RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 CASP14P31944 242 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 ID4P47928 161 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 XKR4Q5GH76 650 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 DGKKQ5KSL6 1271 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 TBCELQ5QJ74 424 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 ITPRIPL1Q6GPH6 555 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 SERPINA13PQ6UXR4 307 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 ZFPM1Q8IX07 1006 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 KBTBD3Q8NAB2 608 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 AK8Q96MA6 479 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 GPR108Q9NPR9 543 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 A0A1W2PQ67 120 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 TCF7P36402 384 aaPredicted RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 ACVR2BQ13705 512 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 EFHC2Q5JST6 749 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 CNGA4Q8IV77 575 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 IQUBQ8NA54 791 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 ZSCAN10Q96SZ4 725 aaPredicted RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 USP44Q9H0E7 712 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 VCPKMTQ9H867 229 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 ZFP14Q9HCL3 533 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 PCDHA10Q9Y5I2 948 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 IDSB3KWA1 339 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 ASS1P00966 412 aaKnown RBP3.53□□□□□ -1.84
LPP-220ENST00000617246 IDSP22304 550 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 OXTRP30559 389 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 FLT3LGP49771 235 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 MED21Q13503 144 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 NPAS4Q8IUM7 802 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 VPS37AQ8NEZ2 397 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 RABGEF1Q9UJ41 708 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 UBQLN1Q9UMX0 589 aaKnown RBP3.53□□□□□ -1.84
LPP-220ENST00000617246 RASSF9O75901 435 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 COX7A2P14406 83 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 ADCYAP1R1P41586 468 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 ZNF699Q32M78 642 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 KLHL10Q6JEL2 608 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 KCTD17Q8N5Z5 321 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 TEX29Q8N6K0 151 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 SCAIQ8N9R8 606 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 DDI1Q8WTU0 396 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 ALG2Q9H553 416 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 C8orf33Q9H7E9 229 aaPredicted RBP3.53□□□□□ -1.84
LPP-220ENST00000617246 COG4Q9H9E3 785 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 KIAA1217Q5T5P2 1943 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 NRCAMQ92823 1304 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 ANXA6P08133 673 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 ATP2C1P98194 919 aaPredicted RBP3.53□□□□□ -1.84
LPP-220ENST00000617246 LSMEM2Q8N112 164 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 SPON2Q9BUD6 331 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 CARD14Q9BXL6 1004 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 MRPL47Q9HD33 250 aaKnown RBP3.53□□□□□ -1.84
LPP-220ENST00000617246 SUN2Q9UH99 717 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 GCATO75600 419 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 ADCY5O95622 1261 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 THP07101 528 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 ATXN8OSP0DMR3 200 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 ARP10275 920 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 MAP3K10Q02779 954 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 GBP6Q6ZN66 633 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 TMC2Q8TDI7 906 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 STAMBPL1Q96FJ0 436 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 VPS9D1Q9Y2B5 631 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 SYNDIG1LA6NDD5 238 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 CASKO14936 926 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 MT-ND3P03897 115 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 CDK4P11802 303 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 GAD2Q05329 585 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 MTFR2Q6P444 385 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 ZNF296Q8WUU4 475 aaPredicted RBP3.53□□□□□ -1.84
LPP-220ENST00000617246 TADA1Q96BN2 335 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 IL23AQ9NPF7 189 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 TLR9Q9NR96 1032 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 CAPN7Q9Y6W3 813 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 KRT33AO76009 404 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 IL1R1P14778 569 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 CSTF2P33240 577 aaKnown RBP eCLIP3.53□□□□□ -1.843e-6■■■□□ 18.5
LPP-220ENST00000617246 ILF2Q12905 390 aaKnown RBP3.53□□□□□ -1.84
LPP-220ENST00000617246 MTFR1Q15390 333 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 RASAL3Q86YV0 1011 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 UBALD2Q8IYN6 164 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 SEPT1Q8WYJ6 367 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 ABCF3Q9NUQ8 709 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 VTI1BQ9UEU0 232 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 PCDHB4Q9Y5E5 795 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 PCDHB2Q9Y5E7 798 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 GOLGA8IPA6NC78 632 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 CAP2P40123 477 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 SEPT2Q15019 361 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 NAALADL2Q58DX5 795 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 ARL14Q8N4G2 192 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 LMX1AQ8TE12 382 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 RAPGEF5Q92565 580 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 NXPE3Q969Y0 559 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 SYNJ2BP-COX16A0A087WUM0 186 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 PAPSS2O95340 614 aaPredicted RBP3.53□□□□□ -1.84
LPP-220ENST00000617246 CCDC102BQ68D86 513 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 TTC19Q6DKK2 380 aaPredicted RBP3.53□□□□□ -1.84
LPP-220ENST00000617246 SHQ1Q6PI26 577 aaKnown RBP3.53□□□□□ -1.84
LPP-220ENST00000617246 HERVK_113Q902F9 699 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms