RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 GNAT1P11488 350 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 JAG1P78504 1218 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 THOC5Q13769 683 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 SPARCL1Q14515 664 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 RFX8Q6ZV50 586 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 PRUNE1Q86TP1 453 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 RNF139Q8WU17 664 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 AFG1LQ8WV93 481 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 KLHL29Q96CT2 875 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 FDXACB1Q9BRP7 624 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 IFT122Q9HBG6 1241 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 HAUS2Q9NVX0 235 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 EIF4E1BA6NMX2 242 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 MUTP22033 750 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 PHLDB3Q6NSJ2 640 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 HIBCHQ6NVY1 386 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 MPZL3Q6UWV2 235 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 EMC1Q8N766 993 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 TSEN2Q8NCE0 465 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 AGR3Q8TD06 166 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 ACTRT1Q8TDG2 376 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 MAP3K20Q9NYL2 800 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 MYH13Q9UKX3 1938 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 CRYBG1Q9Y4K1 1723 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 KIAA0391O15091 583 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 HBP1O60381 514 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 IL18RAPO95256 599 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 C6orf222P0C671 652 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 ATXN8OSP0DMR3 200 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 ITGB5P18084 799 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 TAF1CQ15572 869 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 DGKDQ16760 1214 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 LRRC15Q8TF66 581 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 L1RE1Q9UN81 338 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 ZNF541Q9H0D2 1346 aa9.41□□□□□ -0.9
PDLIM5-222ENST00000615540 IGKV6D-41A0A0C4DH26 115 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 PIK3CDO00329 1044 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 TNPO2O14787 897 aaKnown RBP9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 TNFSF9P41273 254 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 TAP1Q03518 808 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 ACOT1Q86TX2 421 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 TTC13Q8NBP0 860 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 CFAP61Q8NHU2 1237 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 RAB3IL1Q8TBN0 382 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 AGAP3Q96P47 875 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 COL20A1Q9P218 1284 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 CPA4Q9UI42 421 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 STRCP1A6NGW2 1772 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 PYGMP11217 842 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 TMPRSS15P98073 1019 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 FOXR1Q6PIV2 292 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 SLC16A10Q8TF71 515 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 VPS11Q9H270 941 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 RIPK3Q9Y572 518 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 CAND2O75155 1236 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 GPD1P21695 349 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 GRIK1P39086 918 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 FBXW10Q5XX13 1052 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 TADA2BQ86TJ2 420 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 THEM5Q8N1Q8 247 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 KCNV2Q8TDN2 545 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 CCT8L2Q96SF2 557 aa9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 ASCC2Q9H1I8 757 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-222ENST00000615540 CST8O60676 142 aa9.4□□□□□ -0.91
PDLIM5-222ENST00000615540 CYP2C9P11712 490 aa9.4□□□□□ -0.91
PDLIM5-222ENST00000615540 LSP1P33241 339 aa9.4□□□□□ -0.91
PDLIM5-222ENST00000615540 CLK2P49760 499 aaKnown RBP9.4□□□□□ -0.91
PDLIM5-222ENST00000615540 PIGHQ14442 188 aaPredicted RBP9.4□□□□□ -0.91
PDLIM5-222ENST00000615540 JADE1Q6IE81 842 aa9.4□□□□□ -0.91
PDLIM5-222ENST00000615540 AFAP1L2Q8N4X5 818 aa9.4□□□□□ -0.91
PDLIM5-222ENST00000615540 PARK7Q99497 189 aaKnown RBP9.4□□□□□ -0.91
PDLIM5-222ENST00000615540 TRABDQ9H4I3 376 aa9.4□□□□□ -0.91
PDLIM5-222ENST00000615540 ITGB4P16144 1822 aa9.4□□□□□ -0.91
PDLIM5-222ENST00000615540 SPDYE16A6NNV3 312 aaPredicted RBP9.4□□□□□ -0.91
PDLIM5-222ENST00000615540 GSTA1P08263 222 aa9.4□□□□□ -0.91
PDLIM5-222ENST00000615540 GSTA2P09210 222 aa9.4□□□□□ -0.91
PDLIM5-222ENST00000615540 CETPP11597 493 aa9.4□□□□□ -0.91
PDLIM5-222ENST00000615540 SERPINB6P35237 376 aa9.4□□□□□ -0.91
PDLIM5-222ENST00000615540 MAPK7Q13164 816 aa9.4□□□□□ -0.91
PDLIM5-222ENST00000615540 KLHL38Q2WGJ6 581 aa9.4□□□□□ -0.91
PDLIM5-222ENST00000615540 CATSPERGQ6ZRH7 1159 aa9.4□□□□□ -0.91
PDLIM5-222ENST00000615540 KCTD17Q8N5Z5 321 aa9.4□□□□□ -0.91
PDLIM5-222ENST00000615540 TTC25Q96NG3 672 aa9.4□□□□□ -0.91
PDLIM5-222ENST00000615540 LBHD1Q9BQE6 289 aaPredicted RBP9.4□□□□□ -0.91
PDLIM5-222ENST00000615540 ITIH2P19823 946 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 ERFP50548 548 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 SESN2P58004 480 aaPredicted RBP9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 NT5DC3Q86UY8 548 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 HASPINQ8TF76 798 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 TMBIM4Q9HC24 238 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 SETD4Q9NVD3 440 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 CYP39A1Q9NYL5 469 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 ZFP69BQ9UJL9 534 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 UBIAD1Q9Y5Z9 338 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 UBR2Q8IWV8 1755 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 IQCA1LA6NCM1 817 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 PDHXO00330 501 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 ATP9BO43861 1147 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 ACTN3Q08043 901 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms