RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 BNC2Q6ZN30 1099 aaPredicted RBP10.75□□□□□ -0.69
CUL4A-212ENST00000617546 HAUS6Q7Z4H7 955 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 PATL1Q86TB9 770 aaKnown RBP10.75□□□□□ -0.69
CUL4A-212ENST00000617546 MTDHQ86UE4 582 aaKnown RBP10.75□□□□□ -0.69
CUL4A-212ENST00000617546 CDR2LQ86X02 465 aaPredicted RBP10.75□□□□□ -0.69
CUL4A-212ENST00000617546 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.75□□□□□ -0.69
CUL4A-212ENST00000617546 DLG3Q92796 817 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 REEP2Q9BRK0 252 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 PHACTR1Q9C0D0 580 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 COA1Q9GZY4 146 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 SHOC2Q9UQ13 582 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 TAF6LQ9Y6J9 622 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 DENND3A2RUS2 1198 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 FDX1P10109 184 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 GPC3P51654 580 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 GRAPQ13588 217 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 LRRC36Q1X8D7 754 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 CCDC80Q76M96 950 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 ADGRF4Q8IZF3 695 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 GRAPLQ8TC17 118 aaPredicted RBP10.74□□□□□ -0.69
CUL4A-212ENST00000617546 FEM1BQ9UK73 627 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 ZCCHC18P0CG32 403 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 ENO3P13929 434 aaPredicted RBP10.74□□□□□ -0.69
CUL4A-212ENST00000617546 EP400NLQ6ZTU2 488 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 NAT9Q9BTE0 207 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 COL15A1P39059 1388 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 H0YIN7 160 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 TNPO2O14787 897 aaKnown RBP10.74□□□□□ -0.69
CUL4A-212ENST00000617546 HNRNPH3P31942 346 aaKnown RBP10.74□□□□□ -0.69
CUL4A-212ENST00000617546 TRIM60Q495X7 471 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 ARID3BQ8IVW6 561 aaPredicted RBP10.74□□□□□ -0.69
CUL4A-212ENST00000617546 FEZF2Q8TBJ5 459 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 SH3TC2Q8TF17 1288 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 C18orf8Q96DM3 657 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 PIK3CDO00329 1044 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 CDH6P55285 790 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 ACTR2P61160 394 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 PPIDQ08752 370 aaKnown RBP10.74□□□□□ -0.69
CUL4A-212ENST00000617546 SCARF1Q14162 830 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 TRIM69Q86WT6 500 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 EXD1Q8NHP7 514 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 CAAP1Q9H8G2 361 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 MPP6Q9NZW5 540 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 SOX13Q9UN79 622 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 HEY1Q9Y5J3 304 aa10.74□□□□□ -0.69
CUL4A-212ENST00000617546 SNX2O60749 519 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 ABHD2P08910 425 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 CYP2D6P10635 497 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 PMLP29590 882 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 NFX1Q12986 1120 aaKnown RBP10.73□□□□□ -0.69
CUL4A-212ENST00000617546 NTRK3Q16288 839 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 SUSD4Q5VX71 490 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 FAM213AQ9BRX8 229 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 MRPS26Q9BYN8 205 aaKnown RBP10.73□□□□□ -0.69
CUL4A-212ENST00000617546 NACA2Q9H009 215 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 TMEM117Q9H0C3 514 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 ADNPQ9H2P0 1102 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 POLD4Q9HCU8 107 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 ALG13Q9NP73 1137 aaKnown RBP10.73□□□□□ -0.69
CUL4A-212ENST00000617546 TEKT2Q9UIF3 430 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 AURKCQ9UQB9 309 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 LRRIQ1Q96JM4 1722 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 GOLGA8RI6L899 631 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 GSTT1P30711 240 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 ERFEQ4G0M1 354 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 COBLL1Q53SF7 1204 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 CWF19L1Q69YN2 538 aaKnown RBP10.73□□□□□ -0.69
CUL4A-212ENST00000617546 AAGABQ6PD74 315 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 PCMTD2Q9NV79 361 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 NAALADL1Q9UQQ1 740 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 MROH7Q68CQ1 1323 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 SLC16A4O15374 487 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 KLHL41O60662 606 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 CBFA2T3O75081 653 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 ALBP02768 609 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 FAM153BP0C7A2 387 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 PSMA4P25789 261 aaKnown RBP10.73□□□□□ -0.69
CUL4A-212ENST00000617546 IFNA8P32881 189 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 FDFT1P37268 417 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 CDK16Q00536 496 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 FAM153CQ494X1 144 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 WDR60Q8WVS4 1066 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 CCDC126Q96EE4 140 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 MTMR8Q96EF0 704 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 LXNQ9BS40 222 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 ILKAPQ9H0C8 392 aaPredicted RBP10.73□□□□□ -0.69
CUL4A-212ENST00000617546 THAP2Q9H0W7 228 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 MYLK2Q9H1R3 596 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 SEMA6BQ9H3T3 888 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 FAM53CQ9NYF3 392 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 CNGA2Q16280 664 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 METTL23Q86XA0 190 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 ATP8B4Q8TF62 1192 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 SNRNP27Q8WVK2 155 aaKnown RBP10.73□□□□□ -0.69
CUL4A-212ENST00000617546 EPB41L4AQ9HCS5 686 aaPredicted RBP10.73□□□□□ -0.69
CUL4A-212ENST00000617546 C20orf96Q9NUD7 363 aaPredicted RBP10.73□□□□□ -0.69
CUL4A-212ENST00000617546 KCNK4Q9NYG8 393 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 KIF20BQ96Q89 1820 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 KDM6AO15550 1401 aaPredicted RBP10.73□□□□□ -0.69
CUL4A-212ENST00000617546 AIM2O14862 343 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms