RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 GPR88Q9GZN0 384 aa17.94■□□□□ 0.46
TRAPPC3-210ENST00000617904 CDHR5Q9HBB8 845 aa17.94■□□□□ 0.46
TRAPPC3-210ENST00000617904 SLC38A7Q9NVC3 462 aa17.94■□□□□ 0.46
TRAPPC3-210ENST00000617904 SNTG2Q9NY99 539 aa17.94■□□□□ 0.46
TRAPPC3-210ENST00000617904 PTPRJQ12913 1337 aa17.94■□□□□ 0.46
TRAPPC3-210ENST00000617904 CHD9Q3L8U1 2897 aa17.93■□□□□ 0.46
TRAPPC3-210ENST00000617904 A0A0A6YYK5 440 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC3-210ENST00000617904 MACROD2A1Z1Q3 448 aa17.93■□□□□ 0.46
TRAPPC3-210ENST00000617904 PITPNM1O00562 1244 aa17.93■□□□□ 0.46
TRAPPC3-210ENST00000617904 MED7O43513 233 aa17.93■□□□□ 0.46
TRAPPC3-210ENST00000617904 ITGB3P05106 788 aa17.93■□□□□ 0.46
TRAPPC3-210ENST00000617904 CYP11B1P15538 503 aa17.93■□□□□ 0.46
TRAPPC3-210ENST00000617904 RFC2P35250 354 aa17.93■□□□□ 0.46
TRAPPC3-210ENST00000617904 HIC1Q14526 733 aa17.93■□□□□ 0.46
TRAPPC3-210ENST00000617904 CCDC85BQ15834 202 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC3-210ENST00000617904 FAM26DQ5JW98 314 aa17.93■□□□□ 0.46
TRAPPC3-210ENST00000617904 RHOT2Q8IXI1 618 aa17.93■□□□□ 0.46
TRAPPC3-210ENST00000617904 EFCAB13Q8IY85 973 aa17.93■□□□□ 0.46
TRAPPC3-210ENST00000617904 SLC35F6Q8N357 371 aa17.93■□□□□ 0.46
TRAPPC3-210ENST00000617904 RPS6KC1Q96S38 1066 aa17.93■□□□□ 0.46
TRAPPC3-210ENST00000617904 VRTNQ9H8Y1 702 aa17.93■□□□□ 0.46
TRAPPC3-210ENST00000617904 UBN1Q9NPG3 1134 aa17.93■□□□□ 0.46
TRAPPC3-210ENST00000617904 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.93■□□□□ 0.462e-12■■■■■ 298.1
TRAPPC3-210ENST00000617904 ST3GAL5Q9UNP4 418 aa17.93■□□□□ 0.46
TRAPPC3-210ENST00000617904 NOC2LQ9Y3T9 749 aaKnown RBP17.93■□□□□ 0.46
TRAPPC3-210ENST00000617904 ANKRD62A6NC57 917 aa17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 NFICP08651 508 aa17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 CTSHP09668 335 aa17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 TMEM253P0C7T8 217 aa17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 ITGA4P13612 1032 aa17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 NOP2P46087 812 aaKnown RBP17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 BFSP2Q13515 415 aa17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 PPP2R2DQ66LE6 453 aa17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 FAM228AQ86W67 206 aa17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 GPIHBP1Q8IV16 184 aa17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 LRRC52Q8N7C0 313 aa17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 RBBP8NLQ8NC74 664 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 MNS1Q8NEH6 495 aa17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 SLC30A5Q8TAD4 765 aa17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 CAGE1Q8TC20 777 aa17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 EPS8L1Q8TE68 723 aa17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 ATXN2LQ8WWM7 1075 aaKnown RBP17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 HPDLQ96IR7 371 aa17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 APOL6Q9BWW8 343 aa17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 RNF216Q9NWF9 866 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 CNTN3Q9P232 1028 aa17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 AGAP1Q9UPQ3 857 aa17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 JRKLQ9Y4A0 524 aa17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 NUB1Q9Y5A7 615 aa17.92■□□□□ 0.46
TRAPPC3-210ENST00000617904 TANC1Q9C0D5 1861 aa17.91■□□□□ 0.46
TRAPPC3-210ENST00000617904 DDX3XO00571 662 aaKnown RBP eCLIP17.91■□□□□ 0.462e-8■■■■■ 37.2
TRAPPC3-210ENST00000617904 ZNF263O14978 683 aa17.91■□□□□ 0.46
TRAPPC3-210ENST00000617904 RECQL4O94761 1208 aa17.91■□□□□ 0.46
TRAPPC3-210ENST00000617904 CST3P01034 146 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC3-210ENST00000617904 PNMA6AP0CW24 399 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC3-210ENST00000617904 CYP3A5P20815 502 aa17.91■□□□□ 0.46
TRAPPC3-210ENST00000617904 GNA15P30679 374 aa17.91■□□□□ 0.46
TRAPPC3-210ENST00000617904 WNT7BP56706 349 aa17.91■□□□□ 0.46
TRAPPC3-210ENST00000617904 WDR72Q3MJ13 1102 aa17.91■□□□□ 0.46
TRAPPC3-210ENST00000617904 TMEM270Q6UE05 265 aa17.91■□□□□ 0.46
TRAPPC3-210ENST00000617904 TMEM192Q8IY95 271 aa17.91■□□□□ 0.46
TRAPPC3-210ENST00000617904 C1orf127Q8N9H9 656 aa17.91■□□□□ 0.46
TRAPPC3-210ENST00000617904 MSANTD4Q8NCY6 345 aa17.91■□□□□ 0.46
TRAPPC3-210ENST00000617904 TMEM40Q8WWA1 233 aa17.91■□□□□ 0.46
TRAPPC3-210ENST00000617904 KAT5Q92993 513 aa17.91■□□□□ 0.46
TRAPPC3-210ENST00000617904 EIF2AQ9BY44 585 aaKnown RBP17.91■□□□□ 0.46
TRAPPC3-210ENST00000617904 THEGQ9P2T0 379 aa17.91■□□□□ 0.46
TRAPPC3-210ENST00000617904 CNTN6Q9UQ52 1028 aa17.91■□□□□ 0.46
TRAPPC3-210ENST00000617904 TTC28Q96AY4 2481 aa17.91■□□□□ 0.46
TRAPPC3-210ENST00000617904 TET1Q8NFU7 2136 aa17.9■□□□□ 0.46
TRAPPC3-210ENST00000617904 MYBL1P10243 752 aa17.9■□□□□ 0.46
TRAPPC3-210ENST00000617904 KCNE1P15382 129 aa17.9■□□□□ 0.46
TRAPPC3-210ENST00000617904 PAX3P23760 479 aa17.9■□□□□ 0.46
TRAPPC3-210ENST00000617904 POLR2BP30876 1174 aaKnown RBP17.9■□□□□ 0.46
TRAPPC3-210ENST00000617904 MGAT3Q09327 533 aa17.9■□□□□ 0.46
TRAPPC3-210ENST00000617904 LIN9Q5TKA1 542 aa17.9■□□□□ 0.46
TRAPPC3-210ENST00000617904 SPOPLQ6IQ16 392 aa17.9■□□□□ 0.46
TRAPPC3-210ENST00000617904 ASB2Q96Q27 587 aa17.9■□□□□ 0.46
TRAPPC3-210ENST00000617904 LACRTQ9GZZ8 138 aa17.9■□□□□ 0.46
TRAPPC3-210ENST00000617904 NXF1Q9UBU9 619 aaKnown RBP17.9■□□□□ 0.46
TRAPPC3-210ENST00000617904 PUF60Q9UHX1 559 aaKnown RBP17.9■□□□□ 0.46
TRAPPC3-210ENST00000617904 KIAA1257Q9ULG3 409 aa17.9■□□□□ 0.46
TRAPPC3-210ENST00000617904 IPPQ9Y573 584 aa17.9■□□□□ 0.46
TRAPPC3-210ENST00000617904 TRIP12Q14669 1992 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC3-210ENST00000617904 THAP12O43422 761 aa17.89■□□□□ 0.45
TRAPPC3-210ENST00000617904 SLU7O95391 586 aaKnown RBP17.89■□□□□ 0.45
TRAPPC3-210ENST00000617904 CA3P07451 260 aa17.89■□□□□ 0.45
TRAPPC3-210ENST00000617904 PAEPP09466 180 aa17.89■□□□□ 0.45
TRAPPC3-210ENST00000617904 NSFP46459 744 aaKnown RBP17.89■□□□□ 0.45
TRAPPC3-210ENST00000617904 GALCP54803 685 aa17.89■□□□□ 0.45
TRAPPC3-210ENST00000617904 GPC5P78333 572 aa17.89■□□□□ 0.45
TRAPPC3-210ENST00000617904 GPNMBQ14956 572 aa17.89■□□□□ 0.45
TRAPPC3-210ENST00000617904 SV2CQ496J9 727 aa17.89■□□□□ 0.45
TRAPPC3-210ENST00000617904 FBXO47Q5MNV8 452 aa17.89■□□□□ 0.45
TRAPPC3-210ENST00000617904 SLC47A2Q86VL8 602 aa17.89■□□□□ 0.45
TRAPPC3-210ENST00000617904 CEP112Q8N8E3 955 aa17.89■□□□□ 0.45
TRAPPC3-210ENST00000617904 MYRIPQ8NFW9 859 aa17.89■□□□□ 0.45
TRAPPC3-210ENST00000617904 LNX1Q8TBB1 728 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC3-210ENST00000617904 PHOSPHO2Q8TCD6 241 aa17.89■□□□□ 0.45
TRAPPC3-210ENST00000617904 RFFLQ8WZ73 363 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms