RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 JRKLQ9Y4A0 524 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 PCDHB4Q9Y5E5 795 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 PCDHB2Q9Y5E7 798 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 MRFAP1Q9Y605 127 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 CDY2AQ9Y6F7 541 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 GRIN2DO15399 1336 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 THSD7BQ9C0I4 1608 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 TRIP11Q15643 1979 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 UQCRHLA0A096LP55 91 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 ANKRD62A6NC57 917 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 TMCO5BA8MYB1 307 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 RTN2O75298 545 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 SLU7O95391 586 aaKnown RBP9.54□□□□□ -0.88
CCDC47-207ENST00000612558 ITGB3P05106 788 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 UQCRHP07919 91 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 KRT19P08727 400 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 TMEM253P0C7T8 217 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 GALCP54803 685 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 FMO1Q01740 532 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 ITGA7Q13683 1181 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 PTGISQ16647 500 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 TAF3Q5VWG9 929 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 PAPD7Q5XG87 772 aaKnown RBP9.54□□□□□ -0.88
CCDC47-207ENST00000612558 TMEM270Q6UE05 265 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 ALKAL1Q6UXT8 129 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 FAM228AQ86W67 206 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 CXorf38Q8TB03 319 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 CTNNBL1Q8WYA6 563 aaPredicted RBP9.54□□□□□ -0.88
CCDC47-207ENST00000612558 DDX1Q92499 740 aaKnown RBP9.54□□□□□ -0.88
CCDC47-207ENST00000612558 GLT1D1Q96MS3 346 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 TSPAN18Q96SJ8 248 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 SENP6Q9GZR1 1112 aaPredicted RBP9.54□□□□□ -0.88
CCDC47-207ENST00000612558 ISCUQ9H1K1 167 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 VRTNQ9H8Y1 702 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 ACP6Q9NPH0 428 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 SIX4Q9UIU6 781 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 CDC23Q9UJX2 597 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 ITGA11Q9UKX5 1188 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 NOC2LQ9Y3T9 749 aaKnown RBP9.54□□□□□ -0.88
CCDC47-207ENST00000612558 CAPN6Q9Y6Q1 641 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 UMODL1Q5DID0 1318 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 CENPFP49454 3210 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 CTIFO43310 598 aaKnown RBP9.53□□□□□ -0.88
CCDC47-207ENST00000612558 BUB1O43683 1085 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 RPS6KA5O75582 802 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 CHRNA1P02708 482 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 FTLP02792 175 aaPredicted RBP9.53□□□□□ -0.88
CCDC47-207ENST00000612558 MMEP08473 750 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 MMP16P51512 607 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 YWHAEP62258 255 aaKnown RBP9.53□□□□□ -0.88
CCDC47-207ENST00000612558 RBP5P82980 135 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 MGAT3Q09327 533 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 PTK7Q13308 1070 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 ZNF667Q5HYK9 610 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 UBXN11Q5T124 520 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 RNF19BQ6ZMZ0 732 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 PALB2Q86YC2 1186 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 UBR7Q8N806 425 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 RBBP8NLQ8NC74 664 aaPredicted RBP9.53□□□□□ -0.88
CCDC47-207ENST00000612558 ARRDC4Q8NCT1 418 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 WNT8BQ93098 351 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 SNX27Q96L92 541 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 PCDHB18PQ96TA0 734 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 BEGAINQ9BUH8 593 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 CHST12Q9NRB3 414 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 DPP3Q9NY33 737 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 TAS2R14Q9NYV8 317 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 CNTN3Q9P232 1028 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 ST3GAL5Q9UNP4 418 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 NOD1Q9Y239 953 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 HES2Q9Y543 173 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 TRIM17Q9Y577 477 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 PCDHGC5Q9Y5F6 944 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 PTCH2Q9Y6C5 1203 aa9.53□□□□□ -0.88
CCDC47-207ENST00000612558 ENC1O14682 589 aa9.52□□□□□ -0.89
CCDC47-207ENST00000612558 GPR182O15218 404 aa9.52□□□□□ -0.89
CCDC47-207ENST00000612558 PALMO75781 387 aa9.52□□□□□ -0.89
CCDC47-207ENST00000612558 RECQL4O94761 1208 aa9.52□□□□□ -0.89
CCDC47-207ENST00000612558 STAU1O95793 577 aaKnown RBP9.52□□□□□ -0.89
CCDC47-207ENST00000612558 ATP1A1P05023 1023 aaKnown RBP9.52□□□□□ -0.89
CCDC47-207ENST00000612558 CTSHP09668 335 aa9.52□□□□□ -0.89
CCDC47-207ENST00000612558 P4HA1P13674 534 aa9.52□□□□□ -0.89
CCDC47-207ENST00000612558 THPOP40225 353 aa9.52□□□□□ -0.89
CCDC47-207ENST00000612558 ASPAP45381 313 aa9.52□□□□□ -0.89
CCDC47-207ENST00000612558 NOP2P46087 812 aaKnown RBP9.52□□□□□ -0.89
CCDC47-207ENST00000612558 AMPD2Q01433 879 aa9.52□□□□□ -0.89
CCDC47-207ENST00000612558 ZBTB6Q15916 424 aa9.52□□□□□ -0.89
CCDC47-207ENST00000612558 WDR72Q3MJ13 1102 aa9.52□□□□□ -0.89
CCDC47-207ENST00000612558 TWF2Q6IBS0 349 aaKnown RBP9.52□□□□□ -0.89
CCDC47-207ENST00000612558 DNAAF5Q86Y56 855 aa9.52□□□□□ -0.89
CCDC47-207ENST00000612558 RFFLQ8WZ73 363 aa9.52□□□□□ -0.89
CCDC47-207ENST00000612558 CALR3Q96L12 384 aaKnown RBP9.52□□□□□ -0.89
CCDC47-207ENST00000612558 NXF3Q9H4D5 531 aaKnown RBP9.52□□□□□ -0.89
CCDC47-207ENST00000612558 FAM124BQ9H5Z6 455 aaPredicted RBP9.52□□□□□ -0.89
CCDC47-207ENST00000612558 CISHQ9NSE2 258 aa9.52□□□□□ -0.89
CCDC47-207ENST00000612558 NXF1Q9UBU9 619 aaKnown RBP9.52□□□□□ -0.89
CCDC47-207ENST00000612558 AGAP1Q9UPQ3 857 aa9.52□□□□□ -0.89
CCDC47-207ENST00000612558 SAR1BQ9Y6B6 198 aa9.52□□□□□ -0.89
CCDC47-207ENST00000612558 XPOTO43592 962 aaKnown RBP9.51□□□□□ -0.89
CCDC47-207ENST00000612558 CAND2O75155 1236 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms