RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 PRPF6O94906 941 aaKnown RBP12.48□□□□□ -0.41
LINC00539-204ENST00000608957 ABLIM3O94929 683 aa12.48□□□□□ -0.41
LINC00539-204ENST00000608957 SEC24AO95486 1093 aa12.48□□□□□ -0.41
LINC00539-204ENST00000608957 VNN2O95498 520 aa12.48□□□□□ -0.41
LINC00539-204ENST00000608957 HOXA9P31269 272 aa12.48□□□□□ -0.41
LINC00539-204ENST00000608957 ABCD1P33897 745 aa12.48□□□□□ -0.41
LINC00539-204ENST00000608957 HOXD13P35453 343 aa12.48□□□□□ -0.41
LINC00539-204ENST00000608957 PRCPP42785 496 aa12.48□□□□□ -0.41
LINC00539-204ENST00000608957 STK4Q13043 487 aa12.48□□□□□ -0.41
LINC00539-204ENST00000608957 PAK1Q13153 545 aa12.48□□□□□ -0.41
LINC00539-204ENST00000608957 NCAPHQ15003 741 aa12.48□□□□□ -0.41
LINC00539-204ENST00000608957 FAM26FQ5R3K3 315 aa12.48□□□□□ -0.41
LINC00539-204ENST00000608957 PPM1LQ5SGD2 360 aa12.48□□□□□ -0.41
LINC00539-204ENST00000608957 POTEHQ6S545 545 aa12.48□□□□□ -0.41
LINC00539-204ENST00000608957 OTOP3Q7RTS5 596 aa12.48□□□□□ -0.41
LINC00539-204ENST00000608957 BMP8AQ7Z5Y6 402 aa12.48□□□□□ -0.41
LINC00539-204ENST00000608957 GRASPQ7Z6J2 395 aaPredicted RBP12.48□□□□□ -0.41
LINC00539-204ENST00000608957 ADSSL1Q8N142 457 aa12.48□□□□□ -0.41
LINC00539-204ENST00000608957 PLCD3Q8N3E9 789 aa12.48□□□□□ -0.41
LINC00539-204ENST00000608957 ENOX1Q8TC92 643 aaKnown RBP12.48□□□□□ -0.41
LINC00539-204ENST00000608957 RSAD2Q8WXG1 361 aa12.48□□□□□ -0.41
LINC00539-204ENST00000608957 ANP32BQ92688 251 aaKnown RBP12.48□□□□□ -0.41
LINC00539-204ENST00000608957 SAAL1Q96ER3 474 aa12.48□□□□□ -0.41
LINC00539-204ENST00000608957 FAM84AQ96KN4 292 aa12.48□□□□□ -0.41
LINC00539-204ENST00000608957 ACCSQ96QU6 501 aa12.48□□□□□ -0.41
LINC00539-204ENST00000608957 PCDHB8Q9UN66 801 aa12.48□□□□□ -0.41
LINC00539-204ENST00000608957 NUB1Q9Y5A7 615 aa12.48□□□□□ -0.41
LINC00539-204ENST00000608957 TIMM13Q9Y5L4 95 aaPredicted RBP12.48□□□□□ -0.41
LINC00539-204ENST00000608957 MUC6Q6W4X9 2439 aa12.47□□□□□ -0.41
LINC00539-204ENST00000608957 OBSL1O75147 1896 aa12.47□□□□□ -0.41
LINC00539-204ENST00000608957 ANO9A1A5B4 782 aa12.47□□□□□ -0.41
LINC00539-204ENST00000608957 PSMA7O14818 248 aa12.47□□□□□ -0.41
LINC00539-204ENST00000608957 HNRNPA1P09651 372 aaKnown RBP eCLIP12.47□□□□□ -0.41
LINC00539-204ENST00000608957 GBP2P32456 591 aaPredicted RBP12.47□□□□□ -0.41
LINC00539-204ENST00000608957 TMEM132DQ14C87 1099 aa12.47□□□□□ -0.41
LINC00539-204ENST00000608957 LIN9Q5TKA1 542 aa12.47□□□□□ -0.41
LINC00539-204ENST00000608957 C9orf57Q5W0N0 161 aa12.47□□□□□ -0.41
LINC00539-204ENST00000608957 SLFN12LQ6IEE8 588 aa12.47□□□□□ -0.41
LINC00539-204ENST00000608957 ELMSAN1Q6PJG2 1045 aa12.47□□□□□ -0.41
LINC00539-204ENST00000608957 GET4Q7L5D6 327 aaPredicted RBP12.47□□□□□ -0.41
LINC00539-204ENST00000608957 ST13P5Q8NFI4 369 aaPredicted RBP12.47□□□□□ -0.41
LINC00539-204ENST00000608957 ITFG1Q8TB96 612 aa12.47□□□□□ -0.41
LINC00539-204ENST00000608957 NELFBQ8WX92 580 aa12.47□□□□□ -0.41
LINC00539-204ENST00000608957 POMGNT1Q8WZA1 660 aa12.47□□□□□ -0.41
LINC00539-204ENST00000608957 ACSF2Q96CM8 615 aaPredicted RBP12.47□□□□□ -0.41
LINC00539-204ENST00000608957 CBWD1Q9BRT8 395 aa12.47□□□□□ -0.41
LINC00539-204ENST00000608957 KCNK12Q9HB15 430 aa12.47□□□□□ -0.41
LINC00539-204ENST00000608957 PIDD1Q9HB75 910 aa12.47□□□□□ -0.41
LINC00539-204ENST00000608957 SLC39A2Q9NP94 309 aa12.47□□□□□ -0.41
LINC00539-204ENST00000608957 EPS15L1Q9UBC2 864 aa12.47□□□□□ -0.41
LINC00539-204ENST00000608957 DNMT3BQ9UBC3 853 aaKnown RBP12.47□□□□□ -0.41
LINC00539-204ENST00000608957 RWDD2AQ9UIY3 292 aa12.47□□□□□ -0.41
LINC00539-204ENST00000608957 MAPK8IP1Q9UQF2 711 aa12.47□□□□□ -0.41
LINC00539-204ENST00000608957 COL4A3Q01955 1670 aa12.47□□□□□ -0.41
LINC00539-204ENST00000608957 GOLGA8IPA6NC78 632 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 GOLGA8JA6NMD2 632 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 PIRO00625 290 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 NARSO43776 548 aaKnown RBP12.46□□□□□ -0.41
LINC00539-204ENST00000608957 POU2F2P09086 479 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 OR4Q2P0C623 313 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 VCPP55072 806 aaKnown RBP12.46□□□□□ -0.41
LINC00539-204ENST00000608957 ARPP19P56211 112 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 STX17P56962 302 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 LILRA4P59901 499 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 MTMR3Q13615 1198 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 CTXN3Q4LDR2 81 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 EPM2AIP1Q7L775 607 aaPredicted RBP12.46□□□□□ -0.41
LINC00539-204ENST00000608957 BRSK2Q8IWQ3 736 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 CD302Q8IX05 232 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 GUF1Q8N442 669 aaKnown RBP12.46□□□□□ -0.41
LINC00539-204ENST00000608957 BEST2Q8NFU1 509 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 ZNF461Q8TAF7 563 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 PBXIP1Q96AQ6 731 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 DHTKD1Q96HY7 919 aaPredicted RBP12.46□□□□□ -0.41
LINC00539-204ENST00000608957 MED15Q96RN5 788 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 TSPAN18Q96SJ8 248 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 TMEM209Q96SK2 561 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 FAM213AQ9BRX8 229 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 PCIF1Q9H4Z3 704 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 ASB7Q9H672 318 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 DERAQ9Y315 318 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 HCN4Q9Y3Q4 1203 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 PCDHB13Q9Y5F0 798 aa12.46□□□□□ -0.41
LINC00539-204ENST00000608957 PTPRDP23468 1912 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 ARHGEF37A1IGU5 675 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 H7C4K7 107 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 XPOTO43592 962 aaKnown RBP12.45□□□□□ -0.42
LINC00539-204ENST00000608957 OAZ2O95190 189 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 LAMP2P13473 410 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 ATF2P15336 505 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 GARTP22102 1010 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 FSHRP23945 695 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 PLCB2Q00722 1185 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 ALCAMQ13740 583 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 SLC5A9Q2M3M2 681 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 IER5LQ5T953 404 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 ZNF280DQ6N043 979 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 SARM1Q6SZW1 724 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 RNF19BQ6ZMZ0 732 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 UBALD2Q8IYN6 164 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms