RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 C19orf81C9J6K1 198 aa16.17■□□□□ 0.18
NOP56-220ENST00000616692 ENC1O14682 589 aa16.17■□□□□ 0.18
NOP56-220ENST00000616692 CBX5P45973 191 aa16.17■□□□□ 0.18
NOP56-220ENST00000616692 RESTQ13127 1097 aa16.17■□□□□ 0.18
NOP56-220ENST00000616692 SP140Q13342 867 aa16.17■□□□□ 0.18
NOP56-220ENST00000616692 IFNLR1Q8IU57 520 aaPredicted RBP16.17■□□□□ 0.18
NOP56-220ENST00000616692 RAVER1Q8IY67 606 aaKnown RBP16.17■□□□□ 0.18
NOP56-220ENST00000616692 DHRS9Q9BPW9 319 aa16.17■□□□□ 0.18
NOP56-220ENST00000616692 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.17■□□□□ 0.182e-22■■□□□ 13.9
NOP56-220ENST00000616692 DDX4Q9NQI0 724 aaKnown RBP16.17■□□□□ 0.18
NOP56-220ENST00000616692 RPTORQ8N122 1335 aa16.17■□□□□ 0.18
NOP56-220ENST00000616692 MAST2Q6P0Q8 1798 aa16.17■□□□□ 0.18
NOP56-220ENST00000616692 PDE2AO00408 941 aaPredicted RBP16.16■□□□□ 0.18
NOP56-220ENST00000616692 XRCC5P13010 732 aaKnown RBP16.16■□□□□ 0.18
NOP56-220ENST00000616692 HOXA7P31268 230 aaPredicted RBP16.16■□□□□ 0.18
NOP56-220ENST00000616692 PPARDQ03181 441 aa16.16■□□□□ 0.18
NOP56-220ENST00000616692 CDK18Q07002 472 aa16.16■□□□□ 0.18
NOP56-220ENST00000616692 ELMOD1Q8N336 334 aa16.16■□□□□ 0.18
NOP56-220ENST00000616692 PDZD8Q8NEN9 1154 aa16.16■□□□□ 0.18
NOP56-220ENST00000616692 MAML1Q92585 1016 aa16.16■□□□□ 0.18
NOP56-220ENST00000616692 RCOR1Q9UKL0 485 aa16.16■□□□□ 0.18
NOP56-220ENST00000616692 LRRC72A6NJI9 287 aa16.16■□□□□ 0.18
NOP56-220ENST00000616692 RXRAP19793 462 aa16.16■□□□□ 0.18
NOP56-220ENST00000616692 ADORA1P30542 326 aa16.16■□□□□ 0.18
NOP56-220ENST00000616692 CAP2P40123 477 aa16.16■□□□□ 0.18
NOP56-220ENST00000616692 RPS3AP61247 264 aaKnown RBP16.16■□□□□ 0.18
NOP56-220ENST00000616692 CCDC6Q16204 474 aa16.16■□□□□ 0.18
NOP56-220ENST00000616692 CARNMT1Q8N4J0 409 aa16.16■□□□□ 0.18
NOP56-220ENST00000616692 ELAC2Q9BQ52 826 aaKnown RBP16.16■□□□□ 0.18
NOP56-220ENST00000616692 USP29Q9HBJ7 922 aa16.16■□□□□ 0.18
NOP56-220ENST00000616692 NEK6Q9HC98 313 aa16.16■□□□□ 0.18
NOP56-220ENST00000616692 TCP11L1Q9NUJ3 509 aa16.16■□□□□ 0.18
NOP56-220ENST00000616692 GOLGA8MH3BSY2 632 aa16.15■□□□□ 0.18
NOP56-220ENST00000616692 CPLX1O14810 134 aa16.15■□□□□ 0.18
NOP56-220ENST00000616692 RBP3P10745 1247 aa16.15■□□□□ 0.18
NOP56-220ENST00000616692 ADSLP30566 484 aaPredicted RBP16.15■□□□□ 0.18
NOP56-220ENST00000616692 AGBL2Q5U5Z8 902 aa16.15■□□□□ 0.18
NOP56-220ENST00000616692 BBOF1Q8ND07 529 aa16.15■□□□□ 0.18
NOP56-220ENST00000616692 EPS8L3Q8TE67 593 aaKnown RBP16.15■□□□□ 0.18
NOP56-220ENST00000616692 BCL7CQ8WUZ0 217 aaPredicted RBP16.15■□□□□ 0.18
NOP56-220ENST00000616692 SOCS4Q8WXH5 440 aa16.15■□□□□ 0.18
NOP56-220ENST00000616692 AIFM3Q96NN9 605 aa16.15■□□□□ 0.18
NOP56-220ENST00000616692 MTRF1LQ9UGC7 380 aaKnown RBP16.15■□□□□ 0.18
NOP56-220ENST00000616692 GJD2Q9UKL4 321 aa16.15■□□□□ 0.18
NOP56-220ENST00000616692 MACROD2A1Z1Q3 448 aa16.15■□□□□ 0.18
NOP56-220ENST00000616692 TSPAN7P41732 249 aa16.15■□□□□ 0.18
NOP56-220ENST00000616692 PDE1AP54750 535 aa16.15■□□□□ 0.18
NOP56-220ENST00000616692 COG7P83436 770 aa16.15■□□□□ 0.18
NOP56-220ENST00000616692 KLHL30Q0D2K2 578 aa16.15■□□□□ 0.18
NOP56-220ENST00000616692 CETN1Q12798 172 aa16.15■□□□□ 0.18
NOP56-220ENST00000616692 ANO4Q32M45 955 aa16.15■□□□□ 0.18
NOP56-220ENST00000616692 CORO6Q6QEF8 472 aa16.15■□□□□ 0.18
NOP56-220ENST00000616692 SFR1Q86XK3 245 aa16.15■□□□□ 0.18
NOP56-220ENST00000616692 RIN3Q8TB24 985 aa16.15■□□□□ 0.18
NOP56-220ENST00000616692 NSUN4Q96CB9 384 aaKnown RBP16.15■□□□□ 0.18
NOP56-220ENST00000616692 DEFB118Q96PH6 123 aa16.15■□□□□ 0.18
NOP56-220ENST00000616692 UNKQ9C0B0 810 aaKnown RBP16.15■□□□□ 0.18
NOP56-220ENST00000616692 TRIM64A6NGJ6 449 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 TRIM64BA6NI03 449 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 HOXC13P31276 330 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 KPNA1P52294 538 aaPredicted RBP16.14■□□□□ 0.17
NOP56-220ENST00000616692 GALNT1Q10472 559 aaPredicted RBP16.14■□□□□ 0.17
NOP56-220ENST00000616692 KLHL38Q2WGJ6 581 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 MAP3K21Q5TCX8 1036 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 SLC30A10Q6XR72 485 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 FOXP4Q8IVH2 680 aaPredicted RBP16.14■□□□□ 0.17
NOP56-220ENST00000616692 SPATA5Q8NB90 893 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 FAM13CQ8NE31 585 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 PRPF31Q8WWY3 499 aaKnown RBP16.14■□□□□ 0.17
NOP56-220ENST00000616692 OSBP2Q969R2 916 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 HERC2P3Q9BVR0 1158 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 PLGRKTQ9HBL7 147 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 KMT5AQ9NQR1 393 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 FARSBQ9NSD9 589 aaKnown RBP16.14■□□□□ 0.17
NOP56-220ENST00000616692 OGDHLQ9ULD0 1010 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 VANGL2Q9ULK5 521 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 CAPN6Q9Y6Q1 641 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 TRIM75PA6NK02 468 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 GOLGA8BA8MQT2 603 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 SYCE1LA8MT33 242 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 MUSKO15146 869 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 RNGTTO60942 597 aaKnown RBP16.14■□□□□ 0.17
NOP56-220ENST00000616692 PPP2R2BQ00005 443 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 WDR72Q3MJ13 1102 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 SATL1Q86VE3 508 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 CPSF7Q8N684 471 aaKnown RBP16.14■□□□□ 0.17
NOP56-220ENST00000616692 NECAB1Q8N987 351 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 USP38Q8NB14 1042 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 ZNF512BQ96KM6 892 aaPredicted RBP16.14■□□□□ 0.17
NOP56-220ENST00000616692 ZNF184Q99676 751 aaPredicted RBP16.14■□□□□ 0.17
NOP56-220ENST00000616692 GDF15Q99988 308 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 HMX1Q9NP08 348 aaPredicted RBP16.14■□□□□ 0.17
NOP56-220ENST00000616692 TRNAU1APQ9NX07 287 aaKnown RBP16.14■□□□□ 0.17
NOP56-220ENST00000616692 PI4KBQ9UBF8 816 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 ERVK-11Q9UQG0 969 aa16.14■□□□□ 0.17
NOP56-220ENST00000616692 VILLO15195 856 aa16.13■□□□□ 0.17
NOP56-220ENST00000616692 OR6B1O95007 311 aa16.13■□□□□ 0.17
NOP56-220ENST00000616692 SHBGP04278 402 aa16.13■□□□□ 0.17
NOP56-220ENST00000616692 SLC3A2P08195 630 aaKnown RBP16.13■□□□□ 0.17
NOP56-220ENST00000616692 GZMAP12544 262 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms