MMP8P22894 467 aa21.57■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 VEGFBP49765 207 aa21.57■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 RNASE9P60153 205 aaKnown RBP21.57■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 MGAT3Q09327 533 aa21.57■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 INCA1Q0VD86 236 aa21.57■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 GLRA4Q5JXX5 417 aa21.57■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 MMS22LQ6ZRQ5 1243 aa21.57■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 TMEM176AQ96HP8 235 aa21.57■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 BTBD6Q96KE9 485 aa21.57■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 RNF39Q9H2S5 420 aa21.57■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 MRPL47Q9HD33 250 aaKnown RBP21.57■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 ANAPC7Q9UJX3 599 aa21.57■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 TMEM59LQ9UK28 342 aa21.57■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 TTC7AQ9ULT0 858 aaPredicted RBP21.57■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 BARX2Q9UMQ3 279 aaPredicted RBP21.57■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 ST3GAL5Q9UNP4 418 aa21.57■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 SMIM28A0A1B0GU29 152 aa21.57■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 XPOTO43592 962 aaKnown RBP21.57■■□□□ 1.04
GTF2IRD2B-208ENST00000619142 CD4P01730 458 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms