RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 ZNF844Q08AG5 666 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 LDLRAD1Q5T700 205 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 ANKRD36BP1Q96IX9 119 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 PTPN18Q99952 460 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 SH3GL2Q99962 352 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 RAB17Q9H0T7 212 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 ZWILCHQ9H900 591 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 NOVA2Q9UNW9 492 aaKnown RBP16.89■□□□□ 0.29
CTSA-214ENST00000606788 DICER1Q9UPY3 1922 aaKnown RBP16.89■□□□□ 0.29
CTSA-214ENST00000606788 GRAP2O75791 330 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 SMPD1P17405 629 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 OGDHQ02218 1023 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 MCL1Q07820 350 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 TFDP1Q14186 410 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 DUPD1Q68J44 220 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 C1orf127Q8N9H9 656 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 MS4A4AQ96JQ5 239 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 PKNOX2Q96KN3 472 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 LPIN3Q9BQK8 851 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 SDCBP2Q9H190 292 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 SYNCQ9H7C4 482 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 CDHR5Q9HBB8 845 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 KCNG1Q9UIX4 513 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 HTTP42858 3142 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 GOLGA8KD6RF30 607 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 POLR2BP30876 1174 aaKnown RBP16.88■□□□□ 0.29
CTSA-214ENST00000606788 SEC24CP53992 1094 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 KRT17Q04695 432 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 SIX4Q9UIU6 781 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 IGKV6-21A0A0C4DH24 114 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 GH1P01241 217 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 MYZAPP0CAP1 466 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 TBXAS1P24557 533 aaPredicted RBP16.88■□□□□ 0.29
CTSA-214ENST00000606788 HADHBP55084 474 aaKnown RBP16.88■□□□□ 0.29
CTSA-214ENST00000606788 SIX1Q15475 284 aaPredicted RBP16.88■□□□□ 0.29
CTSA-214ENST00000606788 CDCA2Q69YH5 1023 aaPredicted RBP16.88■□□□□ 0.29
CTSA-214ENST00000606788 ZDHHC24Q6UX98 284 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 GPR142Q7Z601 462 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 MSL3Q8N5Y2 521 aaKnown RBP16.88■□□□□ 0.29
CTSA-214ENST00000606788 LRRC45Q96CN5 670 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 RRAGCQ9HB90 399 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 PCSK1NQ9UHG2 260 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 PNMA3Q9UL41 463 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 TTC7AQ9ULT0 858 aaPredicted RBP16.88■□□□□ 0.29
CTSA-214ENST00000606788 AGAP1Q9UPQ3 857 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 HCRTO43612 131 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 ACSL3O95573 720 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 IRAK1P51617 712 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 ADCY1Q08828 1119 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 CCDC38Q502W7 563 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 DNAJC24Q6P3W2 148 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 MAMDC4Q6UXC1 1216 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 CAPN12Q6ZSI9 719 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 SESTD1Q86VW0 696 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 NPLOC4Q8TAT6 608 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 XYLT2Q9H1B5 865 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 FZD8Q9H461 694 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 FAM114A2Q9NRY5 505 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 CYTH4Q9UIA0 394 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 LCMT1Q9UIC8 334 aa16.88■□□□□ 0.29
CTSA-214ENST00000606788 NR1D1P20393 614 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 ASPAP45381 313 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 CCNA1P78396 465 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 ZNF200P98182 395 aaPredicted RBP16.87■□□□□ 0.29
CTSA-214ENST00000606788 SGSM1Q2NKQ1 1148 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 WDTC1Q8N5D0 677 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 OR6J1Q8NGC5 347 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 ADAM33Q9BZ11 813 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 PPANQ9NQ55 473 aaKnown RBP16.87■□□□□ 0.29
CTSA-214ENST00000606788 GRHL1Q9NZI5 618 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 RASAL2Q9UJF2 1139 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 PROSCO94903 275 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 ERLIN2O94905 339 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 ZSCAN5DPP0CG00 497 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 ETS1P14921 441 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 CHRNA3P32297 505 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 CCT5P48643 541 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 SLC29A2Q14542 456 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 ZNF792Q3KQV3 632 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 ZNF667Q5HYK9 610 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 KCNV1Q6PIU1 500 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 TSHZ1Q6ZSZ6 1077 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 ERICH1Q86X53 443 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 C12orf29Q8N999 325 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 MDM1Q8TC05 714 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 ZC3H15Q8WU90 426 aaKnown RBP16.87■□□□□ 0.29
CTSA-214ENST00000606788 DDX27Q96GQ7 796 aaKnown RBP16.87■□□□□ 0.29
CTSA-214ENST00000606788 OSMRQ99650 979 aa16.87■□□□□ 0.29
CTSA-214ENST00000606788 DDX23Q9BUQ8 820 aaKnown RBP16.87■□□□□ 0.29
CTSA-214ENST00000606788 PPEF2O14830 753 aa16.86■□□□□ 0.29
CTSA-214ENST00000606788 MTA2O94776 668 aa16.86■□□□□ 0.29
CTSA-214ENST00000606788 ECEL1O95672 775 aa16.86■□□□□ 0.29
CTSA-214ENST00000606788 PHKA2P46019 1235 aa16.86■□□□□ 0.29
CTSA-214ENST00000606788 SYCP2LQ5T4T6 812 aa16.86■□□□□ 0.29
CTSA-214ENST00000606788 GSTA5Q7RTV2 222 aa16.86■□□□□ 0.29
CTSA-214ENST00000606788 JOSD2Q8TAC2 188 aa16.86■□□□□ 0.29
CTSA-214ENST00000606788 BCAS4Q8TDM0 211 aa16.86■□□□□ 0.29
CTSA-214ENST00000606788 RUBCNQ92622 972 aa16.86■□□□□ 0.29
CTSA-214ENST00000606788 L3MBTL3Q96JM7 780 aaPredicted RBP16.86■□□□□ 0.29
CTSA-214ENST00000606788 C2orf40Q9H1Z8 148 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms